si:dkey-20d21.12 (LOC101471973,LOC106098224,LOC107390607)


Basic Information

Item Value
gene id si:dkey-20d21.12
gene name LOC101471973,LOC106098224,LOC107390607
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 27184494 ~ 27187943 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800092.1
ctctccatgtctATAGCTTCCTCTACCTCTCTCGCAGGGCAGCGAGGGTGGGCTAAatcagaacacagacacacacaaacatactttGTAGGAGTGGGTGGCCTACAGTTGCTCAGTGACACACACCAGCAGGACCCTGAGGCAAAACCTGGAGGTTCCCTTTTGCTTTCATACATCAAGGATTTTACTGGCAACACTTACTCGTTTGTTGGGATTTCATCTGAGTTTCAGTTGGATTACTTTAGTCATTGTGTGGCTCCTGGATAACCTGTGTGGATATTAAATGTATCTCATTGCTGCTCCTGTGGGTGCCGTTTTGGTAATCGGGTGTCTGAGTGTGAGGAGACTGGGTGAACAAGAAGAGCGACAGATTGAcaagaacaaacaagcaaacacacataaaacccAACACAGCTGTTGTTCCTGGTGACAGACGAACCAACCCATCCTCATCTCTATTAATTACCAACATATTTGAGATTTAGATGAGATGAAAATAGATCCAAATAGAACAAACAATTCCATTTATGAATGTAAGGCAAGTAAATAACCACCTCGTATTAGGCAAGCAAGAAGAACTTAGAACTTAAAGTGCTTTTCACAGGTCTAACTTTGTATTATcaacacacaataaaaagcTGACCTCGATAAATCACAAAATCCCTCCTTTTACTTTGTATCTCGGTCTTGGAATGAAAAAGTAgcattaacataaaaaaaatatttttttgtgtagctGACATAATTACAAACTGGTCAAAAGCCAGTTATGTTGTTGAGAGCCCAACTCCCTCCTACACCATCTTAGTGgatctcttttaaaaaaaaaagttttttaaagaAGTTGCCTGCATGGCCTTTGGAAGATAGCACACCTTTAGGAAGATCATACAGCTTCCAGATATAGTCGCTGGAAAGGTGTTGACTAGTAGAGTGTCATCTGGCAGTCTAATCATTTATCACTCGCTCAAGAGGAGGCGAGATGTCGAGGCCTCCTTCCTCCCAGACCACCCCTCAGTTCTACAGGGTCAGCGACAGAGATCTCACCGAGATCGAGCTACATTCAGTGGACTCTATCAACGATCTCCACCGAACACACCCCGAACACAGCCacaaagGGACGAGGCCTCCTCGTCCTGCTTACTCCCCCTCCTCGAACGGGAATCTCTACACAAGTGACatgacagctgtcaatcaaagaGGCCGTCCAGTCAAATGGCAGAGTCGCCTACAGGATATGTTGACACCCAGTTCATCGCGTGCCTATGCCATGGGCTGTGCTATTATCACTTTGCTTCTGCTAACAGTGTTACTCATCTTCTACTTTTTGGTCCAGCAGGGCGGCGCAGTCCGGATGCTGACTGAGGCATTGAGGGAGAAAGAGGCTGCAGCCACAGAGCTGTCACTGCTAATCCAAGAACTGCAGGCACTGAGACACAACCTGACAGCCATGAGAGGAGGGACATAAtatggacacatacacacatacatacactggACATGAGATGCTTTAAAGTACAGTGAAACAGTTTTTCAGTGGATTTTTCCCTGAAGAGGAAATATTTGTTAGAATGTTCTCTAAGTGTTGTCTGTGTTTCAAGACGAAATCTAACTGATGAACTATGTAGTTAAGAGAAAGgaggtttctgaaaacatttttactCTCTCTAGCCCTGGTAAGTTAACTTTTGAATGAACTAAAATACTTTGTTTCCCCGTGATGACGCTGTTATTAAAGCAGATGAACTGGTTGGATTAAATGAATAGAGGCTGTATATCTCATAACATTGCATTAATACACATTTAATGTCTTATGATTCAGCATTATTGACACTTCAACACAGTAAAAATGTGGTGGACTCACAAAAAGTAAAACTGACTTTGATTTGAAAGCCAAATCATTAAATGAGACAACAAAGACAATACTGTTTTCCAAGCATGTTTCTGTTAACTTGTTTGGCTCTTTCTTGATTAAAACAATGTTACATTAAGCAAATGTTAATGACTTCAACCGCAAATTTTAGCATatgataataaatatataattatcaGTTATTTAACAGTACATAAACTGTGCGTAATAATGTCATAATTGTTACATATCTTTTTCTGTGTTTGCTGATTTTCATCAAAGAATCACCTTTTAAAAGGAGCAGATTTGAATGTTCTCAGGCAAAGCCATGAGTTGTTTCCTGCTGCAAACAGATACTGTGGACTGCAGTTAAAACAACTTCCTCATATGATGAACACAGCTTAGAAAATAAATAGCTGATCTCTGGAAAATTAGCACTTTGAGGTGATGTTATTAAAATCTGATTTTCATgca
>XR_005639205.1
ctctccatgtctATAGCTTCCTCTACCTCTCTCGCAGGGCAGCGAGGGTGGGCTAAatcagaacacagacacacacaaacatactttGTAGGAGTGGGTGGCCTACAGTTGCTCAGTGACACACACCAGCAGGACCCTGAGGCAAAACCTGGAGGTTCCCTTTTGCTTTCATACATCAAGGATTTTACTGGCAACACTTACTCGTTTGTTGGGATTTCATCTGAGTTTCAGTTGGATTACTTTAGTCATTGTGTGGCTCCTGGATAACCTGTGTGGATATTAAATGTATCTCATTGCTGCTCCTGTGGGTGCCGTTTTGGTAATCGGGTGTCTGAGTGTGAGGAGACTGGGTGAACAAGAAGAGCGACAGATTGAcaagaacaaacaagcaaacacacataaaacccAACACAGCTGTTGTTCCTGGTGACAGACGAACCAACCCATCCTCATCTCTATTAATTACCAACATATTTGAGATTTAGATGAGATGAAAATAGATCCAAATAGAACAAACAATTCCATTTATGAATGTAAGGCAAGTAAATAACCACCTCGTATTAGGCAAGCAAGAAGAACTTAGAACTTAAAGTGCTTTTCACAGGTCTAACTTTGTATTATcaacacacaataaaaagcTGACCTCGATAAATCACAAAATCCCTCCTTTTACTTTGTATCTCGGTCTTGGAATGAAAAAGTAgcattaacataaaaaaaatatttttttgtgtagctGACATAATTACAAACTGGTCAAAAGCCAGTTATGTTGTTGAGAGCCCAACTCCCTCCTACACCATCTTAGTGgatctcttttaaaaaaaaaagttttttaaagaAGTTGCCTGCATGGCCTTTGGAAGATAGCACACCTTTAGGAAGATCATACAGCTTCCAGATATAGTCGCTGGAAAGGTGTTGACTAGTAGAGTGTCATCTGGCAGTCTAATCATTTATCACTCGCTCAAGAGGAGGCGAGATGTCGAGGCCTCCTTCCTCCCAGACCACCCCTCAGTTCTACAGGGTCAGCGACAGAGATCTCACCGAGATCGAGCTACATTCAGTGGACTCTATCAACGATCTCCACCGAACACACCCCGAACACAGCCacaaagGGACGAGGCCTCCTCGTCCTGCTTACTCCCCCTCCTCGAACGGGAATCTCTACACAAGTGACatgacagctgtcaatcaaagaGGCCGTCCAGTCAAATGGCAGAGTCGCCTACAGGATATGTTGACACCCAGTTCATCGCGTGCCTATGCCATGGGCTGTGCTATTATCACTTTGCTTCTGCTAACAGTGTTACTCATCTTCTACTTTTTGGTCCAGCAGGGCGGCGCAGTCCGGATGCTGACTGAGGCATTGAGGGAGAAAGAGGCTGCAGCCACAGAGCTGTCACTGCTAATCCAAGAACTGCAGGCACTGAGACACAACCTGACAGCCATGAGAGGAGGGACATAAtatggacacatacacacatacatacactggACATGAGATGCTTTAAAGTACAGTGAAACAGTTTTTCAGTGGATTGTGTTGTCTGTGTTTCAAGACGAAATCTAACTGATGAACTATGTAGTTAAGAGAAAGgaggtttctgaaaacatttttactCTCTCTAGCCCTGGTAAGTTAACTTTTGAATGAACTAAAATACTTTGTTTCCCCGTGATGACGCTGTTATTAAAGCAGATGAACTGGTTGGATTAAATGAATAGAGGCTGTATATCTCATAACATTGCATTAATACACATTTAATGTCTTATGATTCAGCATTATTGACACTTCAACACAGTAAAAATGTGGTGGACTCACAAAAAGTAAAACTGACTTTGATTTGAAAGCCAAATCATTAAATGAGACAACAAAGACAATACTGTTTTCCAAGCATGTTTCTGTTAACTTGTTTGGCTCTTTCTTGATTAAAACAATGTTACATTAAGCAAATGTTAATGACTTCAACCGCAAATTTTAGCATatgataataaatatataattatcaGTTATTTAACAGTACATAAACTGTGCGTAATAATGTCATAATTGTTACATATCTTTTTCTGTGTTTGCTGATTTTCATCAAAGAATCACCTTTTAAAAGGAGCAGATTTGAATGTTCTCAGGCAAAGCCATGAGTTGTTTCCTGCTGCAAACAGATACTGTGGACTGCAGTTAAAACAACTTCCTCATATGATGAACACAGCTTAGAAAATAAATAGCTGATCTCTGGAAAATTAGCACTTTGAGGTGATGTTATTAAAATCTGATTTTCATgca

Function

NR:

description
hyaluronidase-3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800092.1 True 2326 mRNA 0.40 4 27184494 27187943
XR_005639205.1 False 2287 transcript 0.41 5 27184494 27187943

Neighbor

gene id symbol gene type direction distance location
sema3bl sema3g coding upstream 221601 26901475 ~ 26962893 (+)
LOC120559520 NA coding upstream 332786 26812221 ~ 26851708 (+)
actr8 actr8 coding upstream 392100 26785790 ~ 26792394 (+)
LOC120559767 NA coding upstream 401462 26775810 ~ 26783032 (+)
cacna1db cacna1d coding upstream 429203 26659171 ~ 26755291 (+)
trnam-cau_2 NA coding downstream 188280 27376223 ~ 27376294 (+)
trnam-cau_3 NA coding downstream 190953 27378896 ~ 27378967 (+)
si:dkey-72l14.3 LOC100706739,LOC101069958,LOC103385031,LOC104952267 coding downstream 518553 27706496 ~ 27724463 (+)
trnar-ccu_1 NA coding downstream 575422 27763365 ~ 27763437 (+)
trnar-ccu_2 NA coding downstream 604549 27792492 ~ 27792564 (+)
G53461 NA non-coding upstream 25080 27157470 ~ 27159414 (+)
G53445 NA non-coding upstream 190812 26989829 ~ 26993682 (+)
G53418 NA non-coding upstream 360873 26820661 ~ 26823621 (+)
G53285 NA non-coding upstream 552887 26627296 ~ 26631607 (+)
LOC120559830 NA non-coding upstream 761435 26414885 ~ 26423059 (+)
G53487 NA non-coding downstream 65660 27253603 ~ 27255190 (+)
G53569 impdh2,LOC102785462 non-coding downstream 371010 27558953 ~ 27630584 (+)
G53586 arih2,LOC102785176 non-coding downstream 450903 27638846 ~ 27643964 (+)
G53588 NA non-coding downstream 456813 27644756 ~ 27647329 (+)
G53596 NA non-coding downstream 473705 27661648 ~ 27662098 (+)
G53305 NA other upstream 383748 26800096 ~ 26800746 (+)
LOC120559571 vapb,LOC100711919,LOC102796136,LOC101481364 other upstream 647143 26483532 ~ 26537351 (+)
gnas gnas,LOC102796627,LOC104936173 other upstream 660606 26490442 ~ 26523888 (+)
atp5f1e NA other upstream 739604 26443050 ~ 26444890 (+)
LOC120559113 LOC108236696,LOC104966950,LOC103362773,LOC103384494 other upstream 801447 26378192 ~ 26383047 (+)
G53488 NA other downstream 67431 27255374 ~ 27255716 (+)
LOC120559859 LOC101468803,LOC100690459 other downstream 224309 27412252 ~ 27417459 (+)
LOC120559343 NA other downstream 397582 27585525 ~ 27595409 (+)
bsna bsn,LOC102782891,LOC106513106 other downstream 766456 27954399 ~ 28143801 (+)
casp9 LOC104954971 other downstream 1131694 28319637 ~ 28322779 (+)

Expression


Co-expression Network