igf3 (LOC108228312)


Basic Information

Item Value
gene id igf3
gene name LOC108228312
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 36581523 ~ 36588712 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799312.1
CCAGATGAGATTGGAGTGTGAAACAATGTGCGGAGGAGCAGTGCGGGGAGGAAACCTCAGCGCTGTGGTCCTGCCCTCCTGCTGCCAGACTATAAAACTCAAGTTCTCCTGGAGTCGGTCCACTCCACACAGACAAGATGCACTCCTCTTGCTGCCCTTCTGCCACGCCACACACACTGAAGGTGTTGTGTGTTCGGATGTGTATGTTCTACTCCACCATGTGTCTGGCAGGCTGGCCGCTGTCCTCAGAGGCAGCCAGACTCCGCTGTGGGACTGATCTCCTCAGTGATCTCATATTTGTGTGTGGGGATCGTGGAATCTATTTAGgtaaAGGTTCGTGGTCTGGTTACGGTTCTCGGCCCAGAGGGAAAGGGATAGTGGACCAGTGctgtcggccgtctggttgtgAACTTCAGCATCTGGAGATGTACTGTGCCAAACCAAAGAGCCAGCAGCAAACCACAGCttacccaacaacaacaaccaccccCACCACAGCACCTCAGACCACAGCACAGCTAGACACGGCTCAGCAGTTCCAAGCACTGTTTCagaaaagactttctgagcacATGGGGGCCCCCGACAGTCCAAAGAGGGACGCTTACAGAAAGAAGACTGAGCCTTCCCTCCGACAGCAAAGCAAAGTTTCACCGTCACGCAAGAGGATTAAATCACGGAACCCAACCAACATGCCACCGTTAACCTCCGGGAGTTCCCTTCAAACAATGATGACACATGAATCATGACCTTTGacctcattaaaaaaaaacaaaaaaaaaaaacctgagacTGATGCAGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799312.1 True 802 mRNA 0.52 4 36581523 36588712

Neighbor

gene id symbol gene type direction distance location
plch2a plch2,LOC106935153 coding downstream 133731 36272871 ~ 36447792 (-)
LOC120559648 LOC103362257,LOC106633114,LOC101486280 coding downstream 311498 36253176 ~ 36270025 (-)
flna LOC100702302 coding downstream 1197294 35311194 ~ 35384229 (-)
emd NA coding downstream 1277508 35298496 ~ 35304015 (-)
mrpl49 NA coding downstream 1294313 35286360 ~ 35287210 (-)
si:dkeyp-110g5.4 NA coding upstream 10861 36599573 ~ 36606768 (-)
lrif1 NA coding upstream 21425 36610137 ~ 36625969 (-)
stk35 LOC105921027,LOC108249422 coding upstream 191589 36780301 ~ 36804670 (-)
gmeb2 gmeb2,LOC102776727 coding upstream 262138 36850850 ~ 36866302 (-)
plod1a NA coding upstream 314365 36903077 ~ 36952279 (-)
G55670 NA non-coding downstream 29636 36544954 ~ 36551887 (-)
G55666 NA non-coding downstream 38888 36540534 ~ 36542635 (-)
G55658 NA non-coding downstream 69865 36511359 ~ 36511658 (-)
G55602 NA non-coding downstream 496657 36084517 ~ 36084866 (-)
G55599 NA non-coding downstream 498190 36083086 ~ 36083333 (-)
G55664 NA non-coding upstream 4526 36593238 ~ 36595825 (-)
G55662 NA non-coding upstream 5513 36594225 ~ 36598272 (-)
G56162 NA non-coding upstream 25865 36614577 ~ 36615851 (-)
G56167 NA non-coding upstream 69177 36657889 ~ 36699601 (-)
G56155 NA non-coding upstream 94928 36683640 ~ 36712643 (-)
LOC120559361 NA other downstream 21564 36557530 ~ 36559959 (-)
si:ch73-70k4.1 NA other downstream 682787 35874622 ~ 35898736 (-)
G55492 NA other downstream 1171757 35404604 ~ 35409766 (-)
LOC120559165 NA other downstream 1303669 35269896 ~ 35277854 (-)
ntsr1 ntsr1,LOC103361890,LOC104959625 other downstream 2290454 34236566 ~ 34291069 (-)
G56160 NA other upstream 93187 36681899 ~ 36724209 (-)
LOC120559655 mtch1,LOC102799640 other upstream 134526 36723238 ~ 36744132 (-)
rhoaa LOC106529366,LOC107558917,LOC102777028,LOC107687289,LOC103367639,LOC107599000,LOC103384870,LOC106572042 other upstream 296091 36884803 ~ 36895540 (-)
phc2a LOC103367632,LOC102778931,LOC100708466,LOC102197996 other upstream 396173 36984885 ~ 37001151 (-)
G56335 NA other upstream 783923 37372635 ~ 37373316 (-)

Expression


Co-expression Network