LOC120558739


Basic Information

Item Value
gene id LOC120558739
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 40251556 ~ 40254265 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039799943.1
TTTTAGCAGAATCAAATCTTCCGACGAACATGGAGAGCTTTCGAGCAGCCCTGAAGCAATTTGCTAGCCATGTCTCTAAAGCAGCCTGTATCTATGGCACAGCCATTGGGCTTTTCTCCTACCATGTCCTGCTTAACAAGGACATGGCTTGCACTTGCAAAGAACAACTGGGAGCCTGCTGGTTATACATGACTTCACCAGCATGTTTACTATTTGTCTTAATACTCTGGATTGACAAACCCTTTCAGAGATCCATCAAGTACAAGCTGTATAATTGTGACCGTAAATTTATAAGGGTATTATCGATTCGAATTCTCAAGGCAGCTATGGTCAGTACGTTGTGGTGTATAGCCGTTCTCATCGATGGAGACTGGTTTGTTTGCTGTTACAATGATCACACCGAACAACAAGCACAGTTGGCCTGCAAAGACAAGACTGCAAAGACAGCTGAGGATCAAGCACTCATCGCTGAGCTGAAGAACAAGTCAAGGGAAATCGGCTTGCCTCTTCTCTGTATCACCTTGGTGGCTTCCTGCATGTCAGCAGTACCGTTGGACCTCTGCACTGCCAACGCTGACAAGCTTAAGGATATTATTTTGGAAGAATGTGAAAACCTAGCGACGAAGAAGCTGAGAGAAAATGCAAATGTTAAGCTGACTGAAAAACTCAACGCCTGTTTTACTGGTAATGACTGGGtaaaatgttttgattttgACGAGATTACTAAAGAGATAATATCCGCCCCGAATAACACACCAGCAGATGCCTCTACTCCAGAACCAGCCGAACCTTCATCTCCAGGACAATCAACCGAATCCACACCTTCAATCCCTATGAAGCAAATTAATCAGGCCGATAGTTAAACTGTTTAAACGTGATTTTAATCACTTCAACAACAGTATTTTTTTCATTGCTATGAAACCTAAACCTGTActctatagagctcaacagtcccgcccacagccgactccggaagtaaaaatcccattaattttctccataaggatttagatTATCTACCATAATatctaa

Function

GO: NA

KEGG:

id description
ko04064 NF-kappa B signaling pathway
ko04662 B cell receptor signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039799943.1 True 1032 mRNA 0.43 2 40251556 40254265

Neighbor

gene id symbol gene type direction distance location
gripap1 gripap1 coding downstream 118703 40039985 ~ 40132853 (-)
LOC120558856 slc6a8,LOC100704248,LOC102310663 coding downstream 903369 39333262 ~ 39348187 (-)
LOC120558637 syp,LOC103367257,LOC102314167,LOC102203308 coding downstream 1683921 38538673 ~ 38567635 (-)
pcsk1nl NA coding downstream 1720493 38508492 ~ 38531063 (-)
LOC120559059 LOC103370165 coding downstream 1899003 38343487 ~ 38352553 (-)
LOC120559070 NA coding upstream 281807 40536072 ~ 40566494 (-)
LOC120559367 NA coding upstream 326406 40580671 ~ 40594368 (-)
LOC120559370 NA coding upstream 344540 40598805 ~ 40602090 (-)
LOC120559368 NA coding upstream 383426 40637691 ~ 40647772 (-)
LOC120559573 myh7b,LOC100707717 coding upstream 522769 40777034 ~ 40836209 (-)
G57011 NA non-coding downstream 23483 40131071 ~ 40228073 (-)
G57007 NA non-coding downstream 56658 40067342 ~ 40194898 (-)
G57005 NA non-coding downstream 63210 40141227 ~ 40188346 (-)
G57013 NA non-coding downstream 66148 40133988 ~ 40185408 (-)
G56809 NA non-coding downstream 224817 40026319 ~ 40026739 (-)
G57047 NA non-coding upstream 73715 40327980 ~ 40398216 (-)
G57046 NA non-coding upstream 78558 40332823 ~ 40398015 (-)
G57054 NA non-coding upstream 86215 40340480 ~ 40400472 (-)
G57045 NA non-coding upstream 115922 40370187 ~ 40370815 (-)
G57057 NA non-coding upstream 118429 40372694 ~ 40375773 (-)
plxna3 plxna3,LOC101485239,LOC102288896 other downstream 623079 39466226 ~ 39628477 (-)
G56721 NA other downstream 637319 39550498 ~ 39614237 (-)
G56718 NA other downstream 738276 39389524 ~ 39513280 (-)
G56599 NA other downstream 1008818 39237644 ~ 39242738 (-)
G56598 pim2,LOC105920369,LOC106942189,LOC106931484,LOC104956371 other downstream 1049130 39113695 ~ 39202426 (-)
LOC120559369 NA other upstream 406544 40660809 ~ 40669343 (-)
G57041 NA other upstream 579833 40834098 ~ 40903924 (-)
G57036 NA other upstream 623617 40877882 ~ 40884606 (-)
G57134 NA other upstream 757808 41012073 ~ 41110667 (-)
LOC120559188 arl8a,LOC100698319,LOC105027762,LOC103362481 other upstream 872070 41126335 ~ 41137726 (-)

Expression


Co-expression Network