gnai3 (LOC103367862,LOC105931781)


Basic Information

Item Value
gene id gnai3
gene name LOC103367862,LOC105931781
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 23109930 ~ 23126912 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799733.1
ATGCGCGACTGCGCAGCAGCAATAGTCTTGAGGGAAAATCTGCTGATTTTTATTGagaatttttctttaaaaagacaacatcatacataaaaatacaaatatctaCTTAAAGTAATTAGATTTCTggttttctatattttttttttgtatgttctTCTGTGAGTCTAAACTTCGGACGATTTggataaaaatattttaaagcatctgTTCGGGGAGTATTTTCGCTTAACACCCCGTATTTGATCACCTGTAGCCTACAGGCAGCAGTGTGTGGACTGAATCAGTGTCAGCATCAGACTTCAGTTGGACAGACGAGACTCCGGTGCCAACGCcttttctgcctctctctcgGCTGGGAAACTTTACACCGACCCAAGGGCTCGTTTTGACGGCGTTTCCCTTCGACTCATGAGCTGCTGAAACTATAATCCGACACTAAAGAAGTAGTTTGAGAGTGAAAATGGGCTGCACGATCAGCGCCGAGGACAAAGCTGCGGTGGAGAGGAGTAAAATGATTGATAAAAACCTGCgggaagacagagagaaatccTCCAGAGAAGTGAAACTGCTTCTGCTCGGTGCTGGGGAATCTGGGAAAAGCACAATAGTAAAGCAGATGAAAATTATTCATGAAGATGGCTACTCAGAAGAGGAGTGCAAGCAGTACAAAGTGGTGGTGTACAGCAACACCATCCAGTCCATCATGGCCATCATCAGGGCGATGGGCCGGTTAAAGATAGATTTTGGGGAACCTGCACGGGCAGACGACGCCCGCCAGCTGTTTGTCCTGGCGAGCTCGGCGGAGGAAGGGGTAATGTCGGCAGAGCTGACCGGCGTGATTCAGAGACTGTGGAGGGATGGCGGAGTTCAGACCTGCTTTGATCGATCACGAGAGTATCAGCTCAACGACTCTGCTGCATACTACCTGAATGACCTGGACAGGATCTGTCAGCCAGACTACATCCCGTCTCAGCAGGATGTGCTACGCACTCGTGTAAAGACCACTGGCATCGTGGAAACTCACTTCACCTTCAAAGATCTCTACTTCAAGATGTTTGATGTTGGGGGTCAGCGCTCGGAGAGGAAGAAGTGGATCCATTGTTTTGAGGGAGTCACATCTATCATTTTCTGCGTAGCGCTCAGTGACTACGACCTCGTCTTGGCTGAGGATGAGGAGATGAACCGGATGCATGAGAGCATGAAGCTTTTCGACTCCATCTGCAACAACAAGTGGTTCACGCTCACCTCCATCATCCTCTTCCTCAACAAGAAGGACTTGTTTGAAGAGAAGATCAATAGGAGTCCACTCACTATCTGCTACCCCGATTACCCTGGTGGGCACTCATACGACGAGACTGCAGCCTATATCCAGTGCCAGTTTGAAGACTTAAACAAACGAAAGGACACCAAGGAGATCTACACCCACTTCACCTGTGCCACAGACACCAAGAATGTGCAGTTTGTGTTTGACGCTGTCACCGACATCATCATCAAGATCAACCTGACGGAGATCGGGCTCTACTAAAGCTTCAGGCCCTGTTGGTGTCTGGAGCAGAATCAGGACTTCTGGGCAGGTATGTCTTGTCTGCAGAGGGTGAATTGGAACGTAGGTGTTACTAAGGACTGAGCTGGTGGCCACACAGCATGTCGGACCTAAATTCCACAATTTGGGAACTTGATACTACAATTGCTTTTGTCTTAATATATGTTATGATGCAGAGCATACTGGGAGGAAGTGATAAGTGTGGGAGGCTTGTGAAATGATCACTGTGAGATCTGTGGAGTCCTGTCATATTTAAGACCTTTGCATCATTCGTGGGCTGGCAAGAAAAGCCCCTCTGATGTCTCTGACACATTTATACTTTGTCTGTAATATGTACAAGGACCAAAACAAATCCATCACTGCATTTCACAGATTCACATCTGATATGTAAATTCTGTTCACTTTTTTCTGTTGCATCTTCTCTTAGCCTCTCTTAGTCTGTATCACATCATTTTTATTGGAataattgcattttattttaatttttcagTTGCAATGGTATAGTATTTCCACTTCTGGATGTGTGAATGCAATAACTTATGTATGGAGAGAAGGGTTTTTTGTGAGCAGTTTTGATGTATATAACGTAAACTTTTGGGTCGGGGATTAGTTAGCAAGAGTGTACTCAGTAGCAACACGGCTGTCTAcatagttaaagtgatggttcggagtaattcaccctagggtcctttgcaccatgacctcgagccaaacctGGTTC

Function

NR:

description
PREDICTED: guanine nucleotide-binding protein G(k) subunit alpha-like

GO:

id name namespace
GO:0007188 adenylate cyclase-modulating G protein-coupled receptor signaling pathway biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0003924 GTPase activity molecular_function
GO:0005525 GTP binding molecular_function
GO:0004871 obsolete signal transducer activity molecular_function
GO:0031683 G-protein beta/gamma-subunit complex binding molecular_function

KEGG:

id description
K04630 GNAI; guanine nucleotide-binding protein G(i) subunit alpha

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799733.1 True 2264 mRNA 0.45 9 23109930 23126912

Neighbor

gene id symbol gene type direction distance location
gpr61 LOC104942230,LOC103367872,LOC101482146,LOC102303595,LOC100709777 coding upstream 5835 23099553 ~ 23104095 (+)
sypl2b LOC104926818,LOC104942234,LOC103367903 coding upstream 48595 23057049 ~ 23061335 (+)
ngrn NA coding upstream 76826 23031296 ~ 23033104 (+)
slc6a17 slc6a17,LOC104944562 coding upstream 167055 22919774 ~ 22942875 (+)
slc16a4 slc16a4,LOC102787232 coding upstream 232668 22847985 ~ 22877262 (+)
ampd2b LOC103367831,LOC100709506,LOC102200760 coding downstream 18774 23145686 ~ 23167490 (+)
LOC120559793 LOC104960090,LOC107090275,LOC107390786 coding downstream 43322 23170234 ~ 23176129 (+)
LOC120559240 LOC102793838 coding downstream 66474 23193386 ~ 23200479 (+)
dnase1l1l dnase1l3,dnase1l1,LOC100708970 coding downstream 74707 23201619 ~ 23204113 (+)
si:dkey-183p4.10 NA coding downstream 78475 23205387 ~ 23207331 (+)
G52364 nfya non-coding upstream 86602 23020806 ~ 23023328 (+)
G52379 ahcyl1,LOC104942237 non-coding upstream 89922 23009177 ~ 23020008 (+)
G52342 rbm15 non-coding upstream 221243 22884049 ~ 22888687 (+)
G52333 NA non-coding upstream 262634 22834798 ~ 22847296 (+)
G52294 NA non-coding upstream 347376 22750063 ~ 22762554 (+)
G52403 atp5f1 non-coding downstream 13998 23140910 ~ 23192988 (+)
G52461 NA non-coding downstream 95014 23221926 ~ 23246504 (+)
LOC120558323 NA non-coding downstream 138319 23265231 ~ 23275195 (+)
G52509 NA non-coding downstream 320441 23447353 ~ 23447557 (+)
G52569 NA non-coding downstream 559440 23686352 ~ 23687361 (+)
atxn7l2b kcnc4 other upstream 41451 22991252 ~ 23068479 (+)
lamtor5 lamtor5,LOC102787529 other upstream 262992 22842044 ~ 22846938 (+)
LOC120559933 NA other upstream 547409 22562154 ~ 22562521 (+)
G52210 LOC104964406,LOC106525460,LOC105931770 other upstream 549602 22556329 ~ 22560328 (+)
LOC120558641 LOC103363734,LOC104967523 other upstream 1015040 22090197 ~ 22094890 (+)
tmem201 tmem201,LOC102777799 other downstream 619453 23746365 ~ 23765165 (+)
ctnnbip1 ctnnbip1 other downstream 664535 23791447 ~ 23814406 (+)
LOC120559118 LOC102791662 other downstream 1813883 24940795 ~ 24945320 (+)
G52871 LOC104956590 other downstream 1826530 24953442 ~ 24957330 (+)
tprg1l tprg1l,LOC102784883,LOC106513028 other downstream 2616677 25743589 ~ 25748321 (+)

Expression


Co-expression Network