casz1 (casz1)


Basic Information

Item Value
gene id casz1
gene name casz1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 24204375 ~ 24253787 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799625.1
gagagagagagagagagagagagagagagcagagccTTGGCAGAGAGCAGTTTAGGAGAAAATGCCTTGCTTTGTGGAGAGAATTCTTCCAGGGCAGGAGGGAGAGGTGAGACAGAGCGCAGAGGGCGGTCTGCTGCcagCTGAAAGGAGTTTATGCACTGAAACGACCTCAGGAAAACCCAAGATGGCCGCCAAAAGGAAAGGTGGCTTAAAACTCAATGCTATCTGTGCCAAGCTGAGCCGCCAGGTGGTGTTCGACAGtagctcccagaatgcagagggAGACCAGAGTGTAGCAGAAAACAGTGAGCGTGGCAGTTCTAACTACGATGACACTGAGACCAACTTCCCAGAGAGCCTTAACCTCAGTCAGAGCCTAGAGGAGGACCAGAAGAGACGCGAGGCCATTGAGAAGTGGGTCAACGGCGAGTACGGCGATGAACCGCCAGCTCCCGATGATGAACAGGAGCATGAACTCAAAGTCAGCAATGGCGAAGATGACCCTCCTGAGGGCGTGTACATGGTACAGCCCACAGGCTGCAGCGATGACGAAGACAACGCAGAGGAGGGCGAGCCAGTGGCAGGCTCTCAGGAGGACAGTTACCATGACGACAAAGAAGCTGAAGTCAGGCCTTCAAAAGACAACACCTACTTCCCACCAAGCGAGGCCCAAAGTCGCCAAGCACCTTTCTCCTCTACAGGAGAAGCATCTGCCCTGCGAGACTATGCAGCCAACACCATGAATGAATTTTTGGGAATGTTCGGTTATGATGACCAGCAGGTAAGGGATGAGCTGACCAAGAAGATCAGCTTTGAGAAGCTCAAAGCTGCTACCTCAGACCCCTCATCCCTCAGCAGTGAGGAGGCCTCACGCCGTGCTCGCTTCTCCAAGTACGAAGAGTACATTCGCAAGCTAAAAGCTGGGGAGACCCTACCTTGGCCCATGCATGCTTCCCCACCCAAACCAGACGACCTCAACCCAAAACTGGCCCAAGACAAGAGCGCTACCATACTCAGacaggtgagaaaaaaaaaaaaaaaccaaaaaaaaaaggaaggtttAAAAAAGAGAAAGCGACCCTCCAAGTACGACCTGGAGAACGTCAAGTTTCTGCACCTTTTCAAGCCTGGTGAGGGCAACCCTGACATGGGCGGTGCCATCGCCTTTAAGACTTGCAAAGTGGGCCGCCCTTCGAAGTATGACATCAGAACAATTCAGAAGCTAATGCCAGGAAATCCTGAGGCCTCATTGATGCCCAATATCCTCGCTACAGCACCAGGAAACCCAGGAGCTCCTGGTGTCCCCACCGTGAGCACAGCTGGGGCCAGCATCGCCCCAGGGCTGACAATAGACCAGACAGGACACTTAAGCTTCAATGCCGCCGACTACCTGAAGTCCAGCTTTTCCAAGACTGACTCCATCACCACGGGCACTGTGTCCTCCGTTAAGAATGGCCTGCCACCAGATAAACCCGCCAGCGACGACATCAACCTCTACCAGAAATATATTGCCAGATTCTCTGGAAGTCAACACTGTGGACACGTGCATTGTGCCTACCAGTACAGAGAGCATTACCACTGCATGGACCCTGAGTGTAACTACCAGAGGTTTACCAGTAAGCAGGATGTAATCAGGCACTACAACATGCACAAGAAGAGGGACAACTCGCTGCAGCATGGCTTCATGCGCTTCAGCCCTCTGGACGACTGCAGTGTCTACTACCATGGCTGCCACCTCAATGGAAAAAGCACCCATTACCACTGCATGCAGGTGGGCTGCAGCAAGGTGTACACTAGCACCTCAGACGTCATGACCCATGAAAACTTCCATAAAAAGAATGCCCAGCTGATCAACGATGGCTTCCAGAGATTTCGTGCCACTGAGGACTGTGGCACAGTCGGGTGTCAATTCTATGGGCAGAAGACTACACACTTTCACTGCAGGCGCCCAGGATGCACATTCACCTTCAAGAACAAGTGTGACATTGAGAAGCACAAGAGCTACCACATCAAGGATGATGCATATGCCAAAGATGGCTTTAAGAAGTTCTATAAGTATGAGGAGTGCAAGTACGAGGGCTGTGTGTACAGCAAAGCTACAAACCACTTCCACTGCATCCGCTCAGGGTGCGGCTTCACCTTTACCTCCACTAGCCAGATGACCTCCCACAAGCGCAAACACGAGCGCCGGCACATCCGCTCCTCTGGGGTCATGGGCCTCTCTTCCGCCTACCTGGCGCCAAAGGATGAGCCAGAGGAATCGAGCAATGACGACCTGATGGACTTCTCGACCATCAGCAGCAAGAACTCCAGCCTGAGTGCCTCACCTACAACCCAGCAGTCCACCACTGTATCGCACCTGTTGGCTACGCCTACCACtgctgtctcctcctcctctacatCGGTCCACACCCTCAAAGCCACATCCTCGCTGCCCAGCGCAGGCCAGCGAATGTCCAGCCTGCTGTCCCAGGCCCTGCCTAGCAACATGCCCGTGGCCCTTGCTCTTTCTAACAATGCCCTGGCCGGCTCCAACCCGTTCTTCCCCCTAATACCCAGGATGCCTCTTCAACCACCTCCGCCAGCCGCTAGCCTGATATCTGCTATATCTTCCGGGACCCACTCCATGCCCACCGACTCACTGACCCAAGGTTGCTCCACATTGGGTGCAGATGGAGCCATGGCCTCTACCCCAACGTCCTTCGCCACCTCCTCCATCATGGAGAAGATCTCGGCAAGCAAAGGTCTGATATCACCCATGATGGCCAGACTGGCAGCTGCTGCCCTGAAGCCCTCCAACAACCAAAACACAGGGAATGGGCAGCCGGCTTCAGCCAGCCAGTTCAATCTGGTTCAAGTGAAGCAGGAGCCAATGGACAACTCTGGGGCCTCCCAAGAATCCACGCAGGAGCACAGCCTGGACCTGAGCAAGAAAGACCACAGTAATGAATCAAACGGACACCCTGTACCAGGGAATACATCTCTTTTATCCTCGCTTATGAATAAGATGTCACAGGTGAACCCTGCCCTGTTCAGCGCCATGAACCTGAAGACAGAGCTGGAGGCAAGCCAGGGCAGCAACAGCTCGGAGGCAGCACAGTATCTGAACAGAGTGCTGAAGAGGCCCCTGCCAGAAAAACCCACTGAGATCTGGAGGACATACCTCCGCAGGTTTGACACAGATGACTTCTGTGAGGCTCAGTGCGACTTCCTTCAGAAAGTGCACTTTCACTGCCTGGTAGAGGACTGTGGTGCACTCTTCAGCACTGTGGATGGGGCCATAAAACATGCTAACTTCCACCTCCGTGCCACCTTGAAAGTGAAGTCTGAGCCTCAGTTTGGTGAGGGCAAGGACTCCAGTGAGGGAGCCTCGCTGCAGCCTGCTGCCCCCGTCTCTATGGCCAACAATCCCTCCATGGATGTGGCCCACCTCACCTCCTCTGGTGGCTAcagctctcctcctccctccctgctGGCCTGGAAGCAGCTGACCGGCAGCATCCCTCAGATGTCGGCCTCGATGCCCAACCTGCCGGCCAACTCCCCCCTGGCCACTACCTCTCTTGAGAATGCTAAACCTCAAGTCAAACCTGGTTTCCTGCAGTTTCAGGAAAATGATCCCTGTTTGGCTACTGACTGTAAGTACTCAAACAAGTTCCACTTCCACTGCTTGTTTGGAAATTGCAAGTATGTGTGCAAGACGTCTGGCAAGGCCGAGTCCCACTGTTTGGACCACATCAACCCCAGCAACAACCTGGTCAATGTGCGTGACCAGTTTTCCTACTACTCTCTCCAGTGTCTCTGTCCCAACCAGCACTGCGAGTTCAGAATGAGGGGCCACTATCACTGTCTGCGGCCTGGCTGCTACTTTGTCACTAACATCACCACCAAGCTGCCATGGCACGTCAAGAAGCACGAGAAGGCAGATCGCCGTGCCGCCAATGGCTTCAAATATTTCACCAAGAGGGAGGAGTGTGGGAGGCtggGTTGTAAGTATAACCAAGTCAACAGCCACTTCCACTGCATCCGCGACGGTTGCCAGTTCTCCTTCCTACTCAAGCACCAGATGACCTCACATGCTCGCAAACACATGAGGCGGATGCTGGGGAAGAATTTTGACAGAGTCCCGTCCcagGTGATGCCACTTGGACAGAGGGCAGATGCATCCAGCATGATAGGGACCCACCCTGGTATGAACTCCAGCTTCTCCTCCACCATGATGGAGGAGACTGATGATTACATGGACTACATGGGAGGAGGGGGCAGCCCCTTGGGCCTCTCCTCCGAGTCCTCCAACCAGGACCGGAGCTGCACCAGCACACCTGTAGGCAACGATGGTTCTCCAGCAGGACAAGGCTGGCTCGCCACCACTTCTGCTCCTACTACACCTGCTGACACTAGCGCTACCCAAAATGCACCTCCTtattcccctcctcctcctccaccgccaccaccaccaccacctcctccctccACTCTTCAGCCTGGCCTTCAGTCCCAGGCCCCatccctctctcctgctctcctccgaCCTCCTCTCTCCTCACTCCCAtacctcctctctccatcctgtCTGTCATACTCTCTGCTCAGCGCCTCTCTGGGAGCCACTCGGAGTGTTGTCATGCCAACCAACACACCAGCTTTCAGCCCCATCATTGCCACTCCGTCTCCGGTTAAAAATGACGTCCCTATAGTGCAGGATGCTGCAGGCAACACCATTTCCATTCCCACGGCCACTGGTGCAAAGAAGCGCTTCTGGATCATCGAGGACATGTCACCATTCGGCAAGCGCCGCAAGACTGCATCGTCACGGAAGATGCTGGATGAGGGGATGATGCTGGAGGGCTTCAGGCGCTATGACCTCTACGAGAACTGCAAGGACTCAGGCTGCCAGTTTTCTCTGAAGGTCACCCACTATCACTGCACACGTGAGAACTGTGGCTACAAGTTCTGCGGCCGCACCCACATGTACAAGCATGCGCAGCACCACGACCGCGTGGACAACCTGGTCCTGGACGACTTCAAGCGCTTCAAATCGTCACTCAGCTGCAACTTCCCTGACTGCCAGTTTTCGGGCAACAGCACCCACTTCCACTGTCTGCGCTGCGGCTTCCGCTGCACCGACAGCACCAAGGTGACGGCCCACCGCAAACACCACGGCAAGCAAGATGTGATCAGCGCCGCTGGCTTCTGCCAGTTCAGCTCCAGTGTTGATTGCGAGGTTCCCGACTGCAAATATAAGCTCAAGTGCTCGCACTTCCACTGCACCTTCCCTGAGTGTAAGCACACGGTGGTGGGCATGTCCCAGATGGACTCCCACAAGAGAAAGCACGAGAAGCAGGAGCGGGGTGAGCTGCCGTCTGTGTCGCCCAAACAGGAAGGGATGCACCACCTGGGAGGAAGTGTGTCTGCGGTCCCTTCCGGCTCTATGGGTCTTTCTACTTCCTCACCTAGTGGCCTCTACGGGTTGTCCCGCAGCATTGACAGCAGTGCTCCCTCCATGCTCTACCCGACAGACGGCATCGGGTCCGAGTATAACCACCTGTACCCACAGTCCTCCATCAGCCTGGACGGCTCCCTCAACCTGGGCACCGACACCAGCAGCTCCCTGTTCTTCCTGAAGAATGCAGCCGGTCTGGGGCTCAGCGACTCACTGGACCTCAGCAAGAAAATGCACCACAACGCAGCGCGATCTAGCCACAACCCATCAGCCCAGCTGGGTCTGCCAGCAGCTCAGGACGACACCACAGGAACATCTGGAGAGGCTGAAGATGACCTGTCGCCAGAGGAGGAGGTgcaggcagaggaggaggaggaagaagaagaggaggaggaggaagaagaagaggaggaggcggaCCTTAACAGTGACTCTAATGATGATTCAATGGCAGAGCCTGATGGTGAAAAGGACAATGGCGAGAGTTTTGATGCTTCCGTTAACCACACTGATTCTTCCCGACTGGAAAAGCAAGACGTTGAcccataaataataaaaaaaaaaaaataccagtgACTATAGGaactgaagaaatactctgtgtactatgaacaaacaaaaatgaaagtGGCCTCATTTATCATGTTTAGAGACTTCCCatgacaacaaaaaacaacaccagTGTGGAGAAAAATGACGGCCCGAAATGATTTATTGTGATGTTTACAAGATGACCAACATTATTAATTCAATTATGcattaaaaaatatgaacggaGACACAGAATTAGGCCCTGGTTTACACACGGGGCAGCAATGTAAAGCATTTTACTACACATCAGTCtttttgtgtgcgtgcatgtttgactttaatttattttcatttttttcaccttttttgtgtggataaaaaaagaaaaatgttagaaaaacaaatctctctatataactatatatgtaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgtgtgtgaacgATGATATACAAAAGGAAATTGCTGGCACAGGCAACATGAACTGCAGGGCCTTGGATACATAGAAAAAGGGACGTGAATCACTAAGGGGAAACAGGATGCATTCAAacatttgatcttttttttctgtattaatataattaattattattattattattatgaaacaCTGAGAGGAAAGGGAGTTACATTTTGCTTGTTCCCATCTCTCTCAATGCTTTTCTTTGTTCTCAATAACATGGAATTGACCAGTAAATATTTGGTCAGTCTCCCAGCAAGCTGCTGGTCTCAACAGTTCTCTGACATTATGCTGGAAATGTTCGACCAGCACCAAAACCAAGCTCAGCCCTTGTAATTTTACCCCCCTGCAGAGGAATCAAGTTTGTGTGTGGATAGTGCACTTTTATATTAGCTGACCACGATGATTACTGATGATAACTCATaagcatatttaaaaatatttttgttaccATTTGCATCTTTGCATTACAATGtcgttttgttgtgttgttagtCAGAAGCATATCGATCTGTAAGCAGGCGAGGTCGTGATTAACGGCCGGAGAttaaggctgtgtgtgtgtggggggggggggtcagacTGACCAGAGGAAGCGATGAGTCACTTAGATGCAGAGCAAGGGACGACGACAGAGGAAGCGTCAGGGAGTATGTTTTATGTTGAAAATTTGCAGACCGAAAATGTCTCAGCGGCATTTTGTTTCCATTCACTATGGCTGTGGTTGAGCTCCTGTTGTAAcggtttttatttaatatttatgtgACCTTCCAATGAGAAATTTCTAGGGTGTTATTGCACTTTTTAGGTTCATTTTTACcgtctgaaaaaaaaatgatatatatatcttttaacAGGGAATTTTGCTTTAAAGATGTTGTTTTAGTTCACTTTTGCTTTAATGCACAAATAGATGTTAGTGTGACAAAGAACTGTTCTGTGATTTATTTAAAGACTggtttttattttgcttctgtgattcgacagtttgaaaaaaaaaaaggaaatgggtGTGCCAGAAAAACGGTGCCCTGATGAGAAACACTAATACGGACTGTGATTTGAAATGAGTTCTTAAGAAGTTCATGGCAATGCTCACTTACTGCATACTAAATTATAAATCTGTCAAAGCCACCCTCGGGTTTATATTGAGCAAATATGTGCGACCGAGAAGTGGACACATTGATCATGAATTATCATTGGAAATAAGCAATCATAATATAAGGAATAAGTGTGTGTAGATGATATTCCTTCAGATGTtttgagaagaagaaaaaaagggttgtACAGTATTTTCCTCTGTAAAAAATAACTATATATGAACAAAATGCTCTTTGATGAACAGCatcctttaaaaagaaaaccgtTAAGagaaatgaataataaaaagttaaaaattCAAATAGCCTCATCATAGTTTGCTTGTGTGcgtgacatttttttattacccCAGATTTTTTTGGAAAAGAAATTGTTCATACTGTAGCATTGATTCCGTTATGTTtgcagtatatattttttttcttccaacgATGTCAGAAGCTCAAACTCAAATACACTTGTTTGAATTCATTCATCaatgtttctgttttatttagCGACTCGTTTTATTCATTGTCATTTTTcggtgtgatgttttttttttcctcattaatTGAAATTCTTGGTTTCTATTTACTTTGCTGTGGGCATGCCTCGTTCACAGACTCACCTGCCTCCGGGGACTCTGGTGCAAAGCAGAGGcgccatgtttgttttgttttctcatcAGATAACAGTAGGGGCTGAGACATTGTGCACTtgaattctgtgtgtgtgtgtgtgtgtgtgtgtgtgcgtgcgcgcgtgcgtgtgtgtgtgtaaaatagtAGGATTTGTAAAAagttgaaaataaagaaactatAATTATTAGAACAATACACATGCAGTGATTGGTAGTGCTTCAGCCTGAGGACTTTTTGGTCATGTGTAGAGGGAAAAGGTGCTGCTGGACGACAGCAGGGCAAAAGGTCACAGCTGcgatttctctgtctctttttctatcTGTCAGTGACActactgaagtgtgtgtgtgtgtgtgtgtgtgtgtctgtctccccctgagagacagacaggccatGGCTGTAAGAACACAGACCTGTGGCTCCGTCCCAGCTGCTCTGAGCTTCGATTCATATTTCATGACCTTGTGCGCCTTTTCCCTGCTTTGTTCCGCTTTAAATCCAACTGGGACACTTTTCTGTCACAGAatttgaagaaaacaaaaaacaaacatctgcaTTTATGCAGGTAAAGGAATCAACAATATTTGTTGTTGGGGTTGCCCGTTGTTCATGCTTGTCATTCTGGTGCGAGAACAAGATCAGAGCCAAGGACCATTAGGGAGAGTTAGAGGCCTGCTACCGCTAACAAGATGGCTCTCTGTGTCTTGTTCAGTGTTAACAgggcacttttttatttatttttttgctttgaGCCATGTGCTGGGTTCTCCTCCCACTCCCTCATGTCACCCAGTGGCCAGTGTGCTGGTTCTCTCTGTCCCTTCGTCTACAGCTGTTCCTGTCCTTCCTccttgtgatgtttttttttttttaataataaaaaaagaaaaaaattgggTAAAGGCATCACCATCTGTCAGCCACCTGGCATCCTGTATATAATCtaccagaaaaaaaagaataaacatgAAAATTATATTACACAAAAACCAGACGGAAACGACCTCCAAATTCTGCATAGGCTGCTGCCGAAACGACAGATCATTTTACTGTTTTAATTAACAGAGTAAAAAGGATGGTATAAAAAAGTGGTGGGGAAATAAACTGAAATGTATTACCACTGCTGGGAAAAACGTAATATGAAAGCCTCCTGCTTACTGCAGCGTAGTGGATTAACAGAGCAACATTTTAGACTTTGTAAAATATATTGCACTTTTGGACTAAAAGCCATCTCCCGTTTGCGTTCAATTTGGCTAGACTCATGAGACATTTTATATGAAAAGTATACAATGAAGCAATTTTTTAAAAGTCTCTACTTGAATTTGTTGCCCTCAGCACTACTATTCATTCTTGTCGTATTGCTTATTTCCACTTGGATACAGTGCTGTTTATCTTCATTGtgctatatttatgtttttcctCTGTTTCTGCATGTCTTATGCAAAGATTGAGCTTTTCACTcagtgaaataaaaacatactgAACGACTTTA

Function

symbol description
casz1 Predicted to enable metal ion binding activity. Predicted to be involved in regulation of neuron differentiation and regulation of transcription, DNA-templated. Predicted to be active in nucleus. Is expressed in several structures, including adaxial cell; cardiovascular system; hindbrain neural plate; musculature system; and nervous system. Orthologous to human CASZ1 (castor zinc finger 1).

NR:

description
zinc finger protein castor homolog 1 isoform X3

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K25209 CASZ1; zinc finger protein castor

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799625.1 True 9690 mRNA 0.48 20 24204375 24253787

Neighbor

gene id symbol gene type direction distance location
c5h1orf127 LOC104954118 coding upstream 183451 24013889 ~ 24020924 (+)
pgd pgd coding upstream 202939 23994946 ~ 24001436 (+)
kif1b kif1b coding upstream 210683 23928466 ~ 23993692 (+)
ube4b ube4b coding upstream 276909 23906900 ~ 23927466 (+)
rbp7a rbp7 coding upstream 298557 23903965 ~ 23905818 (+)
dffa dffa coding downstream 71474 24325261 ~ 24334067 (+)
LOC120559012 NA coding downstream 189101 24442888 ~ 24497151 (+)
cntn3a.1 NA coding downstream 305620 24559407 ~ 24630995 (+)
ttll9 ttll9 coding downstream 456996 24710783 ~ 24715633 (+)
ppp1r3da ppp1r3d,LOC104919428,LOC100701819 coding downstream 465988 24719775 ~ 24721848 (+)
LOC120558580 NA non-coding upstream 130367 24061063 ~ 24074008 (+)
G52629 NA non-coding upstream 191074 24012963 ~ 24013301 (+)
G52628 tardbp,LOC106566965 non-coding upstream 193274 24009796 ~ 24011101 (+)
G52611 NA non-coding upstream 366413 23837692 ~ 23837962 (+)
G52604 NA non-coding upstream 413853 23789448 ~ 23790522 (+)
G52728 NA non-coding downstream 16334 24270121 ~ 24274036 (+)
G52742 NA non-coding downstream 107019 24360806 ~ 24362267 (+)
G52756 NA non-coding downstream 133366 24387153 ~ 24390127 (+)
G52817 NA non-coding downstream 451751 24705538 ~ 24705906 (+)
G52827 LOC107550338,LOC103365918,LOC107551495,LOC104947949 non-coding downstream 498108 24751895 ~ 24753180 (+)
ctnnbip1 ctnnbip1 other upstream 389969 23791447 ~ 23814406 (+)
tmem201 tmem201,LOC102777799 other upstream 439210 23746365 ~ 23765165 (+)
atxn7l2b kcnc4 other upstream 1135896 22991252 ~ 23068479 (+)
lamtor5 lamtor5,LOC102787529 other upstream 1357437 22842044 ~ 22846938 (+)
LOC120559933 NA other upstream 1641854 22562154 ~ 22562521 (+)
LOC120559118 LOC102791662 other downstream 687008 24940795 ~ 24945320 (+)
G52871 LOC104956590 other downstream 699655 24953442 ~ 24957330 (+)
tprg1l tprg1l,LOC102784883,LOC106513028 other downstream 1489802 25743589 ~ 25748321 (+)
G53096 ybx1 other downstream 1817798 26071585 ~ 26076664 (+)
G53232 LOC104966952,LOC103362776,LOC102800046,LOC102208894 other downstream 2098673 26352460 ~ 26353463 (+)

Expression


Co-expression Network