LOC120559059 (LOC103370165)


Basic Information

Item Value
gene id LOC120559059
gene name LOC103370165
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 38343487 ~ 38352553 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800481.1
ACTGGGCtgtgattggctagtactcggcGTGACGTCACCTAACCCGGATGAAGAATCGGCCAGAACGAGGTCTCTTCACACACATGTGTTTCTTCCTTCCAGTTAAAGAAATCAGATTTAAGAAACCATGACGTCATTGGCCCAGCAGCTGAAGAGGCTCGCGCTGCCTCAGAGCGACCCCAACCTGCTGACACGCAGAGAGGTCGCCTCGCTGCTCTTTGACCCCAAAGATGCAGCCGCCATGGACAGAAGCACCTTCTACGCCCTCGgCTGCACCGGGCTGGAGGAGCTGCTGGGAATCGAACCTGCGTTCCTGGAGTTCCAGGACACGCTGTTCAGCCGGGCCTCGGTGACCCTGGAGCGCAGCGTTCAGTCCAAAGAGGTCAACGAGAAGCTGGACGCCGGCGTCTCGCTGTTCCTGGCGCGCCTCTGCCCGTACTTCCTCCTCAAGCCGGCGCACAAGTGCATCGAGTGGCTGCTCCACCGcTTCCACATCCAGCTGTATAACAGCGAGAGTCTGCTGGCGTGCGCGCTGCCGTACCACGACACCAACGTGTTCGTCCGAGTCGTGCAGCTCCTCCGCATCAAAGACGCCACAAACCGCTGGAACTGGCTGCACGGACTGCAGAAACCCGGCGTGCCGTTGTCCAGAGCAACCCTGGTCACCCACTGCTACTCAGACCTCAGCTTCATGGACTTCATCTGCTCACTGGTCACCAAGTCCatccagGCGTATTCGGGCCTCTCTGGCAGCTGCTCCCAGCTCCGAGTGATCTTCTCCTTCTACGCCTCCACCATCGTGGCCTCTCTGGACGCCGTGGACAACGTGTCCGATGACATCATCGCCAAACTGCTGCCCTACGTCAACAAGGGTCTGAAGTCGGCGCTGACGGACTACAAAGCCGCCACCTACATGATCGTGTGCCAGCTGGCGGTGAAGGTGGTGATGGAGGCCAGTCTGGTCGACACTCTGGCCGCGCACGTGGCCAAGTCTCTGCTCCGAGAGCCCGTGTTGGCCAGGGAGGGCCTGGGCTGCCTCACCGTGCTGCTGCAGAACCAGAAGGACGGCGCCGCCGGGCCCAGGTACCAttacacacgctaa

Function

NR:

description
PREDICTED: HEAT repeat-containing protein 1-like

GO: NA

KEGG:

id description
K14550 UTP10, HEATR1; U3 small nucleolar RNA-associated protein 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800481.1 True 1102 mRNA 0.61 7 38343487 38352553

Neighbor

gene id symbol gene type direction distance location
LOC120559058 NA coding downstream 6581 38329266 ~ 38336906 (-)
LOC120559803 LOC102788279,LOC102300940,LOC107099231,LOC104961425 coding downstream 137396 38193260 ~ 38206091 (-)
fgd1 fgd1,LOC103367265 coding downstream 154695 38133222 ~ 38188792 (-)
tfe3a NA coding downstream 224859 38083822 ~ 38118628 (-)
LOC120559055 NA coding downstream 261271 38079881 ~ 38082216 (-)
pcsk1nl NA coding upstream 155939 38508492 ~ 38531063 (-)
LOC120558637 syp,LOC103367257,LOC102314167,LOC102203308 coding upstream 186120 38538673 ~ 38567635 (-)
LOC120558856 slc6a8,LOC100704248,LOC102310663 coding upstream 980709 39333262 ~ 39348187 (-)
gripap1 gripap1 coding upstream 1687432 40039985 ~ 40132853 (-)
LOC120558739 NA coding upstream 1899003 40251556 ~ 40254265 (-)
G56526 NA non-coding downstream 2417 38340299 ~ 38341070 (-)
G56522 NA non-coding downstream 8684 38334374 ~ 38334803 (-)
G56510 NA non-coding downstream 9510 38270467 ~ 38333977 (-)
G56509 NA non-coding downstream 15396 38327317 ~ 38328091 (-)
LOC120558304 NA non-coding downstream 20448 38315280 ~ 38323039 (-)
G56528 NA non-coding upstream 2778 38355331 ~ 38357648 (-)
G56541 LOC106536805,LOC103384381,LOC103130742 non-coding upstream 68428 38420981 ~ 38423782 (-)
G56534 NA non-coding upstream 85213 38437766 ~ 38439311 (-)
G56559 NA non-coding upstream 127732 38480285 ~ 38481708 (-)
G56563 NA non-coding upstream 151050 38503603 ~ 38504288 (-)
G56438 NA other downstream 173811 38073339 ~ 38169676 (-)
G56441 NA other downstream 176217 38140044 ~ 38167270 (-)
LOC120559229 NA other downstream 296818 38000002 ~ 38046669 (-)
G56436 NA other downstream 402939 37926194 ~ 37940548 (-)
LOC120559227 esd other downstream 443144 37882168 ~ 37900343 (-)
G56539 NA other upstream 52707 38405260 ~ 38406187 (-)
G56540 NA other upstream 66729 38419282 ~ 38513859 (-)
G56544 NA other upstream 76663 38429216 ~ 38500711 (-)
G56557 NA other upstream 125097 38477650 ~ 38479164 (-)
G56564 NA other upstream 178699 38531252 ~ 38531757 (-)

Expression


Co-expression Network