LOC120558562


Basic Information

Item Value
gene id LOC120558562
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 42117744 ~ 42121471 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799611.1
CTTGCAGATCTAATACCATGTAGCGGCTGTCTTGCATAAACAGGAAAAGCATGGTTTCATGTTAGTATATCTAGAGGTAGCAAGCAAACCCTGAGCAGATTCAGACTTTGCAGCAAAGATGAAGAACTTCCTGCCAAAGTTCGCTCTCAAAAAACTCAGCACCTACGTCGCAGTGATTGTGATTTTTGTTCACAATGTTGTGCTCGACAAGGATTTGGAGTGCTCGTGCAAAGGACGAGCTCTTGACTGCAATTTCTACATGATTATGCCGTTCtttattatatttgttttacaACTCTGGACGGACAGAACATTTCTGAGAGCCTGGAAGTATACCTGTGCCTGTACCTGTATGTGTACAAATGAATGCAAGAAAGCCTTTAAAAAACGTTGCAAACTGTTCTGCATTTTAGTTTATCACATTGTCAAGGCTGTGTTTGTTGGTCTGCTGTGGGTTACCTCTGTGTACATCGATGGAGACTGGTATGTTTGCTGTTGGAATGATCATTCTGAACAACAGAAACAGTTAGcctgcaaagacaaaaaaactcaCAGCTGAGGAAAAGGCGATCATCGCTGAACTGAAAAACCATTCAATGGTTATCGGCATGTCTCTGCTCTTTTGTATCCTGTCCCTGGCTGCCTTGATATCATTATTTGGACGGATGACATGCTGTAAGGATTCAAGTTGTTGCAACAGAAATATTTTGTACTACGAAGTGATTTTGGATGAGGAGGaaaatgtgctgaaagagaTTTTGACAAAAGCAGCAAAAGAACAGTTGACTGACGCAGTCAAGTTGAAAATGGGTAAACCCGAGTGGCAGAAATGTTATGATGTTGCTATAGAACTGATTGAACAACCCACTGCAGCCGAAAACCAGGAGCACATTCCTCTTGAACAACGGAGGCCAGAGGATCCGAGGCCAGAGGATCCGATGCTAGAGGAACCAGAGGATCGGCAGCCAGAGGATCAGAGGCCAGAGGAACCAGAGGATCGTAGGCCAGAGGATCGTAGGCCAGAGGATCAGAGGCCAGAGGCGGCTCGTCTTTTGGCggaggagcaggagagaagggaggagaATCCAGATTCATCCGACGCTCGCCTATAAAGATGGATCTtttatgatcttttttttttatgcaacaCAACATACTGGAAAGAAATGTTGTATTGACCTTAAACACTGGATGGTTCAGATCTTCCTGCAGCTAAATGTAGataaggagagagggagagagggagaggaagaaagagaggccGTGGGCCGTTAAAGTCTGTCCATTTTTTGGCAGCTGTAAAATTCCAGCAACATCAGCAAACGTCTTCCCCTGCTGTTGctttttggttttcttttcttttacaatTTGTGTACAGGGATTTCTCTGAACCAAGTCATAATACATTACATAGATGAGACGTAAATCAGATGTTTGATCTGATTAAACCAACAGGCCGGTACCTGTGCACACAGTGTGTACTGCAGAGCTGGAGGAGCTGGCACCTGCAAAATAGAAAGTATTCACCACACAATGTTGGCATTAAACGACCACAAGCACGTGTGGTTTCTCTTTCTCAGGCCGACTCTTTCCTTCTTGTGCTGCGTGTCTGATCAGTAACCTGTTTGCATCCTGTCACTGCAGCGCTGCTCACCTTCATGTCTCTACCTtttaaaattcaataaaacaaaacagaacattGAAACTGTTCTGAAATGAT

Function

GO: NA

KEGG:

id description
ko04640 Hematopoietic cell lineage
ko04658 Th1 and Th2 cell differentiation
ko04672 Intestinal immune network for IgA production
ko05310 Asthma
ko05332 Graft-versus-host disease

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799611.1 True 1720 mRNA 0.44 4 42117744 42121471

Neighbor

gene id symbol gene type direction distance location
LOC120558363 NA coding downstream 214976 41897815 ~ 41902768 (-)
LOC120558615 NA coding downstream 410398 41296080 ~ 41707346 (-)
LOC120558622 NA coding downstream 556109 41548861 ~ 41561635 (-)
LOC120558618 NA coding downstream 595455 41516985 ~ 41522289 (-)
LOC120559078 NA coding downstream 621239 41488131 ~ 41496505 (-)
LOC120559081 NA coding upstream 144055 42265526 ~ 42267943 (-)
LOC120558557 NA coding upstream 163165 42284636 ~ 42309616 (-)
LOC120559083 NA coding upstream 216022 42337493 ~ 42344971 (-)
LOC120558564 NA coding upstream 396313 42517784 ~ 42521088 (-)
edem2 edem2 coding upstream 605924 42727395 ~ 42740582 (-)
G57533 NA non-coding downstream 23967 42093445 ~ 42093777 (-)
G57271 NA non-coding downstream 344311 41621522 ~ 41773433 (-)
LOC120559836 NA non-coding downstream 359085 41757542 ~ 41758659 (-)
G57265 NA non-coding downstream 538828 41575016 ~ 41578916 (-)
G57199 NA non-coding downstream 576189 41541337 ~ 41541555 (-)
G57544 NA non-coding upstream 49221 42170692 ~ 42175743 (-)
G57546 NA non-coding upstream 58712 42180183 ~ 42180507 (-)
G57543 NA non-coding upstream 60255 42181726 ~ 42182319 (-)
LOC120558571 NA non-coding upstream 75685 42197156 ~ 42235046 (-)
G57548 NA non-coding upstream 103895 42225366 ~ 42284125 (-)
LOC120558546 NA other downstream 199001 41904140 ~ 41918743 (-)
LOC120559079 NA other downstream 385943 41716870 ~ 41731801 (-)
LOC120559188 arl8a,LOC100698319,LOC105027762,LOC103362481 other downstream 980018 41126335 ~ 41137726 (-)
G57146 NA other downstream 986274 41130882 ~ 41131470 (-)
G57134 NA other downstream 1007077 41012073 ~ 41110667 (-)
LOC120558559 NA other upstream 6772 42128243 ~ 42134658 (-)
LOC120559080 NA other upstream 52519 42173990 ~ 42188455 (-)
G57595 NA other upstream 414751 42536222 ~ 42651415 (-)
G57599 NA other upstream 506285 42627756 ~ 42650751 (-)
LOC120559085 LOC106531971 other upstream 510746 42632217 ~ 42660186 (-)

Expression


Co-expression Network