LOC120558557


Basic Information

Item Value
gene id LOC120558557
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 42284636 ~ 42309616 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799603.1
AGAGGGCGTGGCAGTGAGACGAGCAGCAGGTTAGTAGTTAAGAAGAGTCCCCACCTCCACCCTTCTTCTTCGGCTTCAGGAAGCGGAGTTTCAGCAGCACGGCACACGTCGACCCTCAGCTCACCTGAACAGTTCAACCATGAGGTGGCGCTCTCCttgtcttcctctcctcctcttctctctcctcgcTCTGTCGCTCGCAGGAGATGAAGATTTCAAGATCTGCTCCTACAACGTGCAGGGATTCAACCTCGACAAATCACGGGACTACAGAGTACTGCACACTCTCACACGGattGCGTCTCGTTGTGATATCTGTCTCCTGCTGCATGTGACAGATTTTGACGGTAAAGGCATCCAAGCGCTGCTGGACTCTCTCAACAGGGCGACCGACAGGTATGACGGCTACACCTACCAATCAGTGGCCAGTAAGAGTCTGGGGCCTGACCCTGAGGACATGCAGCAGTACGTTTTCCTCTACAGGACAGACACGGTGAATGTGACGGGTCAGTATCAGTACCAGAAGCCCGACTCCTTCGTCAGACCGCCGTTTGCTGTTCAGTTCTACAGCGCCAAAACTGCGATCAAGTCCTTTATTCTGATTCCTCTGCACTCGGACCCGAGCCGGGCGGTCCAGGAGATCGACCGGCTCTACGACGTCTTCCAGGAAGTCAGCAAGAAGTGGAGCAACAAGaacgtGATGCTCCTGGGAGATTTCCATGCTGCCTGTGCCTACGTGACCCGAGACGATAAGCGAGACATCCGTCTGTACACCAACTCAGCGTTCGCCTGGCTGATTGGTGACCGGGTGGACACCACCGTCTCCGAGGAAACCAACTGTGCTTTTGACAGgatCGTGGTACATGGTAAAACCTTCCTGAAGGCCATCACTCCATTCTCTGCACAAGTCTACAACTACGCCGAAGATTTAAAAATCCCCAGGGCCAAgGCGGTGGGAATCAGTGACCACTTACCTGTGGAGGTGGATCTGAAGGGCTCCGCCCCTCTGCTGCAGGCCACGCCCCTCCTCATCCTGCTCAGCGTCTCTGCCGTCCTGCAGCACTTCCTGTCGGCttcagtaatctgattactctgAGGGATCTTCAGTATCTCCTTATCATATCCACATAAATGAAGCtgtttccgtttttttttttctattactAACTATTATCTTGTGTGTGTTCACGACTTCCTGACTTTATTATCTGAAGACAACAAACACTGATCACTTCCTGTGTAGATTatcttcttctctccttttttatTCTTCAGAGAGGCCCATCACAGTAAAATAAGTTTACGAATCCTACTACAGCCACTCCAaggcccgcccttcaatagcagcctgattggttggggttaggcattgaccttgagtggttaaggttaggacagctgattggtcaggagACCTGAACAGGTCAGgtgacgcctggccaataaatgctactgaagggcgggtcttggcgtggccgtagtaggattcgtaaatttgctcCAAACGGCCAGAGCTGACCGTATGCCGTAAACGGGCAGTAACACCCCCGATGAGACGCAGGTTCtgaatgtgctgtatacatgtccaaagaatgcctctaaaaccggaataataccagaatatcACACAAGTCTTCATCAGACAATGTTATTATATAGAGAATATCTAAATGAAATATGATGTGTACATCAGACTCTGGgtattagtggaatattaatGTGTAAACACACGGCCGATTTCTTCTCTAAACGCTTCACAGAGAAAGCCTCCTGGTGCCAAATACTGTTCAGTGTTTATTGATTGGGAATCAGGACAATCTGAGCAGAAGTTTTTACCCAGAGTGCCTTTCAGCAACGTTAGTGCATCAATACTTTTTAATTCAAACTACCGATTATGTTCACGGTggattaatgtgtggattatgttctggatgaatggatgagttgtttAGTCTCtcaaatgtggatcagtgtttcctaaaagcccaagatgacgtcttcACATGTCTGGTTttatccacaactcaaagatcttcagtttcctgtcccagaggagagaagatacTAGAAAGTATTCATATTTAAAAGGTAATTTCATGATTGTTTTCATCACCCtggactctctgtctccatgtgtgagtgtctgagtgtctgatggaacaacaatctgtgaacctggtccagtattaaaccagaacccagctgtaatgtaaccctacaggactaatgttcag
>XM_039799604.1
AGAGGGCGTGGCAGTGAGACGAGCAGCAGGTTAGTAGTTAAGAAGAGTCCCCACCTCCACCCTTCTTCTTCGGCTTCAGGAAGCGGAGTTTCAGCAGCACGGCACACGTCGACCCTCAGCTCACCTGAACAGTTCAACCATGAGGTGGCGCTCTCCttgtcttcctctcctcctcttctctctcctcgcTCTGTCGCTCGCAGGAGATGAAGATTTCAAGATCTGCTCCTACAACGTGCAGGGATTCAACCTCGACAAATCACGGGACTACAGAGTACTGCACACTCTCACACGGattGCGTCTCGTTGTGATATCTGTCTCCTGCTGCATGTGACAGATTTTGACGGTAAAGGCATCCAAGCGCTGCTGGACTCTCTCAACAGGTATGACGGCTACACCTACCAATCAGTGGCCAGTAAGAGTCTGGGGCCTGACCCTGAGGACATGCAGCAGTACGTTTTCCTCTACAGGACAGACACGGTGAATGTGACGGGTCAGTATCAGTACCAGAAGCCCGACTCCTTCGTCAGACCGCCGTTTGCTGTTCAGTTCTACAGCGCCAAAACTGCGATCAAGTCCTTTATTCTGATTCCTCTGCACTCGGACCCGAGCCGGGCGGTCCAGGAGATCGACCGGCTCTACGACGTCTTCCAGGAAGTCAGCAAGAAGTGGAGCAACAAGaacgtGATGCTCCTGGGAGATTTCCATGCTGCCTGTGCCTACGTGACCCGAGACGATAAGCGAGACATCCGTCTGTACACCAACTCAGCGTTCGCCTGGCTGATTGGTGACCGGGTGGACACCACCGTCTCCGAGGAAACCAACTGTGCTTTTGACAGgatCGTGGTACATGGTAAAACCTTCCTGAAGGCCATCACTCCATTCTCTGCACAAGTCTACAACTACGCCGAAGATTTAAAAATCCCCAGGGCCAAgGCGGTGGGAATCAGTGACCACTTACCTGTGGAGGTGGATCTGAAGGGCTCCGCCCCTCTGCTGCAGGCCACGCCCCTCCTCATCCTGCTCAGCGTCTCTGCCGTCCTGCAGCACTTCCTGTCGGCttcagtaatctgattactctgAGGGATCTTCAGTATCTCCTTATCATATCCACATAAATGAAGCtgtttccgtttttttttttctattactAACTATTATCTTGTGTGTGTTCACGACTTCCTGACTTTATTATCTGAAGACAACAAACACTGATCACTTCCTGTGTAGATTatcttcttctctccttttttatTCTTCAGAGAGGCCCATCACAGTAAAATAAGTTTACGAATCCTACTACAGCCACTCCAaggcccgcccttcaatagcagcctgattggttggggttaggcattgaccttgagtggttaaggttaggacagctgattggtcaggagACCTGAACAGGTCAGgtgacgcctggccaataaatgctactgaagggcgggtcttggcgtggccgtagtaggattcgtaaatttgctcCAAACGGCCAGAGCTGACCGTATGCCGTAAACGGGCAGTAACACCCCCGATGAGACGCAGGTTCtgaatgtgctgtatacatgtccaaagaatgcctctaaaaccggaataataccagaatatcACACAAGTCTTCATCAGACAATGTTATTATATAGAGAATATCTAAATGAAATATGATGTGTACATCAGACTCTGGgtattagtggaatattaatGTGTAAACACACGGCCGATTTCTTCTCTAAACGCTTCACAGAGAAAGCCTCCTGGTGCCAAATACTGTTCAGTGTTTATTGATTGGGAATCAGGACAATCTGAGCAGAAGTTTTTACCCAGAGTGCCTTTCAGCAACGTTAGTGCATCAATACTTTTTAATTCAAACTACCGATTATGTTCACGGTggattaatgtgtggattatgttctggatgaatggatgagttgtttAGTCTCtcaaatgtggatcagtgtttcctaaaagcccaagatgacgtcttcACATGTCTGGTTttatccacaactcaaagatcttcagtttcctgtcccagaggagagaagatacTAGAAAGTATTCATATTTAAAAGGTAATTTCATGATTGTTTTCATCACCCtggactctctgtctccatgtgtgagtgtctgagtgtctgatggaacaacaatctgtgaacctggtccagtattaaaccagaacccagctgtaatgtaaccctacaggactaatgttcag

Function

GO: NA

KEGG:

id description
ko04964 Proximal tubule bicarbonate reclamation

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799603.1 True 2234 mRNA 0.48 10 42284636 42309616
XM_039799604.1 False 2222 mRNA 0.48 9 42284636 42309616

Neighbor

gene id symbol gene type direction distance location
LOC120559081 NA coding downstream 16693 42265526 ~ 42267943 (-)
LOC120558562 NA coding downstream 163165 42117744 ~ 42121471 (-)
LOC120558363 NA coding downstream 381868 41897815 ~ 41902768 (-)
LOC120558622 NA coding downstream 723001 41548861 ~ 41561635 (-)
LOC120558618 NA coding downstream 762347 41516985 ~ 41522289 (-)
LOC120559083 NA coding upstream 27877 42337493 ~ 42344971 (-)
LOC120558564 NA coding upstream 208168 42517784 ~ 42521088 (-)
edem2 edem2 coding upstream 417779 42727395 ~ 42740582 (-)
LOC120558553 NA coding upstream 463930 42773546 ~ 42950080 (-)
LOC120559086 NA coding upstream 655197 42964813 ~ 42987925 (-)
G57548 NA non-coding downstream 511 42225366 ~ 42284125 (-)
LOC120558571 NA non-coding downstream 49590 42197156 ~ 42235046 (-)
G57543 NA non-coding downstream 102317 42181726 ~ 42182319 (-)
G57546 NA non-coding downstream 104129 42180183 ~ 42180507 (-)
G57544 NA non-coding downstream 108893 42170692 ~ 42175743 (-)
LOC120558572 NA non-coding upstream 76583 42386199 ~ 42388387 (-)
G57608 NA non-coding upstream 278459 42588075 ~ 42588539 (-)
G57614 NA non-coding upstream 314135 42623751 ~ 42690384 (-)
G57602 NA non-coding upstream 363172 42672788 ~ 42679995 (-)
G57619 NA non-coding upstream 374534 42684150 ~ 42684861 (-)
LOC120559080 NA other downstream 96181 42173990 ~ 42188455 (-)
LOC120558559 NA other downstream 149978 42128243 ~ 42134658 (-)
LOC120558546 NA other downstream 365893 41904140 ~ 41918743 (-)
LOC120559079 NA other downstream 552835 41716870 ~ 41731801 (-)
G57146 NA other downstream 1153166 41130882 ~ 41131470 (-)
G57595 NA other upstream 226606 42536222 ~ 42651415 (-)
G57599 NA other upstream 318140 42627756 ~ 42650751 (-)
LOC120559085 LOC106531971 other upstream 322601 42632217 ~ 42660186 (-)
LOC120558550 LOC101476713,LOC102213613,LOC102303270,LOC100708795,LOC107104441,LOC107391492,LOC103384463 other upstream 370702 42680318 ~ 42698353 (-)
LOC120559088 NA other upstream 799820 43109436 ~ 43123426 (-)

Expression


Co-expression Network