si:ch211-156j16.1


Basic Information

Item Value
gene id si:ch211-156j16.1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 25155352 ~ 25165194 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799812.1
CTCTACCCGCCCAGCCCACCACCAGTACCAGCACCCCTCCTCCACTCTGAGctcagtcactcacacacactctcttttctctctcctgctgtGTGCCagtccctctctccccctcgaCTTCCTCTAAGTGGCCACagctcctctcttttctcttatcCTCTTTACATCCCTCCACCACTCTCTTTCCTACTCCAGCTGTCGAGAGCAACCCGGCTCTGTCTGTTCGTCTTCACCTATACGAGTTAAACGGATCTCAGGCCGCTACTTTCACTAACTTTCCACTGAAGACTTTATTTTCATTCgtgacctttttatttttggtcCTTCACCCTTCCCCTCTGGAGAGGCCGGTTGGTGTGTGTCTGGCGTGTGTGCAGCAGCGTGTGCGAGGGCTCTGGTGTCGTGCTCTGCCCCGAGGGAGCCCATAAAGGTTGTGACTGGAGGAGAAAAGTTTTCACCACAATGAATGTTCAGCTGCTGCTTCTGTTGGCCCTGGTTGGCCCTTTCTGCGCCTTCACACATGCAAGCCCCACAGAGATCCCTTCACACCCTGATGATGAGATCACTGAGATTGTAGCAGACATCATCCCTGAGGCCACCGAGGCTCCAAAAGAGGACCTGACTGTTATCACTGGTCCTCCTGCAACTGAACCAGCGGCGGCCCCTGAAGAAGTCGCAACAGAAGTGCCTGAAGAAGTCGCTACAGAAGAAGTCGCTACAGAAGTTGTCACCGAGGCAGCGCTTCCTGCCTTTACTGTCAATACTGAAGAGGCTGTCGTCGAGACAGAAGCCCCTTCTGTTGCTGCTACCGTAGCAGCACCAGAACCCCTTATCACTGACGCTCCTGTAGTGGAGACCGAAGCTCCCGATGAGTCAACTGACGTAGAGGTCCAACCTGAGGTGACGGAAGCCGCCAAGACGGGTGAAGATGTGGTCCTTGAAGACACAGTGGACGGCCTGAGTTCTGGCCAGGTCGTCGGCATTGTGATTGGCGCTCTGTTGGCTGTGGTCATCCTCATCGCCGTGGTGATTGCTGTGGTGAGGAGGATGGGAAAATACTCGTCTGCCAAGAGCAAAAAACCTGCGAAAAAAGACAGCGTTATGGTTTCTCCCTTGAGGAAAAAGTCTGCCAAGCAGCAGGAGCGCTCAAAGTTCTGGAAATTCTGAACTACTGAACTGTGACGTCTTTTGCGATCATTAAAACAAGCGCGATACCAGAACTAAACAAATCTAACCAGGACTCTGGACTGTTGCCAAaaaagagggggagggaggctTGTGTGTTAATGTATGTTCTGTATGAGTGTGAGACAAGAGGGGTATAAGAGCAAACATCCTCAcctcccccccactccccccTACCTCCCTGACCCCCACAGGAGCCGCTGATATAAAAGGTTCTGTCCTCCCCTACTCCCTTGGAGCGAACAAAACACGCTGACAGCAGGATGTCACAAAGAATTTCAGgcctttttaaatgcattttgttattataaaagAGTGAAAGAAAGGTAGGGGATTatctgatatactgtatatggataaaaaaaatatctccttTAAAGAATGACTGATTTAGATTTGCATGGACGTTTGAGAGGacacaaaaaattacaaaatactgacaaaacaaaaggaaatcaaATACACATGGAAGGTGGGAGCAGGAAAGAAAGCAGGAGAGAATGTTACAAATTCCAcatgatgtacagtatatacacaatgCAAGGGGTCTGCAGTACATAGTATACAGCTCATGAGTTTCTCATATGTTGTAGTCAGGGgcatagcacaaaattctggaccCTGTACACCGGCAtcctctatgggcccctccccacatccacagctattcattctagtatCTCTGTGGGCCCCCTTCTCATATGAGGGCCCTGcatactcagtccccttttccccccagtccAACACCCCTGGTTGCAGTTGCATAGGCTAGTGTTTTATTATGGAATACACAGTACATACAGAAAGCCTTAGGCTATTGTTGTGGCTAACAGACCTTTAAAGCACCCCTGAGCACCagttaaaacattttctcatgtaGCTAGTATCCCTGGTCAGTGTAacacttatcagttcaattttctaagcacaaacggacatttggaaaaacagaaaaatggcttccaatatccaatttttcattttttgggagaataccattgcagtattgaataattggagctc
>XM_039799813.1
CGCCCAGCCCACCACCAGTACCAGCACCCCTCCTCCACTCTGAGctcagtcactcacacacactctcttttctctctcctgctgtGTGCCagtccctctctccccctcgaCTTCCTCTAAGTGGCCACagctcctctcttttctcttatcCTCTTTACATCCCTCCACCACTCTCTTTCCTACTCCAGCTGTCGAGAGCAACCCGGCTCTGTCTGTTCGTCTTCACCTATACGAGTTAAACGGATCTCAGGCCGCTACTTTCACTAACTTTCCACTGAAGACTTTATTTTCATTCgtgacctttttatttttggtcCTTCACCCTTCCCCTCTGGAGAGGCCGGTTGGTGTGTGTCTGGCGTGTGTGCAGCAGCGTGTGCGAGGGCTCTGGTGTCGTGCTCTGCCCCGAGGGAGCCCATAAAGGTTGTGACTGGAGGAGAAAAGTTTTCACCACAATGAATGTTCAGCTGCTGCTTCTGTTGGCCCTGGTTGGCCCTTTCTGCGCCTTCACACATGCAAGCCCCACAGAGATCCCTTCACACCCTGATGATGAGATCACTGAGATTGTAGCAGACATCATCCCTGAGGCCACCGAGGCTCCAAAAGAGGACCTGACTGTTATCACTGGTCCTCCTGCAACTGAACCAGCGGCGGCCCCTGAAGAAGTCGCAACAGAAGTGCCTGAAGAAGTCGCTACAGAAGAAGTCGCTACAGAAGTTGTCACCGAGGCAGCGCTTCCTGCCTTTACTGTCAATACTGAAGAGGCTGTCGTCGAGACAGAAGCCCCTTCTGTTGCTGCTACCGTAGCAGCACCAGAACCCCTTATCACTGACGCTCCTGTAGTGGAGACCGAAGCTCCCGATGAGTCAACTGACGTAGAGGTCCAACCTGAGGTGACGGAAGCCGCCAAGACGGGTGAAGATGTGGTCCTTGAAGACACAGTGGACGGCCTGAGTTCTGGCCAGGTCGTCGGCATTGTGATTGGCGCTCTGTTGGCTGTGGTCATCCTCATCGCCGTGGTGATTGCTGTGGTGAGGAGGATGGGAAAATACTCCCCTTGAGGAAAAAGTCTGCCAAGCAGCAGGAGCGCTCAAAGTTCTGGAAATTCTGAACTACTGAACTGTGACGTCTTTTGCGATCATTAAAACAAGCGCGATACCAGAACTAAACAAATCTAACCAGGACTCTGGACTGTTGCCAAaaaagagggggagggaggctTGTGTGTTAATGTATGTTCTGTATGAGTGTGAGACAAGAGGGGTATAAGAGCAAACATCCTCAcctcccccccactccccccTACCTCCCTGACCCCCACAGGAGCCGCTGATATAAAAGGTTCTGTCCTCCCCTACTCCCTTGGAGCGAACAAAACACGCTGACAGCAGGATGTCACAAAGAATTTCAGgcctttttaaatgcattttgttattataaaagAGTGAAAGAAAGGTAGGGGATTatctgatatactgtatatggataaaaaaaatatctccttTAAAGAATGACTGATTTAGATTTGCATGGACGTTTGAGAGGacacaaaaaattacaaaatactgacaaaacaaaaggaaatcaaATACACATGGAAGGTGGGAGCAGGAAAGAAAGCAGGAGAGAATGTTACAAATTCCAcatgatgtacagtatatacacaatgCAAGGGGTCTGCAGTACATAGTATACAGCTCATGAGTTTCTCATATGTTGTAGTCAGGGgcatagcacaaaattctggaccCTGTACACCGGCAtcctctatgggcccctccccacatccacagctattcattctagtatCTCTGTGGGCCCCCTTCTCATATGAGGGCCCTGcatactcagtccccttttccccccagtccAACACCCCTGGTTGCAGTTGCATAGGCTAGTGTTTTATTATGGAATACACAGTACATACAGAAAGCCTTAGGCTATTGTTGTGGCTAACAGACCTTTAAAGCACCCCTGAGCACCagttaaaacattttctcatgtaGCTAGTATCCCTGGTCAGTGTAacacttatcagttcaattttctaagcacaaacggacatttggaaaaacagaaaaatggcttccaatatccaatttttcattttttgggagaataccattgcagtattgaataattggagctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799812.1 True 2208 mRNA 0.48 5 25155352 25165194
XM_039799813.1 False 2152 mRNA 0.48 4 25155359 25165194

Neighbor

gene id symbol gene type direction distance location
LOC120558685 foxj3,LOC100698572,LOC102787620 coding upstream 851 25088905 ~ 25154501 (+)
zmynd12 zmynd12 coding upstream 90176 25058460 ~ 25065176 (+)
LOC120558682 LOC103353010 coding upstream 96954 25055137 ~ 25058398 (+)
znf362b LOC104920215,LOC103353008 coding upstream 120837 25022625 ~ 25034515 (+)
alas2 alas2,LOC108236847,LOC106524166 coding upstream 155797 24990894 ~ 24999555 (+)
prdm2a NA coding downstream 9384 25174578 ~ 25184231 (+)
LOC120558931 kazn,LOC106524179,LOC107088875,LOC100696443 coding downstream 23512 25188706 ~ 25405950 (+)
LOC120558932 NA coding downstream 244534 25409728 ~ 25414753 (+)
tmem51a NA coding downstream 257688 25422882 ~ 25425937 (+)
LOC120558819 NA coding downstream 275167 25440361 ~ 25443840 (+)
LOC120558677 NA non-coding upstream 139954 25009989 ~ 25015398 (+)
G52892 NA non-coding upstream 195249 24959816 ~ 24960103 (+)
G52827 LOC107550338,LOC103365918,LOC107551495,LOC104947949 non-coding upstream 402172 24751895 ~ 24753180 (+)
G52817 NA non-coding upstream 449446 24705538 ~ 24705906 (+)
G52756 NA non-coding upstream 765225 24387153 ~ 24390127 (+)
G53056 NA non-coding downstream 644519 25809713 ~ 25811047 (+)
LOC120559215 NA non-coding downstream 830039 25995233 ~ 25997094 (+)
G53109 NA non-coding downstream 931165 26096359 ~ 26099635 (+)
G53221 NA non-coding downstream 1160027 26325221 ~ 26325468 (+)
G53222 NA non-coding downstream 1160725 26325919 ~ 26329616 (+)
G52871 LOC104956590 other upstream 198022 24953442 ~ 24957330 (+)
LOC120559118 LOC102791662 other upstream 210032 24940795 ~ 24945320 (+)
ctnnbip1 ctnnbip1 other upstream 1340946 23791447 ~ 23814406 (+)
tmem201 tmem201,LOC102777799 other upstream 1390187 23746365 ~ 23765165 (+)
atxn7l2b kcnc4 other upstream 2086873 22991252 ~ 23068479 (+)
tprg1l tprg1l,LOC102784883,LOC106513028 other downstream 578395 25743589 ~ 25748321 (+)
G53096 ybx1 other downstream 906391 26071585 ~ 26076664 (+)
G53232 LOC104966952,LOC103362776,LOC102800046,LOC102208894 other downstream 1187266 26352460 ~ 26353463 (+)
LOC120559113 LOC108236696,LOC104966950,LOC103362773,LOC103384494 other downstream 1212998 26378192 ~ 26383047 (+)
atp5f1e NA other downstream 1277856 26443050 ~ 26444890 (+)

Expression


Co-expression Network