itchb (itch,LOC100697163,LOC101474118,LOC102781723)


Basic Information

Item Value
gene id itchb
gene name itch,LOC100697163,LOC101474118,LOC102781723
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 31162519 ~ 31191356 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800310.1
TTGTTTCGATCACGTGACGTGATCTTACGAAGATGGTGGAAGTTTCCTCTTCCTTGAAGTGAAGCCCCGACTGAAACCTCAACATCCTGCACACCTAGGGTAGGGGGTTCACTGCAGCGTTAACAGTTTGGTTTTACAGCCCCCCTTCCGATCTGGGCCTTCACCCCAGCCCTATGTCATGGCAAGTGGAGTCACCAAGTCGAGCACTTCCAACGGTTTACCTATGAAGGCACAGCTACAAATCATTGTGCTATCAGCAAAACTAAAAGAGAACAAGAAAAACTGGTTTGGTCCCAGTCCTTATGTGGAAGTGACAGTCGACGGCCAGTCCaagaaaacagagaaatgcAACAACACCCACAGCCCCAAATGGAAGCAGCCGCTCACTGTGATTGTGACTCCATTCAGCAAACTGGTGTTTCGCGTCTGGAGCCACCAGACCCTGAAGTCAGACGTGTTGCTAGGCATGGCCACGCTGGACGTCAGTGACACGCTCAAGTCTAATGACATGACAATCTCGGAGGTGGTGCAGACCTTACAGCTGTGTGCAGACCGAGACCTGTCAGATGTGGTTGGAGACCTGTCGGTCTGCCTGGACGGCATGACGGTCGACGCCGAGATGTTCGCCGCCGCCGAGGCCGACCATCACAGTACATCAAATGGGGAATCATCGCAAACCAATGGGGATCATGTCATAAGGCGGAGTCGGGACAGCTCCCCAGCTGTGGACGCTGTAGAGCACAGGTCTTCTCCCAGTGGCCGGAGGTCAGCCAACAGCACAGGGTCTCCTTCAGTGTCATCAGGGGGCTCGAGGCCTCTCCGACCACCCAGGCCCTCCAGACCTCCTCCTCCAACCCCACGCAGACCAACCTCTTCACCAGCACCGTCCAGTAATGGCTCTGCGCCAGCTGATGGCAGCGATGGTCAGTCTGGTTCTGATACACCAGTGCGTACACCGGCCTCAGGACCCTCACCAGCCCCAGAATCAAGTCCATCGACAGGCTCAGACACAAACTCCACACCGGCCTCCAGCTCTGGAGCTGCTGCAACCAGACAGCCGGCCAGCAGCATCACCCCTGCTGTCATCCCAAGAGTCCCCGCTGTCAACGCTGTGCCATTGCCCCCTGGGTGGGAGCAGAGGGTGGATCAGAACGGCAGGTTGTATTTTGTCGATCACGTGGAAAAGAGAACAACGTGGGAACGCCCTGAACCACTGCCCCCGGGCTGGGAACGTCGTGTCGACCAGATGGGGCGGGTCTACTTTGTCGATCACATGACGCGAACCACCACCTGGCAGCGTCCCACAATGGAGACGGTGCGTAACTACGAGCAGTGGCAGCACCAGCGCAGCCAGCTACAGGGCGCCATGCAGCAGTTCAACCAGAGGTTCATATTCGGGCTACAAGACCAGGGCTCAGCCACTCAGAATAAGGATTTTGATCCTCTCGGGCCTCTGCCACATGGATGGGAGAAGAGAACAGACACAAATGGCAGAGTTTATTTTGTACATCATTCTACGCGGACAACACAGTGGGAGGACCCACGAACACAGGGTGTGCTGAATGAGAAGCCACTTCCAGAGGGCTGGGAGATGAGGTTCACTGTAGATGGCATTCCCTACTTCGTAGACCACAACAGGAGAACAACCACCTACATCGACCCTCGCACTGGAAAATCCTCACTTGAAAACGGACCTCAGATCACCTACGTTCGAGACTTTAAAGCCAAAGTACAGTACTTCAGATTCTGGTGCCAGCAACTGTCATTGCCTCAACACATCAAGATCACCGTAACCAGAAAAACCCTGTTTGAGGACTCCTTCCAGCAGATAATGAGCTTCAACGCTCAGGATCTGCGGAGGAGACTATGGATAATCTTCCCAGGAGAAGAAGGCCTCGACTACGGAGGCGTGGCCAGGGAGTGGTTCTTCCTGTTGTCCCATGAAGTTCTGAACCCCATGTACTGCCTGTTTGAATATGCCGGTAAAGATAACTACTGTCTGCAGATCAACCCTGCCTCTTACATCAACCCGGACCACCTCAAGTATTTTAAGTTCATAGGACGCTTCATTGCTATGGCTCTTTTCCATGGCAAGTTCATCGACACCGGTTTCTCACTGCCATTTTACAAGCGCATCCTAAACAAGCCATTGGCCCTCAAAGATCTGGAGTCAATAGACGAGGAGTTCTACAACTCCCTCATGTGGATCAAGGATAACAACATCGAGGAGTGTGGGCTAGAGATGTACTTCTCTGTTGACAAAGAGATCCTGGGGGAAATCTCCACCCACGAGCTGAAACCAGACGGAGGAGACCTCCCAGTCACTGAGGAGAACAAGGAGGAGTACATCAGACTGGTAGCAGAGTGGAGGATGTCCAGAGGAGTGGAAGAGCAGACACAGGCTTTCTTTGAAGGCTTCAACGAAGTTCTCCCTCAGCAGTACCTGCAGTACTTTGATGCTAAAGAGCTTGAGGTGATGCTGTGTGGTATGCAGGAGATCGACCTTGCAGACTGGCAGAGAAACACTATCTACAGACACTACGCTCGAAGCAGCAAACAGATCGTCTGGTTCTGGCAGTTTATAAAGGAGATGGACAATGAGAAGAGGATGAGGCTGCTGCAGTTTGTCACCGGTACCTGTCGCCTGCCTGTAGGAGGCTTTGCCGACCTAATGGGAAGCAATGGTCCCCAGAAGTTCTGCCTTGAGAAGGTGGGGAAAGAAAACTGGCTTCCCAGAAGCCACACGTGCTTCAACAGACTGGACTTGCCACCCTACAAGAGCTACGAGCAACTGAAGGAGAAGCTGATGTTTGCTATCGAGGAGACAGAAGGCTTCGGACAGGAGTGATAGAAACCAGGAGAAGTTTGAATAGTGGGTGCAGGAGTCTGAAGGAGTATAGACTACCAGAGTTCAAATCAGGGAGCCCCTTCAGAAAAAAAAGCGGGTGTTTTATGTGTTTCTgctcatgcatgcatgcacacacctgTATGGTACTtctatgggtgtgtgtgtgagactgttgCCTGCATGTTATTGCAAAGGAGCTGGGATTTGCATCTACGCCATGCTCGCAGCAGGCCTCTCAATGCTTGATTGGTACGTGGAaattttttattctttgaaaCCAAAACACAGAAGGTGCTCCGAATCTCTCAGAATGTGTGGCAAATTATGCATGGGATCCTGAAAACTCACCCTCCGTGACATCTGTTTTAAAGGGGCTGCAGTAGTTTTTCCTCCCCGCACATGATCATCATGCAGTGACAGGCAACAGGGTGGCCTTGGGGCTACAGTCGAAATCTCATAACCAGAAGGGTCCCAGGTTCTAACAGTAGCGTCTCCTCAAAGTGTCTTTGACTAGCTGATTTATTCTTATTTAGTTGCTCTGCATTAAAGCATCTGGTAAATGTCAGGGTTTATTTTAAGGCAAGATTAAGAgggtgtgcttttttttttttttctcaaaggcTTAAGTTTCACCAAAAAGCTAACTTTGTTGCTCTAAGATTGTTTGTTGCATCCACTTTTAGCATCATCCACATTGTCATTCCCCATCACATCCTCAAATCTCTCACACTTTCATCTGCATATCTACTCATGACTAAAgtggatgttgttttttttcttcttttttttaaagtaacgtgtgaaaatataaaatgataGCTACGTCATAGTGAATTTATAAAGAGTGCCCCAAAATAATGCTTAACTAACAAGACAATCTTGGTGCTGCAAAGAGATTTGGGCATCATGCCTAATATAAAACACAAGAAAGAAAGTGTTATGTGTTCCCAGTTCTATAGTATGTGATCTACGAATCACTTAATAATTGTGAAAAGTGTTGTAGCCTCCATTATTTATAGTGGTGGCAAATGTGGAAGACTGACCCTAGTTTTATAGGGCTGTAGTTTTTACGCTGTGATGGGGTATGGGACATCTTGGATTAGAGTATTCTGGGAGTATTTCATAAGTTATTCATCTTAATATCGGCTTCAGAAAAATTTTACACCTTCCTTAATTTGAATTCATTGGGCGATCTGAAGAAATCCATTTGGGATGAAATAAGcattttaagatatttatgtatttagtaCTCAAGATGTACTTGACTTAATGTATCAGAacttgaaaaaatgacaaaacgcAAAAGACAAGTGAAAAACACCACATGCAAGTCAAACTAAATCTTTTAAGTTTAGGTAAAatcttttaataatattttgaatgCATACTttgcaaaaagaaaattg
>XM_039800311.1
CTAGTTGGATTAACTAATTATGTCATTTCTACCAGCATAGTTTAGCGTACCAAAAAGGCAATGTGGAGGGATAATGATTACAAATAAGTGGCCGTTGTCAGTTATTGACATACATGCTGGTTACTAGTAGCTACAGTTTGAATTAAAGGAATGATTTGGAGTTGTTTTCCCTTTTTGCTAAATTACGTGTCTTCACATGGCGAGAACAGTACACCGAACTCAATTTAATATCTGGCAACGTTAACGCCTTCACCCCAGCCCTATGTCATGGCAAGTGGAGTCACCAAGTCGAGCACTTCCAACGGTTTACCTATGAAGGCACAGCTACAAATCATTGTGCTATCAGCAAAACTAAAAGAGAACAAGAAAAACTGGTTTGGTCCCAGTCCTTATGTGGAAGTGACAGTCGACGGCCAGTCCaagaaaacagagaaatgcAACAACACCCACAGCCCCAAATGGAAGCAGCCGCTCACTGTGATTGTGACTCCATTCAGCAAACTGGTGTTTCGCGTCTGGAGCCACCAGACCCTGAAGTCAGACGTGTTGCTAGGCATGGCCACGCTGGACGTCAGTGACACGCTCAAGTCTAATGACATGACAATCTCGGAGGTGGTGCAGACCTTACAGCTGTGTGCAGACCGAGACCTGTCAGATGTGGTTGGAGACCTGTCGGTCTGCCTGGACGGCATGACGGTCGACGCCGAGATGTTCGCCGCCGCCGAGGCCGACCATCACAGTACATCAAATGGGGAATCATCGCAAACCAATGGGGATCATGTCATAAGGCGGAGTCGGGACAGCTCCCCAGCTGTGGACGCTGTAGAGCACAGGTCTTCTCCCAGTGGCCGGAGGTCAGCCAACAGCACAGGGTCTCCTTCAGTGTCATCAGGGGGCTCGAGGCCTCTCCGACCACCCAGGCCCTCCAGACCTCCTCCTCCAACCCCACGCAGACCAACCTCTTCACCAGCACCGTCCAGTAATGGCTCTGCGCCAGCTGATGGCAGCGATGGTCAGTCTGGTTCTGATACACCAGTGCGTACACCGGCCTCAGGACCCTCACCAGCCCCAGAATCAAGTCCATCGACAGGCTCAGACACAAACTCCACACCGGCCTCCAGCTCTGGAGCTGCTGCAACCAGACAGCCGGCCAGCAGCATCACCCCTGCTGTCATCCCAAGAGTCCCCGCTGTCAACGCTGTGCCATTGCCCCCTGGGTGGGAGCAGAGGGTGGATCAGAACGGCAGGTTGTATTTTGTCGATCACGTGGAAAAGAGAACAACGTGGGAACGCCCTGAACCACTGCCCCCGGGCTGGGAACGTCGTGTCGACCAGATGGGGCGGGTCTACTTTGTCGATCACATGACGCGAACCACCACCTGGCAGCGTCCCACAATGGAGACGGTGCGTAACTACGAGCAGTGGCAGCACCAGCGCAGCCAGCTACAGGGCGCCATGCAGCAGTTCAACCAGAGGTTCATATTCGGGCTACAAGACCAGGGCTCAGCCACTCAGAATAAGGATTTTGATCCTCTCGGGCCTCTGCCACATGGATGGGAGAAGAGAACAGACACAAATGGCAGAGTTTATTTTGTACATCATTCTACGCGGACAACACAGTGGGAGGACCCACGAACACAGGGTGTGCTGAATGAGAAGCCACTTCCAGAGGGCTGGGAGATGAGGTTCACTGTAGATGGCATTCCCTACTTCGTAGACCACAACAGGAGAACAACCACCTACATCGACCCTCGCACTGGAAAATCCTCACTTGAAAACGGACCTCAGATCACCTACGTTCGAGACTTTAAAGCCAAAGTACAGTACTTCAGATTCTGGTGCCAGCAACTGTCATTGCCTCAACACATCAAGATCACCGTAACCAGAAAAACCCTGTTTGAGGACTCCTTCCAGCAGATAATGAGCTTCAACGCTCAGGATCTGCGGAGGAGACTATGGATAATCTTCCCAGGAGAAGAAGGCCTCGACTACGGAGGCGTGGCCAGGGAGTGGTTCTTCCTGTTGTCCCATGAAGTTCTGAACCCCATGTACTGCCTGTTTGAATATGCCGGTAAAGATAACTACTGTCTGCAGATCAACCCTGCCTCTTACATCAACCCGGACCACCTCAAGTATTTTAAGTTCATAGGACGCTTCATTGCTATGGCTCTTTTCCATGGCAAGTTCATCGACACCGGTTTCTCACTGCCATTTTACAAGCGCATCCTAAACAAGCCATTGGCCCTCAAAGATCTGGAGTCAATAGACGAGGAGTTCTACAACTCCCTCATGTGGATCAAGGATAACAACATCGAGGAGTGTGGGCTAGAGATGTACTTCTCTGTTGACAAAGAGATCCTGGGGGAAATCTCCACCCACGAGCTGAAACCAGACGGAGGAGACCTCCCAGTCACTGAGGAGAACAAGGAGGAGTACATCAGACTGGTAGCAGAGTGGAGGATGTCCAGAGGAGTGGAAGAGCAGACACAGGCTTTCTTTGAAGGCTTCAACGAAGTTCTCCCTCAGCAGTACCTGCAGTACTTTGATGCTAAAGAGCTTGAGGTGATGCTGTGTGGTATGCAGGAGATCGACCTTGCAGACTGGCAGAGAAACACTATCTACAGACACTACGCTCGAAGCAGCAAACAGATCGTCTGGTTCTGGCAGTTTATAAAGGAGATGGACAATGAGAAGAGGATGAGGCTGCTGCAGTTTGTCACCGGTACCTGTCGCCTGCCTGTAGGAGGCTTTGCCGACCTAATGGGAAGCAATGGTCCCCAGAAGTTCTGCCTTGAGAAGGTGGGGAAAGAAAACTGGCTTCCCAGAAGCCACACGTGCTTCAACAGACTGGACTTGCCACCCTACAAGAGCTACGAGCAACTGAAGGAGAAGCTGATGTTTGCTATCGAGGAGACAGAAGGCTTCGGACAGGAGTGATAGAAACCAGGAGAAGTTTGAATAGTGGGTGCAGGAGTCTGAAGGAGTATAGACTACCAGAGTTCAAATCAGGGAGCCCCTTCAGAAAAAAAAGCGGGTGTTTTATGTGTTTCTgctcatgcatgcatgcacacacctgTATGGTACTtctatgggtgtgtgtgtgagactgttgCCTGCATGTTATTGCAAAGGAGCTGGGATTTGCATCTACGCCATGCTCGCAGCAGGCCTCTCAATGCTTGATTGGTACGTGGAaattttttattctttgaaaCCAAAACACAGAAGGTGCTCCGAATCTCTCAGAATGTGTGGCAAATTATGCATGGGATCCTGAAAACTCACCCTCCGTGACATCTGTTTTAAAGGGGCTGCAGTAGTTTTTCCTCCCCGCACATGATCATCATGCAGTGACAGGCAACAGGGTGGCCTTGGGGCTACAGTCGAAATCTCATAACCAGAAGGGTCCCAGGTTCTAACAGTAGCGTCTCCTCAAAGTGTCTTTGACTAGCTGATTTATTCTTATTTAGTTGCTCTGCATTAAAGCATCTGGTAAATGTCAGGGTTTATTTTAAGGCAAGATTAAGAgggtgtgcttttttttttttttctcaaaggcTTAAGTTTCACCAAAAAGCTAACTTTGTTGCTCTAAGATTGTTTGTTGCATCCACTTTTAGCATCATCCACATTGTCATTCCCCATCACATCCTCAAATCTCTCACACTTTCATCTGCATATCTACTCATGACTAAAgtggatgttgttttttttcttcttttttttaaagtaacgtgtgaaaatataaaatgataGCTACGTCATAGTGAATTTATAAAGAGTGCCCCAAAATAATGCTTAACTAACAAGACAATCTTGGTGCTGCAAAGAGATTTGGGCATCATGCCTAATATAAAACACAAGAAAGAAAGTGTTATGTGTTCCCAGTTCTATAGTATGTGATCTACGAATCACTTAATAATTGTGAAAAGTGTTGTAGCCTCCATTATTTATAGTGGTGGCAAATGTGGAAGACTGACCCTAGTTTTATAGGGCTGTAGTTTTTACGCTGTGATGGGGTATGGGACATCTTGGATTAGAGTATTCTGGGAGTATTTCATAAGTTATTCATCTTAATATCGGCTTCAGAAAAATTTTACACCTTCCTTAATTTGAATTCATTGGGCGATCTGAAGAAATCCATTTGGGATGAAATAAGcattttaagatatttatgtatttagtaCTCAAGATGTACTTGACTTAATGTATCAGAacttgaaaaaatgacaaaacgcAAAAGACAAGTGAAAAACACCACATGCAAGTCAAACTAAATCTTTTAAGTTTAGGTAAAatcttttaataatattttgaatgCATACTttgcaaaaagaaaattg

Function

symbol description
itch Enables several functions, including arrestin family protein binding activity; ubiquitin protein ligase activity; and ubiquitin-like protein ligase binding activity. Involved in several processes, including negative regulation of defense response to virus; positive regulation of receptor catabolic process; and protein ubiquitination. Acts upstream of or within ubiquitin-dependent protein catabolic process. Located in cytoplasmic vesicle; nucleoplasm; and plasma membrane. Part of protein-containing complex. Colocalizes with early endosome.

NR:

description
E3 ubiquitin-protein ligase Itchy-like

GO: NA

KEGG:

id description
K05633 WWP1, AIP5; NEDD4-like E3 ubiquitin-protein ligase WWP1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800310.1 False 4254 mRNA 0.48 24 31162519 31191356
XM_039800311.1 True 4343 mRNA 0.47 24 31162519 31190858

Neighbor

gene id symbol gene type direction distance location
e2f1 e2f1,LOC102780950 coding downstream 20645 31128228 ~ 31141874 (-)
LOC120558334 NA coding downstream 37428 31113760 ~ 31125091 (-)
ctnnbl1 ctnnbl1 coding downstream 104943 30988074 ~ 31057576 (-)
LOC120559110 vstm2l,LOC101479893,LOC102782703 coding downstream 181343 30928243 ~ 30981176 (-)
zgpat zgpat,LOC102796033 coding downstream 259611 30896977 ~ 30902908 (-)
trnaq-uug_1 NA coding upstream 35704 31227060 ~ 31227131 (-)
LOC120559902 twist3b,LOC104929895,LOC103352822 coding upstream 274412 31465768 ~ 31469785 (-)
LOC120559355 klf15,LOC103367789,LOC101076255 coding upstream 1190528 32381884 ~ 32392543 (-)
cpne9 cpne9,LOC100694516,LOC101469997,LOC102776939 coding upstream 1221708 32413064 ~ 32511065 (-)
si:ch211-220i18.4 LOC103373814,LOC108233036,LOC102211047,LOC100693975,LOC102782987,LOC102291816 coding upstream 1378952 32570308 ~ 32586963 (-)
G54509 NA non-coding downstream 64334 31097980 ~ 31098185 (-)
G54508 NA non-coding downstream 97547 31064741 ~ 31064972 (-)
G54470 NA non-coding downstream 273301 30889018 ~ 30889218 (-)
G54444 NA non-coding downstream 376722 30785093 ~ 30785797 (-)
G54414 NA non-coding downstream 455758 30655670 ~ 30706761 (-)
G54549 NA non-coding upstream 43891 31235247 ~ 31235474 (-)
G54567 NA non-coding upstream 155925 31347281 ~ 31350577 (-)
G54599 NA non-coding upstream 300200 31491556 ~ 31527860 (-)
G54600 NA non-coding upstream 307421 31498777 ~ 31500889 (-)
G54609 NA non-coding upstream 431765 31623121 ~ 31623330 (-)
tafa5l LOC102786421,LOC104919510,LOC100700110,LOC103384901,LOC106518908,LOC107086703 other downstream 1089820 29971196 ~ 30072699 (-)
cdk11b LOC103366252,LOC101466870,LOC100697195 other downstream 1396646 29752661 ~ 29765873 (-)
clcnk clcnka,LOC104952128,LOC102786725 other downstream 1669544 29474503 ~ 29492975 (-)
LOC120559896 slc25a45 other downstream 1806635 29350078 ~ 29355884 (-)
ajap1 ajap1 other downstream 2133198 28971286 ~ 29029321 (-)
LOC120558955 LOC104919264,LOC102777709,LOC100695043,LOC102209489,LOC103373809,LOC103152775,LOC101470785,LOC106963186 other upstream 1101586 32292942 ~ 32323275 (-)
LOC120559593 plxnb1,LOC103373813,LOC107100289 other upstream 1399627 32590983 ~ 32666459 (-)
G54756 LOC107088573,LOC106566972 other upstream 1576001 32767357 ~ 32773486 (-)
G54834 NA other upstream 1688837 32880193 ~ 32887290 (-)
zgc:158296 NA other upstream 1775279 32966635 ~ 32971163 (-)

Expression


Co-expression Network