LOC120559012


Basic Information

Item Value
gene id LOC120559012
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 24442888 ~ 24497151 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800437.1
AGCCTATGGGTGCCCGCCGGTTATAGTGTATGACAGCAGTCATTCCACGCGCACCGTCTTCAGAGTCACTGCGTGTCCTTTGACCTCTGTCGCTTCTAAAATAGAGAAAGGACCTTGTGGAGACTTGAGTCAGAGTTGCAGTTGTTGACTGCGCAGTTTTGGCCGTCAGTCAAAGAGTTTGGCACGTTGGGCTTCTGAGGTAAAGTAGCTACGTAATACGTGAAACGTTTGCTGCAGGAATTGCGATGATTGTCATATCGCGGACACAAAGTTCGCATCACTTGTAACTTTTGGACAAAACGAGCTTCTCCTGAGGGAACTGAAGACGACACCTCGATAGGTAGAAGACTCTTCTCCAGTTGCTCGTCTAATGGGTCTTCTGTGCCTTACAAATCCCAAGTGACGCCAGTTGATCTGCATCAACACATTCTCCTGATCTCTAGTGTCTCCATCAACCAGTGGAGGGAGATGATGGGGGTGGGGAGCCTGCAGCTTGTTCTGCTTTTGGCCTTGACCTCCACATCCACAGGCCTCAACATCCCTCTGGAAGTGGAGCAGCCTCCAACCATAATAACTCACACAGCTGGTCCCATTATTGCCCTTCCTTTTGACAAGACCATTACTATCAGGTGTGAAGCCAGTGGCAACCCTCCACCAGAATACAGATGGACAAAAGATGGCAAGGAAACAGACCACACGAATGGAACTTTAGTGTTTCAAATCGAGCACCTTGAAAAGTATCTCGGTAAATACAGATGCTACACTTCTAACAAGCTGGGAACTGCCATGACGGAGGAGATTGAACTGAGAGTTCCTAgtgTCCCCAAATTTCCGAAGGAGTATAATTCCCCTATTGTTGTTAAGGAGGGAGAGCCAATCACCCTGGAGTGTAACCCTCCAGAAGGCGTGGCCCCACGTAAAATCTACTGGATGACCCTTGGTCTCGAGCACATTGAGCAGGATGAGAGGGTTTCCATGGGCATTGATGGCAACCTGTACTTCTCTAATGCCTTACAGAAAGACACTCGTCAGGACTACTGTTGCTTTGCTGCCTTCTCCAAAATACGCACCATCGCCCAGAAAACCGCCATGTCTGTTGTGGTCAAGAGCTTGAAAAATGGCAATGAATCTGCTGACAGTGACAATGCCACTGAAGCCCCCGCAGTGAGAATGCCTGGCCTGCTGCTGCCCTCTGGTGTTCAGACAGAGATGGTGCTGTTGAAGGGAGAGCATCTCCAGCTTGAGTGTATACCACAGGGATATCGCAGACCCACCTACTGCCAGCTGACCGTGATCGGGTCTGATGTTTACATCAAGTGCTCGGTCAGTGGAAAGCCACAGCCAGAGATAACATGGAGGAGGAATGGAGAGTTTTTCAGAGATGACCCAGAGAACAACAGGCGAGTGCTCGATGACACTGTGGTGCTCCATAACGCCAGACCAGAGGACAGTGCTGTCTACCAGTGTGAAGCCTCCAATGATCATGGCAGTGTTCTGGCCAACATTAACATCATGGTCATAAACATGGCTCCTCGGATATTGACAAGGGATAACCAAGAGTACGCTGTAGTACTAGGAGGGGATGTCATCATGAACTGCAGTGTTTTCAGCTCTCCACCATCAAACATCTCATGGTCCAATGATGAGAAAGCCATCGAGGGAGAACGATTTCTTGCTCTGAGTGGATCTTTGCAAATCATTGGTGCAGAAAAAAACGACAGTGGGAAATATGTGTGTGTCGCCTTTAACACAGAGGGCAAGTCAGCTGTCACTGCTTATCTGGATGTGAAAGaCCCTACAAAAATAGTAATTCCACCTCAGGACTTGCAGATCATCAGTGGGACCACAGCCCAGTTGAAGTGCCAGGCAGAGTATGATAAAAGCCTGCAGGGTGCCTTTGAGGTGGTATGGAGGAAGGATGGTGAGGAGATCCCACTTTCCTTTGAGGAACATTCCAGATACTTTGTGGACGATGGCATGCTGCAGATCATGAATGTGAACCAGAGCGATCAGGGAATATACACATGCATTGCTAGAACCAGCATAGACGAGGACAATGCCACTGCACTGCTCACCGTGCTGGACATTCCCGATGCTCCAAAAAATATAAAGATATCTGAACTCAAGAGTCCGAGAAATGTTCACCTGTCTTGGATACCTGGGAGGGATCACAACAGCTCTGTAACAGAATTTATAGTGGAGTACGAGGAGAACCAATGGGAGCCTGGCAGGTGGAAGGAGCTACAGAAAGTTCCCGGTAACCAGGCAACAGCCGAGCTATCACTACGTGGACACCTTAACTACCAGTTCAGAGTGTATGCTGTTAATGCTGTTGGACCTGGACCCCCCAGTGAGCCCACTGAGAGATACAAAACACCCCCTGCTGCTCCTGAGAGGAACCCAGAAAACATCAAAATTCAAGGCCATCTTCCTCATCAAATGGACATTAGCTGGGAGCCGCTGTTGCCTATTGAACACAATGGGCCAGGCCTGGAGTACAAGGTGAGCTACAGGAAACTGGGGGTGGAAGATGACTGGAGGGAGCATCTGGTCAAAAGACACTCCTTTGTTGTGAGGAACACGTCCACTTTTATTCCCTACGAGATCAAAATTCAGAGCAGGAACAGCCACGGCTGGGGACCAGATCCTAAAGTCGTTACTGGTTACTCTGGAGAAGATGTTGTCTTTTGGCATTGTCTGCGGGAAAATGTGTCAGTCCCGACTGCCGAACCACGGGACATAGCAGTGGAGGTGATCAACACCACTGTTCTGAGAGTTAGCTGGACCCCGGCTCCACCTGCCACAGTGAGAGGTCATCTAGGGGGCTATGATGTTCACTGGTCGAGGAAACGGAGTTTGCTGAATCCCAACAAGATTTTAGATGAGAGCCAGACCCTGTCTTTTCCTGGGAAGAGGACTCATGCTATCGTACCGGGCCTCAAACCTTTCTCTGAGTACAGGCTCACTGTCAATGTTTTCAACAAGAAGGGCAATGGGCCCAACAGTGACCCGGTCACCTTCAACACTCCAGAGGGAGTTCCTGCGCAATTGCCCATCCTGACTGCCTCCAACGCCCAGAAAGACTCCATTTTGCTGGTATGGGGCCCACCGCTGGAGACAAACGGCATCCTCACTGGTTATCTCCTGCAGTACCACCTcaTTAATGAGACCACACTGGAGGTGGTTGATTCCCAGGAGAAGAACATCACTGAGGCTGACACCACCCAGTGGCAGCTTCAGGGCTTAGAGGAGGGCAGACTCTACCGCTTCCACCTCAGTGCCTGCACTCGAGCAGGTTGTGGACCTGCGCTGGCTCAGGAGAGCAGCACCGTTGCTCAAGCACATTTGTCCCCGACTCCAGCTGTGGCCCCTGTTCAGAGCAGTATGTATCACTGCCTGCTGCAGCCGCTGCAGCTCGCTAACTTAGAAGTAGTGGTAGAGATAGACATggttgtaggtgtgttggtgtATCTGGCTGTGGCATCAGTAAGGTTTGTCCTTTATACATGTAGTTGTACAGTTCCAGCCCTGTTGAACATAAGCTCTTATGTGAGTGACACCTTTGCCAAAATCAGCTGGACTGCCAGAGAAGAGCAGCAGGACTCTGAGCTTTATGTGGCTTATATGAATAACCGTGATGGTAACTGGCGGATTTCAGAGGCTGTAAacacttctcaaagtttccacGTAATTGATGGGCTCAAACCTGGGACGATGTACACCGTGCGCCTCATGGCCAAGAGCCTGCTCGATAACGCTAGCATTTTTGAAGACGTTATCGAGACTCGAGTCAAAGGCGCAGCAGGTCAGCAGAGCGACTTTTCGACCCAGGGCTGGTTCATTGGGACCATGTGTGCCGTGGCGCTCCTCACCCTTGTCACACTCATGGCCTGCTTTGTGCGGAGAAACAAAGGTGGCAAGTATGCAGTGAAAGAGAAGGAGGACCTCCACCCTGACGTAGAGTCACAAGGGATGAATGATGACACCTTCTGTGAATACAGTGACAGCGAAGAGAAGCCACTGAAGGGCAGTAGCTCGCGTTCCCTGAATGACGCGTTGGGGGACAGCATCAGCAGAGACAGCCTGGTTGACTATGCCGATGGTGGAAGAGAATTCAATGAGGATGGTTCATTTATTGGAGAATATTCCGGACGCAAGCACAGAGGCTCTGTTAGTGAGCCTAGTGGACCCAGACCAGTCACTGCATAAAACCTACTTCCAGATAAAACGGTCTGCTTCAAATCTTTTCAAACTCTTTTCAAGATACTGGTTAAAATTTAGCTTCACTGGCATTACATATAACTTGAATAGTCAAATATGGGGaaataaaaatgactcaaatgtGCAGAAGTTTTGCCCAGGGACTGGAAAGGAAAGAATAAACCCACCATACATATCAAACCATGTAAGTCTTTGTACATACTGTAAGAGAATGACCTGTATCATTTGATTTTTTCAAGATTttattaatgaaaataaagtgtttttgtaTCTATAAACCATGATCTTAAGCTGTGTATATTGAACAATGAAAATGTCcagtacagtatgtattttttttacagtggatGAGACACATGCAGTACAAATACATATGCATGTACAGCCTGTGTTCATTCATTTAACACACAGTGGAATCAATATCTGCTGTAGTCATTTTCTGTCCATTACTGTCTATTTTATGTATGTAATTTTATGTTTCTGACTTTTGTTAATATGCATGTTGATATGCAAAAGTGTGAAAGTTGATAGTTTGTTTATTATCAACATGCTGAAGATACATTTTATATCATTATACCAAACCTATTTTGGaactttttttattgctttatcAATCAGGAGACAACAACGTAAACATAAGAACATTAACTAAAACAAATAACATTAACACAAGAACAAATTTAAGTATCAAATTCCTTTGCTGTAATTCGCCCAACCAACCATGCCCCTGGTTAGTTGAGGGAATTACATCAAGGATATATAAGTTATTTAGCAAGACGGTCAAAGTGATAAGTGTATTGCTGCATTTATCACTGAAGACTTGGAAATATGAATACATGTATTTAAACAACTTATCTAAACTCTTAATTGGTGAGCATTCACTTTAAGGCCCCAGTAATGAAGAGGAGGTTTTGAAACTAAAGCAGTTTGTCGCAATACATGCAATGAATCCTCACATGTATAGTGAATGTTGCTAAAATATTCATCAAGGATGTACTGTAAGTAAAGTTGAAATTTGTCCAATTCAACAATCTTCCTTAAACAGATGTAACCATGCCGAATACAGCAGCGATGCCAGCTACTAAGTAATAAATGTTTCATTGGCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800437.1 True 5328 mRNA 0.46 29 24442888 24497151

Neighbor

gene id symbol gene type direction distance location
dffa dffa coding upstream 108821 24325261 ~ 24334067 (+)
casz1 casz1 coding upstream 189101 24204375 ~ 24253787 (+)
c5h1orf127 LOC104954118 coding upstream 421964 24013889 ~ 24020924 (+)
pgd pgd coding upstream 441452 23994946 ~ 24001436 (+)
kif1b kif1b coding upstream 449196 23928466 ~ 23993692 (+)
cntn3a.1 NA coding downstream 62256 24559407 ~ 24630995 (+)
ttll9 ttll9 coding downstream 213632 24710783 ~ 24715633 (+)
ppp1r3da ppp1r3d,LOC104919428,LOC100701819 coding downstream 222624 24719775 ~ 24721848 (+)
sycp2 NA coding downstream 225138 24722289 ~ 24750342 (+)
pigt pigt,LOC102793327 coding downstream 288812 24785963 ~ 24793102 (+)
G52756 NA non-coding upstream 52761 24387153 ~ 24390127 (+)
G52742 NA non-coding upstream 80621 24360806 ~ 24362267 (+)
G52728 NA non-coding upstream 168852 24270121 ~ 24274036 (+)
LOC120558580 NA non-coding upstream 368880 24061063 ~ 24074008 (+)
G52629 NA non-coding upstream 429587 24012963 ~ 24013301 (+)
G52817 NA non-coding downstream 208387 24705538 ~ 24705906 (+)
G52827 LOC107550338,LOC103365918,LOC107551495,LOC104947949 non-coding downstream 254744 24751895 ~ 24753180 (+)
G52892 NA non-coding downstream 462665 24959816 ~ 24960103 (+)
LOC120558677 NA non-coding downstream 512838 25009989 ~ 25015398 (+)
G53056 NA non-coding downstream 1312562 25809713 ~ 25811047 (+)
ctnnbip1 ctnnbip1 other upstream 628482 23791447 ~ 23814406 (+)
tmem201 tmem201,LOC102777799 other upstream 677723 23746365 ~ 23765165 (+)
atxn7l2b kcnc4 other upstream 1374409 22991252 ~ 23068479 (+)
lamtor5 lamtor5,LOC102787529 other upstream 1595950 22842044 ~ 22846938 (+)
LOC120559933 NA other upstream 1880367 22562154 ~ 22562521 (+)
LOC120559118 LOC102791662 other downstream 443644 24940795 ~ 24945320 (+)
G52871 LOC104956590 other downstream 456291 24953442 ~ 24957330 (+)
tprg1l tprg1l,LOC102784883,LOC106513028 other downstream 1246438 25743589 ~ 25748321 (+)
G53096 ybx1 other downstream 1574434 26071585 ~ 26076664 (+)
G53232 LOC104966952,LOC103362776,LOC102800046,LOC102208894 other downstream 1855309 26352460 ~ 26353463 (+)

Expression


Co-expression Network