nmnat1 (nmnat1)


Basic Information

Item Value
gene id nmnat1
gene name nmnat1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 23894213 ~ 23904039 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799305.1
acggataGAAGTTCTTTGGTGCGGCTCTCTTCTTCCTGGTCGAGTCTGTCCAATCAGATTTCTTATCTTAACGTAACGTCCGAACGTCGGAAGCAGGTAGAGCCTCTCATGGAGCAGttggctgctgctgtttctcCTGTGTAAACACAGCCCCACTATGAGGCATGGACGGTCAAAATATAACCAAAGTAGTCCTGCTGTCCTGCGGGTCCTTCAACCCCATCACCAACATGCACCTGAGGATGTTTGAACTGGCTCGAGATTATCTGGAAGACACAGGTCAGTACAGGGTGGTGAAAGGCATCATCTCTCCGGTGGGTGATGCCTATAAGAAGAAGGGTTTGATTGAGGCCTGCCACCGTCTGGAGATGGCCAGATTGTCCACAGAGAACTCAGACTGGATCACAGTAGATTCCTGGGAAAGCTTGCAGCCAGAGTGGGTGGAGACATGCAAAGTCATTCGGCATCACTATGACGAAATGCTTGCAGCAGAGCAGAACAACGATGACGTGGACACGGTCAAGTACGCAAAAAAGAGACGCATAGAGGAGAATTATTTTGAGGGTTCATCCTATCACAAAAGCAGAGACGGCCCTCAGCTAATGTTGCTGTGTGGGGCCGATGTCCTGGAGTCCTTTGGGGTCCCTAACTTGTGGAAGCAGGAGGATATCGCTGAGATTGTGGGCCGCTACGGTTTGGTTTGCATCAGCCGCAGCGGTAATGACCCCCACAAGTTCATCCACCAGTCAGACATGCTGTGGAAGTATCGCAAGAGCATCCACGTGGTCCAAGAATGGGTGACCAATGAGATCTCAGCCACTCACGTGCGCCGGTCGCTGCGTCGAGGGCGGAGCATCAGATACCTGCTCCCAGACAACGTGGTTGATTACATACAAGAGCACGGCCTCTACAGCGATGAGAGCGAGCGGAAAAATGCAGATGTAGTTCTAGCACCACTTGAGAGATACACGGGCGCCTCCTCAAGCTGAGGAAGTTCATTGCTGGAAAAACAGAGATGTAAGCTGTGTTTCTAAACTGAGAATCTAAAACAAATCTCCTACACAATTCAGACCACTAGTGCCTACTGTACAGAACAGTCTTTTCTAGTAATGGGTGTTGTTTTTTAAGAAGATAAATCTGCATAGACTATTCTGAGTGAAGTGATTTAGTAACAATTAAAGCAACGATATTTCTTGTGATTTGATGCCCCTACAGTCTCAGAGTGCAATTCACTTATACGCCGCTGTTGTAAATATGCACTGTGTCCAGCTGTGCATATTTACAACAGCGACGTAGCTGGACACAGTGCATTTGTTATGATTACATTACTCACGATCAAAAACTATCGAGCCGACAACATTGCTACAGCCAAACACTAAGCACGTGCAACAACGGAAGACACAGCAAGCCAACTAATATTACTTAGTCCAACAGCAAGATGGCCAGCTCAAAGTCTGTCTTGCAGCCTTTAATTCACGAAGCTCTCGCCAACGACTAAAAGCCGTCCGAGATTTACGTATGCCCGTTGGCCTCTTGCTCGGtcactctctccttttctcttcttaGCTTCCTCTGTCATTGCCCTCTTCGGTCTCTTTGCCTCTTCAATAATGTCCGTAGACGCTGCTGAATCAGGTTCTGTTGCATGCTCATCCGGCTCTGGTTCAAGCACGACGCCGCTCCCCGCCAGCTTCAAGCTGGTAAAATTTGTTGCATAatgttgcgtgtgtgtgggtgtagctGTGTGGTACAATagtcaaaaacacaataactgAGCAGCAGTTCAACCAGTTGGTGTGTGGTTATTGAACTAGGGATTCACAATTGTGTGTGAAGCAGTCAGCATACTGTGTGTTTGGTATTTCATGAAATATAATTTGAAACAAAttcattttagtctttttactTGCTTGCTTCAGCATACTCTCAACtcatcacattttattttttttacctagAGCAGGGTTTGTTCATGCACTCCCTCAGGCAAAAGAAGGCAATATAACTACTAGCTTATAATATGTTTACTTAGTGCTGCAGATTTGAAAGTGAAAGTGTGGTTGGTATTGATtggaaatgaaataaacaaCCCTCTTTGTTTTCCTCC
>XM_039799306.1
tacggataGAAGTTCTTTGGTGCGGCTCTCTTCTTCCTGGTCGAGTCTGTCCAATCAGATTTCTTATCTTAACGTAACGTCCGAACGTCGGAAGCAGGTAGAGCCTCTCATGGAGCAGttggctgctgctgtttctcCTGTGTAAACACAGCCCCACTATGAGGCATGGACGGTCAAAATATAACCAAAGTAGTCCTGCTGTCCTGCGGGTCCTTCAACCCCATCACCAACATGCACCTGAGGATGTTTGAACTGGCTCGAGATTATCTGGAAGACACAGGTCAGTACAGGGTGGTGAAAGGCATCATCTCTCCGGTGGGTGATGCCTATAAGAAGAAGGGTTTGATTGAGGCCTGCCACCGTCTGGAGATGGCCAGATTGTCCACAGAGAACTCAGACTGGATCACAGTAGATTCCTGGGAAAGCTTGCAGCCAGAGTGGGTGGAGACATGCAAAGTCATTCGGCATCACTATGACGAAATGCTTGCAGCAGAGCAGAACAACGATGACGTGGACACGGTCAAGTACGCAAAAAAGAGACGCATAGAGGAGAATTATTTTGAGGGTTCATCCTATCACAAAAGCAGAGACGGCCCTCAGCTAATGTTGCTGTGTGGGGCCGATGTCCTGGAGTCCTTTGGGGTCCCTAACTTGTGGAAGCAGGAGGATATCGCTGAGATTGTGGGCCGCTACGGTTTGGTTTGCATCAGCCGCAGCGGTAATGACCCCCACAAGTTCATCCACCAGTCAGACATGCTGTGGAAGTATCGCAAGAGCATCCACGTGGTCCAAGAATGGGTGACCAATGAGATCTCAGCCACTCACGTGCGCCGGTCGCTGCGTCGAGGGCGGAGCATCAGATACCTGCTCCCAGACAACGTGGTTGATTACATACAAGAGCACGGCCTCTACAGCGATGAGAGCGAGCGGAAAAATGCAGATGTAGTTCTAGCACCACTTGAGAGATACACGGGCGCCTCCTCAAGCTGAGGAAGTTCATTGCTGGAAAAACAGAGATCCTGTTTTCAGAACTCCTCACCAGCCCAGCAGCTTGAGGATCACATTTTATTCACACGCATCCcaggaggaaaggaagaaatAAAAAGGTCATCAAAATGCCAGCCAACCTCTG
>XM_039799307.1
cggataGAAGTTCTTTGGTGCGGCTCTCTTCTTCCTGGTCGAGTCTGTCCAATCAGATTTCTTATCTTAACGTAACGTCCGAACGTCGGAAGCAGTGTAAACACAGCCCCACTATGAGGCATGGACGGTCAAAATATAACCAAAGTAGTCCTGCTGTCCTGCGGGTCCTTCAACCCCATCACCAACATGCACCTGAGGATGTTTGAACTGGCTCGAGATTATCTGGAAGACACAGGTCAGTACAGGGTGGTGAAAGGCATCATCTCTCCGGTGGGTGATGCCTATAAGAAGAAGGGTTTGATTGAGGCCTGCCACCGTCTGGAGATGGCCAGATTGTCCACAGAGAACTCAGACTGGATCACAGTAGATTCCTGGGAAAGCTTGCAGCCAGAGTGGGTGGAGACATGCAAAGTCATTCGGCATCACTATGACGAAATGCTTGCAGCAGAGCAGAACAACGATGACGTGGACACGGTCAAGTACGCAAAAAAGAGACGCATAGAGGAGAATTATTTTGAGGGTTCATCCTATCACAAAAGCAGAGACGGCCCTCAGCTAATGTTGCTGTGTGGGGCCGATGTCCTGGAGTCCTTTGGGGTCCCTAACTTGTGGAAGCAGGAGGATATCGCTGAGATTGTGGGCCGCTACGGTTTGGTTTGCATCAGCCGCAGCGGTAATGACCCCCACAAGTTCATCCACCAGTCAGACATGCTGTGGAAGTATCGCAAGAGCATCCACGTGGTCCAAGAATGGGTGACCAATGAGATCTCAGCCACTCACGTGCGCCGGTCGCTGCGTCGAGGGCGGAGCATCAGATACCTGCTCCCAGACAACGTGGTTGATTACATACAAGAGCACGGCCTCTACAGCGATGAGAGCGAGCGGAAAAATGCAGATGTAGTTCTAGCACCACTTGAGAGATACACGGGCGCCTCCTCAAGCTGAGGAAGTTCATTGCTGGAAAAACAGAGATGTAAGCTGTGTTTCTAAACTGAGAATCTAAAACAAATCTCCTACACAATTCAGACCACTAGTGCCTACTGTACAGAACAGTCTTTTCTAGTAATGGGTGTTGTTTTTTAAGAAGATAAATCTGCATAGACTATTCTGAGTGAAGTGATTTAGTAACAATTAAAGCAACGATATTTCTTGTGATTTGATGCCCCTACAGTCTCAGAGTGCAATTCACTTATACGCCGCTGTTGTAAATATGCACTGTGTCCAGCTGTGCATATTTACAACAGCGACGTAGCTGGACACAGTGCATTTGTTATGATTACATTACTCACGATCAAAAACTATCGAGCCGACAACATTGCTACAGCCAAACACTAAGCACGTGCAACAACGGAAGACACAGCAAGCCAACTAATATTACTTAGTCCAACAGCAAGATGGCCAGCTCAAAGTCTGTCTTGCAGCCTTTAATTCACGAAGCTCTCGCCAACGACTAAAAGCCGTCCGAGATTTACGTATGCCCGTTGGCCTCTTGCTCGGtcactctctccttttctcttcttaGCTTCCTCTGTCATTGCCCTCTTCGGTCTCTTTGCCTCTTCAATAATGTCCGTAGACGCTGCTGAATCAGGTTCTGTTGCATGCTCATCCGGCTCTGGTTCAAGCACGACGCCGCTCCCCGCCAGCTTCAAGCTGGTAAAATTTGTTGCATAatgttgcgtgtgtgtgggtgtagctGTGTGGTACAATagtcaaaaacacaataactgAGCAGCAGTTCAACCAGTTGGTGTGTGGTTATTGAACTAGGGATTCACAATTGTGTGTGAAGCAGTCAGCATACTGTGTGTTTGGTATTTCATGAAATATAATTTGAAACAAAttcattttagtctttttactTGCTTGCTTCAGCATACTCTCAACtcatcacattttattttttttacctagAGCAGGGTTTGTTCATGCACTCCCTCAGGCAAAAGAAGGCAATATAACTACTAGCTTATAATATGTTTACTTAGTGCTGCAGATTTGAAAGTGAAAGTGTGGTTGGTATTGATtggaaatgaaataaacaaCCCTCTTTGTTTTCCTCC

Function

symbol description
nmnat1 Predicted to enable nicotinamide-nucleotide adenylyltransferase activity and nicotinate-nucleotide adenylyltransferase activity. Predicted to be involved in NAD biosynthetic process. Predicted to act upstream of or within pyridine nucleotide biosynthetic process. Predicted to be active in nucleus. Is expressed in several structures, including Kupffer's vesicle; forerunner cell group; heart; liver; and yolk syncytial layer. Human ortholog(s) of this gene implicated in Leber congenital amaurosis 9 and spondyloepiphyseal dysplasia, sensorineural hearing loss, intellectual developmental disorder, and Leber congenital amaurosis. Orthologous to human NMNAT1 (nicotinamide nucleotide adenylyltransferase 1).

NR:

description
PREDICTED: nicotinamide/nicotinic acid mononucleotide adenylyltransferase 1

GO:

id name namespace
GO:0009435 NAD biosynthetic process biological_process
GO:0016779 nucleotidyltransferase activity molecular_function

KEGG:

id description
K06210 NMNAT; nicotinamide mononucleotide adenylyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799305.1 True 2107 mRNA 0.46 5 23894214 23900465
XM_039799306.1 False 1132 mRNA 0.51 6 23894213 23904039
XM_039799307.1 False 2063 mRNA 0.46 5 23894215 23900465

Neighbor

gene id symbol gene type direction distance location
clstn1 clstn1 coding upstream 3240 23849614 ~ 23890973 (+)
pik3cd pik3cd,LOC104956376 coding upstream 105120 23770631 ~ 23789093 (+)
foxl2l NA coding upstream 148747 23744072 ~ 23745466 (+)
plekhn1 plekhn1 coding upstream 265293 23613688 ~ 23628920 (+)
klhl17 klhl17,LOC106572137 coding upstream 292565 23588381 ~ 23601648 (+)
ube4b ube4b coding downstream 2861 23906900 ~ 23927466 (+)
kif1b kif1b coding downstream 24427 23928466 ~ 23993692 (+)
pgd pgd coding downstream 90907 23994946 ~ 24001436 (+)
c5h1orf127 LOC104954118 coding downstream 109850 24013889 ~ 24020924 (+)
casz1 casz1 coding downstream 300336 24204375 ~ 24253787 (+)
G52611 NA non-coding upstream 56251 23837692 ~ 23837962 (+)
G52604 NA non-coding upstream 103691 23789448 ~ 23790522 (+)
G52569 NA non-coding upstream 206852 23686352 ~ 23687361 (+)
G52509 NA non-coding upstream 446656 23447353 ~ 23447557 (+)
LOC120558323 NA non-coding upstream 619018 23265231 ~ 23275195 (+)
G52628 tardbp,LOC106566965 non-coding downstream 105757 24009796 ~ 24011101 (+)
G52629 NA non-coding downstream 108924 24012963 ~ 24013301 (+)
LOC120558580 NA non-coding downstream 157024 24061063 ~ 24074008 (+)
G52728 NA non-coding downstream 366082 24270121 ~ 24274036 (+)
G52742 NA non-coding downstream 456767 24360806 ~ 24362267 (+)
ctnnbip1 ctnnbip1 other upstream 79807 23791447 ~ 23814406 (+)
tmem201 tmem201,LOC102777799 other upstream 129048 23746365 ~ 23765165 (+)
atxn7l2b kcnc4 other upstream 825734 22991252 ~ 23068479 (+)
lamtor5 lamtor5,LOC102787529 other upstream 1047275 22842044 ~ 22846938 (+)
LOC120559933 NA other upstream 1331692 22562154 ~ 22562521 (+)
LOC120559118 LOC102791662 other downstream 1036756 24940795 ~ 24945320 (+)
G52871 LOC104956590 other downstream 1049403 24953442 ~ 24957330 (+)
tprg1l tprg1l,LOC102784883,LOC106513028 other downstream 1839550 25743589 ~ 25748321 (+)
G53096 ybx1 other downstream 2167546 26071585 ~ 26076664 (+)
G53232 LOC104966952,LOC103362776,LOC102800046,LOC102208894 other downstream 2448421 26352460 ~ 26353463 (+)

Expression


Co-expression Network