LOC120558564


Basic Information

Item Value
gene id LOC120558564
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 42517784 ~ 42521088 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799613.1
tgggagatttatactaGATGGTAGCACGGAGCTAGCGGCAGAAATGACCGAAAATGTgataaattatggacatcaagtggataaatcttggatGATCAGATGTAACTTTTGTCTTCATCAACACCACCTACATAACATGGACTCAAGCCCAGAGCTACTGCAGAACTCACTACACAGACCTGGCCAGTGTGAGGAACATGACAGAGAACCAGAAGGTACTGGCGATGACAGCTGCTGGAGGATCCTATGTCTGGATCGGCCTTTTCAGAGATTCCTGGAAGTGGTCAGATGGAAGTACCTCCTCATTCAGCTTCTGGAAGACCGGCCAACCTGATAACAACAACGAGACTTGTGTCGCTGCAGActtcagccaatcaggagcCTGGGAGGACTGGTCCTGTGACATGGAGAGAGCGTTCATTTGCTACGGTCCAGCGGTTCCTGTTTCAAAGAAAGTGCTGAAAGTGAAGTTTGAGAACAAGAAGAATCTGGATCTGAATGACCCTGCTGTGATGGAGGCCATGTTGAAGCAGCTGAAACAGAAGCTGAGGGCCCAGGGGCTGGACGACAACATCAAACTGAGCTGGAGGAAGCAGGCTGATGGAAAAGTCTTCCACAAGGAAGACAAGAAGACcaacaagaggaggaggaagagggaggagctGTAATGTTGAGTTGCTGCGTCTGGTTTCATCAGAGAAAAGTCTGGTTCTTTGCAAGCAGAAATACTAAatatattcacagcttctagcttctcaaatcatgaatatttattttttgtcatatttgatcATAAACTTAATATATTTGAGCTTCAGACTGTTGTTAGAATAAATCAAGACTTTAGTATTTATCCGATTTATCAGCTTTGGGGAAATATAACCgacatgttttactgatttactgtttcttctttaaaatctattttaatgagataaaatgtctttcttTGTTTGAGAGTAAAGGGTTTTTCACACGGGGAGCGACCCTTGGCCTGCGTAGTCGTGTCATGTGATGGACAACGCTCCGCGATCAATGTGTGGTAACCATGGAGATACTGTATCCCTGCTGTACAACTGGATGAGATCATCTGACTGTGGTTTCATATCTCCCTAATCACAGGTGGATTTATAACACATAGTGGTAATCCTAGTCTTTCCTAACCACAGACAGTTATTGTtgatagctaaagttagctacaTTAGCATAGTTAGCTACATTAGCATAGTTAGCTACATTAGCATAGTCATGATTACGGACGTCTTGTGCCGATGTTCTGATAACTGTTTAGAAAACACTTTTATATTTTAGTAAACTCACAAACAGAAGAGGAAGTTGCACCACATGAAGGCCCCGACCTTggcgtgtgtgtgagtaagaTAACAGTTTCTGCCTAAGAAACAagaagacccccccccccctgtgagGATAGGATAAGTATAAGATAAGATAGGACTCAGTAATCAGACTGATCCTTGTGTTCTGGTAAACTTAAGTCCAATGAAAGAAGGCGTGAGAATTAttaaattggagtcagattgaCAGGCCTTAGGGTCTCATTTGGACAAATTCCttacagtgtgtgcatgtgatgaGCACGAACGCCACAGTTGTCGCGTCGCCTGTcaaactgcccccccccccaccacctgCCTGACCGCTCTCCTCTCATTGAAACCATCGCCCCCCGTGTGGAAAGGCCTTAACAAGGCGTCTGGCTGTGATGAGTCAGAATATCTTTAAATGAGTGATATAGAAGATAATCATGTGAATATATTAGTGTTGTGCTGTCACCTTATAAACAAACTCAATCtgaagatgtttttacagttttcagccgtgatccagaatgaaaatctgcagaattgAACCGATTGTTtatcaggttggaggtggagatgttttattttaatttgtttaaaatctggGTAATATTCTGTCTGCAGATTCTGTGTGGCTCTGGTTATTAGAGatgcaaactttaaacatttcCCTAAAACTTGATGTGACTGTAACATCTTCCAGACAGAAACACTAAATATATTCACAGCTTCTCAAACAGGaagatttgatgcttttctttgttataTTTGATCATAAACTTAATATATTTGGGCTTTATACTGTTGTTAgaagaaaaacaatattttagtaTTTATCTGATTTATTGTCTGTGGGGAAATATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799613.1 True 2186 mRNA 0.41 4 42517784 42521088

Neighbor

gene id symbol gene type direction distance location
LOC120559083 NA coding downstream 172813 42337493 ~ 42344971 (-)
LOC120558557 NA coding downstream 208168 42284636 ~ 42309616 (-)
LOC120559081 NA coding downstream 249841 42265526 ~ 42267943 (-)
LOC120558562 NA coding downstream 396313 42117744 ~ 42121471 (-)
LOC120558363 NA coding downstream 615016 41897815 ~ 41902768 (-)
edem2 edem2 coding upstream 206307 42727395 ~ 42740582 (-)
LOC120558553 NA coding upstream 252458 42773546 ~ 42950080 (-)
LOC120559086 NA coding upstream 443725 42964813 ~ 42987925 (-)
LOC120559087 NA coding upstream 497789 43018877 ~ 43038229 (-)
LOC120558554 NA coding upstream 532912 43054000 ~ 43098646 (-)
LOC120558572 NA non-coding downstream 129397 42386199 ~ 42388387 (-)
G57548 NA non-coding downstream 233659 42225366 ~ 42284125 (-)
LOC120558571 NA non-coding downstream 282738 42197156 ~ 42235046 (-)
G57543 NA non-coding downstream 335465 42181726 ~ 42182319 (-)
G57546 NA non-coding downstream 337277 42180183 ~ 42180507 (-)
G57608 NA non-coding upstream 66987 42588075 ~ 42588539 (-)
G57614 NA non-coding upstream 102663 42623751 ~ 42690384 (-)
G57602 NA non-coding upstream 151700 42672788 ~ 42679995 (-)
G57619 NA non-coding upstream 163062 42684150 ~ 42684861 (-)
G57618 NA non-coding upstream 177649 42698737 ~ 42701952 (-)
LOC120559080 NA other downstream 329329 42173990 ~ 42188455 (-)
LOC120558559 NA other downstream 383126 42128243 ~ 42134658 (-)
LOC120558546 NA other downstream 599041 41904140 ~ 41918743 (-)
LOC120559079 NA other downstream 785983 41716870 ~ 41731801 (-)
G57146 NA other downstream 1386314 41130882 ~ 41131470 (-)
G57595 NA other upstream 15134 42536222 ~ 42651415 (-)
G57599 NA other upstream 106668 42627756 ~ 42650751 (-)
LOC120559085 LOC106531971 other upstream 111129 42632217 ~ 42660186 (-)
LOC120558550 LOC101476713,LOC102213613,LOC102303270,LOC100708795,LOC107104441,LOC107391492,LOC103384463 other upstream 159230 42680318 ~ 42698353 (-)
LOC120559088 NA other upstream 588348 43109436 ~ 43123426 (-)

Expression


Co-expression Network