zgc:103759 (LOC104952901,LOC101466673,LOC100706292,LOC102192048)


Basic Information

Item Value
gene id zgc:103759
gene name LOC104952901,LOC101466673,LOC100706292,LOC102192048
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 33016489 ~ 33021344 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799351.1
GTTTTAATACAAGTCACACAGATGATCTTCCTTTAAGCTTCCTGGTTCTGCATAGCCTTCCCCAAGCTTTTCTGCATACAAGCCCACAGGCCTTCAAAGCTAATCAtTGTAGATGGCGAGTGGACAGCTGTCGAGGGCGGAGGCGTTGGCGTGCTCAGGCTGCAGGCATGCATGTCATGTGATGCTCTACTGTGACACGAaaagtcagctgtttgggagACTTCCTATCAGGCATATCATACTGATGCAAATGCGCTTTGACGGTCTGCTGGGTTTCCCTGGAGGGTTCGTCAAACCATCGGAGGAGACCCTGGAGGCGGGGCTTAGCAGGGAGTTGTTGGAGGAGCTGGGTGTAGCTCTTCCTATATCGGTGGAAGACCATGCGGACTCTTGCTATGCCCCTGCTTCCtcacactcctcctcctccccgtcGTCACGTCTTATCACTCACTTCTACGTGaagaagatggaggaggagCAGATTAAAGAGGTGGAGAGAGCGGCTGCATCCATTGCAACAGATCATGGACAGgaggttCTAGGAATGGTCAGAGTCCCTCTGTACACCACGAAAGGTGGGGGAGGCCTCGCGGCTTTCCTGTCACACTCGTTCATCGGTAATGCTCGCTCGCAGCTGGCCGACTCTCTGCTGCGTCTCAACCTGGTTGCCCCTGAGGAGTTGCATAAAGCCCTCACACGCTCTCtgaagatacacacacacacctcagaggACCTGCAAGTGGCCTTTGCGCTAACGGAGGCAAAGAGGAAACGGTTTTGAAACACATCTgcacatcctctccagcacacacatagatacagtTTGCCTATCGGCAATGTTTAACACAATCCTTCACTCACACACTTaatcctaaacacacacacacacacactgatactgATTCTGAGCTGGTGACTCATAATTGCCTCATGCATCAAACAGTTTAGGAGAAAACATTATCAACTGCTCCATTATTAATACGAATAAAATCATTTAACTGTC
>XM_039799352.1
TCCCCAAGCTTTTCTGCATACAAGCCCACAGGCCTTCAAAGCTAATCAGTAGGTTTCAGTCAGGTCTGCTAACTCAGCATATGAGATGAGATAAAAACAAAGAGATCAAGTGTGTTTGGATGCAGTCACATTGGCAGCACGTGACCttaattttactgtctatgcACGTGACAAGGGGGCAGCCATGCAGAGTGATCAGTTAGCACTGAACTGTGCCTGTGTAattttgcagtgtgtttgtgtgtatagtTGTAGATGGCGAGTGGACAGCTGTCGAGGGCGGAGGCGTTGGCGTGCTCAGGCTGCAGGCATGCATGTCATGTGATGCTCTACTGTGACACGAaaagtcagctgtttgggagACTTCCTATCAGGCATATCATACTGATGCAAATGCGCTTTGACGGTCTGCTGGGTTTCCCTGGAGGGTTCGTCAAACCATCGGAGGAGACCCTGGAGGCGGGGCTTAGCAGGGAGTTGTTGGAGGAGCTGGGTGTAGCTCTTCCTATATCGGTGGAAGACCATGCGGACTCTTGCTATGCCCCTGCTTCCtcacactcctcctcctccccgtcGTCACGTCTTATCACTCACTTCTACGTGaagaagatggaggaggagCAGATTAAAGAGGTGGAGAGAGCGGCTGCATCCATTGCAACAGATCATGGACAGgaggttCTAGGAATGGTCAGAGTCCCTCTGTACACCACGAAAGGTGGGGGAGGCCTCGCGGCTTTCCTGTCACACTCGTTCATCGGTAATGCTCGCTCGCAGCTGGCCGACTCTCTGCTGCGTCTCAACCTGGTTGCCCCTGAGGAGTTGCATAAAGCCCTCACACGCTCTCtgaagatacacacacacacctcagaggACCTGCAAGTGGCCTTTGCGCTAACGGAGGCAAAGAGGAAACGGTTTTGAAACACATCTgcacatcctctccagcacacacatagatacagtTTGCCTATCGGCAATGTTTAACACAATCCTTCACTCACACACTTaatcctaaacacacacacacacacactgatactgATTCTGAGCTGGTGACTCATAATTGCCTCATGCATCAAACAGTTTAGGAGAAAACATTATCAACTGCTCCATTATTAATACGAATAAAATCATTTAACTGTC

Function

NR:

description
U8 snoRNA-decapping enzyme-like

GO:

id name namespace
GO:0008152 metabolic process biological_process
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K16855 NUDT16; U8 snoRNA-decapping enzyme

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799351.1 False 1003 mRNA 0.50 5 33016489 33021344
XM_039799352.1 True 1146 mRNA 0.50 4 33016489 33021286

Neighbor

gene id symbol gene type direction distance location
arhgap4b LOC103371877,LOC102798993,LOC102215860 coding downstream 1640 32972595 ~ 33014849 (-)
fam50a fam50a coding downstream 50725 32950105 ~ 32965764 (-)
si:ch211-207e14.4 NA coding downstream 66507 32934467 ~ 32949982 (-)
sars1 sars coding downstream 83475 32910758 ~ 32933014 (-)
LOC120559545 NA coding downstream 88950 32923850 ~ 32927539 (-)
pim1 pim1,LOC102786254,LOC100704168,LOC102192917 coding upstream 47541 33068885 ~ 33073078 (-)
LOC120559907 NA coding upstream 200120 33221464 ~ 33240428 (-)
LOC120559885 NA coding upstream 249788 33271132 ~ 33294480 (-)
LOC120559567 klhdc8b coding upstream 302461 33323805 ~ 33470306 (-)
si:dkey-32e6.3 NA coding upstream 487344 33508688 ~ 33524809 (-)
G54735 NA non-coding downstream 327851 32688205 ~ 32688638 (-)
G54734 NA non-coding downstream 329875 32683360 ~ 32686614 (-)
G54733 NA non-coding downstream 333973 32682162 ~ 32682516 (-)
G54731 NA non-coding downstream 341024 32675265 ~ 32675465 (-)
G54724 NA non-coding downstream 418996 32596572 ~ 32597493 (-)
LOC120558525 NA non-coding upstream 152522 33173866 ~ 33183318 (-)
LOC120558313 NA non-coding upstream 286787 33308131 ~ 33308924 (-)
G54922 NA non-coding upstream 297476 33318820 ~ 33319024 (-)
G54947 NA non-coding upstream 483469 33504813 ~ 33507223 (-)
G54949 NA non-coding upstream 486090 33507434 ~ 33508423 (-)
zgc:158296 NA other downstream 45326 32966635 ~ 32971163 (-)
G54834 NA other downstream 129199 32880193 ~ 32887290 (-)
G54756 LOC107088573,LOC106566972 other downstream 243003 32767357 ~ 32773486 (-)
LOC120559593 plxnb1,LOC103373813,LOC107100289 other downstream 350030 32590983 ~ 32666459 (-)
LOC120558955 LOC104919264,LOC102777709,LOC100695043,LOC102209489,LOC103373809,LOC103152775,LOC101470785,LOC106963186 other downstream 693214 32292942 ~ 32323275 (-)
lamb2 NA other upstream 534456 33555800 ~ 33614940 (-)
G55124 fam110a,LOC104960682 other upstream 1002674 34024018 ~ 34127495 (-)
G55131 NA other upstream 1066626 34087970 ~ 34093118 (-)
ntsr1 ntsr1,LOC103361890,LOC104959625 other upstream 1215222 34236566 ~ 34291069 (-)
LOC120559165 NA other upstream 2248552 35269896 ~ 35277854 (-)

Expression


Co-expression Network