LOC120559070


Basic Information

Item Value
gene id LOC120559070
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 40536072 ~ 40566494 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800490.1
TTCTCAGCTTCGTGTGGCTGCAGTCAGACATGAGGACGCCTCGTCATGTTGGAACCataaaaacaaacgtcaaaaatagaaatgaATAAACTCTATTCAGTTCAGAATAAGCAAACATGTACACACGTCATGTTGGCCTATAAACTTGATAGGAAAATGATTTTTCCCGGGAACATCTTTGCATGAGAGAGCAGTAAGGAGGTTAATGAATAACGGAGAAAGTCAGTTCACCAGCTGCTCATCTGCAGTCAGACCCAGACGGAGAGGACCAGAGGAGAGACGAGGATGGAGAGACTTCTTctgaccatcatcatcatcgctgGGGCAGGGCTGAGTGCTGTCTCATCAGCTGCTGGACGTCAGTACTATTTTGTTTATGACAGGAAGAACTTTACTGAAGCCCAAAGATactgcagagagaaacacacagacctgGTCACTGTAGACAGCATGGAGGTTATGAAGATCCTGAACAACACGGCAGATTTAAGCAAAATGTTCTACTCCAAGAACAGCTCTAGAGCCTGGATAGGACTTCATGCTGACAGCTGGAGGTGGTCACTGTCAGACCCAAGTTTCTACAAACCCGGGGAGACGGAGTTCAGACGATGGGGGGTTGGAGAACCAAACGGTGGATACAGTTATAAAGTCTGCACAGGGATGGGTTCTGATGGATTCTGGTATGACTCCGGTTGTGACACCAGCACGTATCCAGTGTGCGCAGATGTCAGAGGGTCAGATGTGACTTTTGTCTCCATCGACACCCGTATGACATGGACTAAAGCCCAGAGCTACTGCAGAGCTCACCACACAGACCTGCCCAGTGTGAGAAACATGGCAGAGAACCAGAAGGTAAAGGAGGCGGCTGGAGGAAACAATGTCTGGATCGGCCTTTTCAGAGACTCCTGGAAGTGGTCAGATGGAAGTAACTCCTCATTCAGATCCTGGAAGGTCGGCCAACCTGATTACAACAACAGGAACGAGACTTGTGTGGCTGCAGActtcagccaatcaggagcCTGGGAGGAGTGGCCCTGTGACATGGAGAGAGCGTTCATTTGCTACGGTCCAGTGGTGTCAAACAAAGTGATGATGAAAGTGAAGTTTGAGAACAAGAAGAATCTGAATCTGACTGACCCTGCTGTGATGGAGGCCATGTTGAAGCAGCTGAAACAGAAGCTAGAGGGCCCGGGGCTGGACGACAACATCAAGCTGAGCTGGAGGAAGCAGGCCGATGGAAAAGTCTTCCAACAGGAAGACAAGAAGACcaacaagaggaggaggaagagggaggagctAAAGTCAGTTCACCAGCTGCTCATCTGCAGTCAGACCCAGACGGAGAGGACCAGAGGAGAGACGAGGATGGAGAGACTTCTTctgaccatcatcatcatcatcatcatcgctgGGGCAGGGCTGAGTGCTGTCTCATCAGCTGCTGGACTTCAGTACTACTTGTTTTACGACAGAAAGAACTTTACTGAAGCCCAAAGATACTGCAGAGAGAAGCACAAAGACCTGGTCACTGTAGACAGCATGGAGGTTATGAAGATCCTGAACAACACGGCAGATTTAGACATGTTCTACTCCAACAACAGCTACAGAGCCTGGACAGGACTGTATCATCTCCCCAACCCCTGGAGGTGGTCACTGTCGGACACAAGTTTCTACAAACCCGGGGAGACGGAGTTCAGACAATGGGCGTCTGGACAACCAGACGCTCGATACAGTGATAAAACCTGCACAGGGATGGGTCCTGATGGACTCTGGTTCAACGACGATTGTAACAGTAGGCCGTATACAGTCTGCGCAGATGTCAGAGGGTCAGATGTGACTTTTGTCCTCATCAAAACCTTTATGACATGGCCTGAAGCCCAGAGCTACTGCAGAGCTCACCACACAGACCTGCCCAGTGTGAGAAACATGGCAGAGAACCAGAAGGTACAGGCGGTGGTTGGACTAAACTTGGTCTGGATCGGCCTTTTCAGAGACTCCTGGAAGTGGTCAGATGGAAGTAACTCCTCATTCAGCTTCTGGAAGAACGGCCAACCTGATTACAACAACGGGAACGAGACTTGTGTGGCTGCAGActtcagccaatcaggagcCTGGGAGGAGTGGCCCTGTGACATGGAGAGAGCGTTCATTTGCTACGGTCCAGTGGTGTCAAACAAAGTGATGATGAAAGTGAAGTTTGAGAACAAGAAGAATCTGAATCTGACTGACCCTGCTGTGATGGAGGCCATGTTGAAGCAGCTGAAACAGAAGCTGAGGGCCCAGGGGCTGGACGACAACATCAAGCTGAGCTGGAGGAAGCAGGCCGATGGAAAAGTCTTCCACAAGGAAGACAAGAAGACcaacaagaggaggaggaagagggaggagctGTAATGTTGAGTTGCTGCGTCTGCTTTCATCAGAGAAAAGTCTGGTTCTTTGCAAGCAGAAATACTAAAAATATTCACAGCTTCTAGCTTCTCAAACATGAAGATTTGAtcatttttttgttatgtttggtgatAAACTTAATATATTTGAGCTTTAGACTGTTGTTAGAATAAATCAAGACTTTAGTATTTATCTGATTTGTCAGCTTTGGGGAAATATAACCAACATGTTTTACTGATAGTTAGCTACATTAGCATAGTCATGATTTTGGACATCAGAAGCATAAATACTAAatatattcacagcttctagCTTCTCAAAcatgaagattttctttttcatatttGATGATAAAGTTAATATACTTGGGCTTCAGACTTTAGTATTTATCTGATTTATCAGCTTTGGGGAAATATAACCGACATGTTTTACTGACTTTTGATTCAGGTTGTGGTGgagatgttttaacattaaaggaacacgccgacttattgggactttagcttattcaccgtaacccccagagtaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800490.1 True 2921 mRNA 0.47 12 40536072 40566494

Neighbor

gene id symbol gene type direction distance location
LOC120558739 NA coding downstream 281807 40251556 ~ 40254265 (-)
gripap1 gripap1 coding downstream 403219 40039985 ~ 40132853 (-)
LOC120558856 slc6a8,LOC100704248,LOC102310663 coding downstream 1187885 39333262 ~ 39348187 (-)
LOC120558637 syp,LOC103367257,LOC102314167,LOC102203308 coding downstream 1968437 38538673 ~ 38567635 (-)
pcsk1nl NA coding downstream 2005009 38508492 ~ 38531063 (-)
LOC120559367 NA coding upstream 14177 40580671 ~ 40594368 (-)
LOC120559370 NA coding upstream 32311 40598805 ~ 40602090 (-)
LOC120559368 NA coding upstream 71197 40637691 ~ 40647772 (-)
LOC120559573 myh7b,LOC100707717 coding upstream 210540 40777034 ~ 40836209 (-)
itpr3 itpr3 coding upstream 278714 40845208 ~ 41025474 (-)
G57032 NA non-coding downstream 76679 40386363 ~ 40459393 (-)
LOC120559770 NA non-coding downstream 101193 40433021 ~ 40434879 (-)
G57060 NA non-coding downstream 129859 40405948 ~ 40406213 (-)
G57054 NA non-coding downstream 135600 40340480 ~ 40400472 (-)
G57047 NA non-coding downstream 137856 40327980 ~ 40398216 (-)
G57110 NA non-coding upstream 151689 40718183 ~ 40794862 (-)
G57104 NA non-coding upstream 177470 40743964 ~ 40774662 (-)
G57114 NA non-coding upstream 186743 40753237 ~ 40771432 (-)
G57037 NA non-coding upstream 228165 40794659 ~ 40902820 (-)
G57121 NA non-coding upstream 236975 40803469 ~ 40803746 (-)
plxna3 plxna3,LOC101485239,LOC102288896 other downstream 907595 39466226 ~ 39628477 (-)
G56721 NA other downstream 921835 39550498 ~ 39614237 (-)
G56718 NA other downstream 1022792 39389524 ~ 39513280 (-)
G56599 NA other downstream 1293334 39237644 ~ 39242738 (-)
G56598 pim2,LOC105920369,LOC106942189,LOC106931484,LOC104956371 other downstream 1333646 39113695 ~ 39202426 (-)
LOC120559369 NA other upstream 94315 40660809 ~ 40669343 (-)
G57041 NA other upstream 267604 40834098 ~ 40903924 (-)
G57036 NA other upstream 311388 40877882 ~ 40884606 (-)
G57134 NA other upstream 445579 41012073 ~ 41110667 (-)
LOC120559188 arl8a,LOC100698319,LOC105027762,LOC103362481 other upstream 559841 41126335 ~ 41137726 (-)

Expression


Co-expression Network