LOC120559018


Basic Information

Item Value
gene id LOC120559018
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 26266807 ~ 26274788 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800443.1
ATGTCGGTGTATAATGAGCTCCGTCTGAAACAAGAGCTTTGTGACGCAGTGATCAGAGTGGACAACGTTGAATTTCACATGCACAAAATCCTCCTCTGCAACTGCAGCCTGTACTTCAAAGCCCTCTTTGCCACCTGGTCAACCCCAGACAGTCGGGTCTTTGACATTCCCAATGTGTCCCCCGACATGATGAAGCTCATCATTGAGTTTGCCTACACTGGCTTTGTTCCTGTGACACAAAATAATATACGAGAGCTTTTTATCGCAGCAGACCGGTTCAATGTAATGGGCATCATACAAGCCTGCTGTGACCTCCTGGAGAAGCAGCTGACCCCACAAAACTGCATAGGCATCTGGTGGTTCACAGACATCTATTACACCCCTGAACTGAACCACAAGGCATTCCTTTACATGCTGAATCACTTTGAGGAGATTGCTGCCACCTCAGAAGAGTTCCTGCAGCTCTCTGCGCAGGAACTTGCTAAGATCATTGCGAATGACCGTCTCAATGTGAAGCAGGAGAATACGGTGTTTAGGGCTGTCCTTCGCTGGATCGCCTACGCAAATGAGGAACGCAGAGAAAACATCTCTCTGCTTTTGTCCAACGTCAGGCTGGCTTTAATGAGATCAGAATACATCACAGACAGCGTAAGCAACAACGAACTGGTGAAGGCAAGTAAAGATTGTCGACCGATTCTCCTGAGGACCCTGGAGGCCATGCTTGACCTGCAAACAAAGGAGTTCCCTAACTCTATTTCTTATAACCCTTTGGCCCGCCCACGACTGCCCCCTGCCATTCTCTTGGCCATTGGAGGCTGGAGCGGCAGTAGTCCTACCAATGGTATTGAGGCGTACGATGTCCGTGCTAACTGCTGGATCAATGTAACAAACAATGAGGAGGCTCCCCGGGCCTACCATGGCACAGTTTTCCTCGATGGATCAGTATATTGTGTCGGTGGCTTTGACAGTGATGAACAGTTCAGCTCTGTGCACAGGTTCGACCTGGGCACGCACACCTGGCAGGAGGTTACACGAATGCATTCAAGTCGCTGCTATGTCAGCGTAACTGTGATGGACGGGTGCATATATGCCATGGGAGGTTATGATGGACATGATCGACTCAGAAGTGCTGAGCGCTATCAGCCCAAAATCAACCAGTGGACTTTAATTGCGCCCATGCACGTACAGAGGAGTGATGCCAGCTGCACAACCCTCCATTGCAAGGTGTACATTTGCGGTGGCTTCAATGGGAGTGAGTGCCTGTCATCGGCTGAATGTTACGACCCAGAGACCGACCAGTGGACACTGATCGCCTCCATGGCCAGCATGCGCAGTGGAACTGGGGTCATCGCCTATGCAGACCATGTCTTTGCAGTCGGTGGTTTTAATGGAACCAGGTGTCTGCGCACTGCTGAGGCCTACAACCCCCACACCGACACCTGGCACGCTGTGCCCTCCATGCTGGGCTCCCGAAGTCACTTTGGCAGCGCAGTGATAGATGACCGTCTCTATGTGGTCGGGGGCTTCAACGACTTTACCACCATTCCAGACGTTGAGTGCTTTGATGTCGAAGCTGGTGAGTGGTCTGATGTCCGTGACATGGAGATCTCCCGCAGCGCCCTGAGCTGCTGCGTGGTGTACGGACTCCCCAACTTGGCCGAGTATGCTGCCCCTCATCACTCCCTGCACTCCCTGGATGAAGTGGAATGA

Function

GO: NA

KEGG:

id description
K10448 KLHL10; kelch-like protein 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800443.1 True 1710 mRNA 0.52 5 26266807 26274788

Neighbor

gene id symbol gene type direction distance location
LOC120559565 NA coding upstream 6853 26247997 ~ 26259954 (+)
rprd1b rprd1b coding upstream 19525 26236839 ~ 26247282 (+)
her12 LOC101486328 coding upstream 42964 26222495 ~ 26223843 (+)
LOC120558413 LOC103372574 coding upstream 48725 26216514 ~ 26218082 (+)
ubr4 NA coding upstream 54651 26149350 ~ 26212156 (+)
LOC120559111 LOC104966951,LOC104926426,LOC101067761,LOC103384493 coding downstream 91302 26366090 ~ 26374329 (+)
LOC120559112 shmt2,LOC103362774,LOC102296343,LOC102798994 coding downstream 108803 26383591 ~ 26393733 (+)
LOC120559752 slc32a1,LOC103362770,LOC104926430,LOC101482923,LOC102798107,LOC102295106 coding downstream 149325 26424113 ~ 26427752 (+)
bpifcl NA coding downstream 153690 26428478 ~ 26435464 (+)
LOC120559781 chmp4b,LOC103362760,LOC106511320 coding downstream 265112 26539900 ~ 26546310 (+)
G53109 NA non-coding upstream 167172 26096359 ~ 26099635 (+)
LOC120559215 NA non-coding upstream 269713 25995233 ~ 25997094 (+)
G53056 NA non-coding upstream 455760 25809713 ~ 25811047 (+)
LOC120558677 NA non-coding upstream 1251409 25009989 ~ 25015398 (+)
G52892 NA non-coding upstream 1306704 24959816 ~ 24960103 (+)
G53221 NA non-coding downstream 50433 26325221 ~ 26325468 (+)
G53222 NA non-coding downstream 51131 26325919 ~ 26329616 (+)
G53223 LOC103362778,LOC108236819,LOC101165391 non-coding downstream 55296 26330084 ~ 26330628 (+)
G53239 NA non-coding downstream 89654 26364442 ~ 26364837 (+)
G53248 LOC101164642,LOC104966947,LOC100690915,LOC102195969,LOC104926428,LOC101062277 non-coding downstream 122411 26397199 ~ 26402428 (+)
G53096 ybx1 other upstream 190143 26071585 ~ 26076664 (+)
tprg1l tprg1l,LOC102784883,LOC106513028 other upstream 518486 25743589 ~ 25748321 (+)
G52871 LOC104956590 other upstream 1309477 24953442 ~ 24957330 (+)
LOC120559118 LOC102791662 other upstream 1321487 24940795 ~ 24945320 (+)
ctnnbip1 ctnnbip1 other upstream 2452401 23791447 ~ 23814406 (+)
G53232 LOC104966952,LOC103362776,LOC102800046,LOC102208894 other downstream 77672 26352460 ~ 26353463 (+)
LOC120559113 LOC108236696,LOC104966950,LOC103362773,LOC103384494 other downstream 103404 26378192 ~ 26383047 (+)
atp5f1e NA other downstream 168262 26443050 ~ 26444890 (+)
LOC120559571 vapb,LOC100711919,LOC102796136,LOC101481364 other downstream 208744 26483532 ~ 26537351 (+)
gnas gnas,LOC102796627,LOC104936173 other downstream 215654 26490442 ~ 26523888 (+)

Expression


Co-expression Network