fance


Basic Information

Item Value
gene id fance
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 22530906 ~ 22534605 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800101.1
AATGACACTCGCGAAGAAGAAATGTAAACTAAACTGGCGGGGTGGCCGGACAGTGGCAGGCAGTGTGTACATATAAAGAGGCTATCACGGTACTTCACCCGATAGTATGGACACGGGTAGGTTTCTGAGTCGGTTTGACGGGCAGTCGAAGCTGCTGGTCCGGTCGCTCTGTGGAACCTCTGGTGTCCACAGAGCTCTAGGCGTCTTCTACAGGCAGCAGCGAGCCAACCCTGAAATGTCTCTGTCTAATCTCATGGGAACCCTGTGTCAAGACGAAGTAACCTGTCCAGATACCAAAGCCCAAACACTAACTGTTAAACCCCTGGTGTGCCTGTTTCCAGCATTATTCAAACAAAACCTGCTGTCCTTCATCCATCGGGTCCAATCGGTTCTTCCCCGGACCACTGTCCTCCATCTTCTGAAATGCCTCAGCCAGGACCTTCATCCAAGCCCCTGGGTCACTGCTCTGGTTAGACAGCTGGAAAGAAACTTGGGGGCCCACAATGAAAAGCCTCTGTATACTCCACTGTGCAGCCAGAGACTCAAGGAGCTTTCACAGCGTTTGGTTGGTTCTGGTGAAACTGAAGGATGGGCCAAGTGCTTCAGCGGTAAACCAGTAGAATCTGAATCTCGGAGTGCATCTTGTTTATCAGAGCTGGGTAcacaaaggaaaagaaagggCAGCGTTGTCACTTTGGACTCTGATGGTGAGGAAACAGGACAGCAGAGTAAACGGATAAAGATGGATCTCTGTGGAAGTGAATGTCTCGATACTGAAGAACAGAGCGCAAAAGCAGAGGCATCGGGAAGATTAGGAAGTGATGCTCCAGCAGAAACTCTTGCTGAAGAACTGCAGCCAGCACCAGACAGTTTATGTGATGCCCTGCCTGAACATATAAAGGTCTCTGTTCTTCAAATAAAAGAATTACTGGAAAGTCAGACAGAGTGGGACCAGAGCTCCATGGAGGTGTTCAAAGTGCTGAACGACTGTGACCCCGGCCAAGTGGAGGTTTTATGCAGCATGCTGAATTTCCCTGACTTACTGGAGCAGACTCTGCCTAAACTGTGCAGCAGTATTTTGGGTCCCTCTCCTGACTTCAGCTACAGCACGGCAGCAACACTCATCAAGAGCCTCCTGCTGCAGAAGGTCCTGTTCCTGTCAGAACCGGCCTCCAGATGTCTAGTCACtgcagtgatgtcactgtgtAGCCGCTATCCCAGACCAATGTGCCACGTTCTGATTGGACCAGTTCTAGAGGAAAAGAACATAGGGAATCCACAGGCTGAGCTGCTGAACAGACTGATAGAAGGCTGCCTGGATTCCCATTACAGACTGCTGGTGCTTCAAATGACATTCAAAATAGCGTGGAGTGAGGCTGTGCTCTCCATTATCCACAGCTTGCTAGACTCCAAGccTGACTTGAGTGAAGAACTGTTCACACAGTTTATCGAACAGCTCGTCAGCAAGGGTCCTCAATTCACGAAGTCTGTGAAGTTTGCAAAGATGATGCTAACAGTCCTCACCAAATATAGCAGTCATGTGACAgctgcacacaaacactcccTGCATGGTTGCCTGATATTAAATGAGACCTTCCTGAAAAAGTCTCTCCAAGCTGCTTTGAaaagaatcacacacacatgaagtTTCATCTGAcctaatgcatgttaataaaactgTTTAAATATG

Function

NR:

description
Fanconi anemia group E protein isoform X1

GO: NA

KEGG:

id description
K10892 FANCE; fanconi anemia group E protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800101.1 True 1690 mRNA 0.49 10 22530906 22534605

Neighbor

gene id symbol gene type direction distance location
mkrn4 NA coding upstream 200 22525297 ~ 22530706 (+)
ppardb ppard coding upstream 5966 22517239 ~ 22524940 (+)
LOC120559492 def6 coding upstream 15360 22501456 ~ 22515546 (+)
LOC120558509 NA coding upstream 133902 22388549 ~ 22397004 (+)
mipa LOC103368323,LOC101065051,LOC100704616 coding upstream 282176 22246955 ~ 22248730 (+)
rpl10a rpl10a,LOC103141192 coding downstream 892 22535497 ~ 22538153 (+)
LOC120558833 NA coding downstream 3675 22538280 ~ 22545840 (+)
smc5 smc5 coding downstream 31339 22565944 ~ 22581585 (+)
elapor1 kiaa1324 coding downstream 50826 22585431 ~ 22596202 (+)
mapk14a LOC103368176,LOC104964410,LOC104939458 coding downstream 62619 22597224 ~ 22610796 (+)
G52185 NA non-coding upstream 46805 22480543 ~ 22484101 (+)
G52179 NA non-coding upstream 54592 22474230 ~ 22476314 (+)
G52054 NA non-coding upstream 184260 22340383 ~ 22346646 (+)
G52064 NA non-coding upstream 275933 22254295 ~ 22254973 (+)
G52060 LOC104967533,LOC103368342 non-coding upstream 293724 22235156 ~ 22237182 (+)
G52272 lhfpl5,LOC102777996 non-coding downstream 95989 22630594 ~ 22631144 (+)
G52287 NA non-coding downstream 191268 22725873 ~ 22726131 (+)
G52288 NA non-coding downstream 191992 22726597 ~ 22729555 (+)
G52294 NA non-coding downstream 215458 22750063 ~ 22762554 (+)
G52333 NA non-coding downstream 300193 22834798 ~ 22847296 (+)
LOC120558641 LOC103363734,LOC104967523 other upstream 436016 22090197 ~ 22094890 (+)
avpr2aa avpr2,LOC105897269 other upstream 470261 22046763 ~ 22060645 (+)
G51926 NA other upstream 626829 21903542 ~ 21904077 (+)
LOC120559721 cacna1s,LOC103368470 other upstream 722992 21783217 ~ 21807914 (+)
birc5b LOC107086758,LOC102206178,LOC102295711,LOC100709346,LOC106950807,LOC103141143,LOC106920826 other upstream 810783 21717109 ~ 21720123 (+)
G52210 LOC104964406,LOC106525460,LOC105931770 other downstream 21724 22556329 ~ 22560328 (+)
LOC120559933 NA other downstream 27549 22562154 ~ 22562521 (+)
lamtor5 lamtor5,LOC102787529 other downstream 307439 22842044 ~ 22846938 (+)
atxn7l2b kcnc4 other downstream 456647 22991252 ~ 23068479 (+)
tmem201 tmem201,LOC102777799 other downstream 1211760 23746365 ~ 23765165 (+)

Expression


Co-expression Network