LOC120559097


Basic Information

Item Value
gene id LOC120559097
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 26127317 ~ 26136177 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800528.1
TCACGCTGACAAAACGAGTTTCACCTCCCAGTGTTGTTGTCAGAGGAGGGATGTTGCACATGGTTTAGTTTTGACAGGGAGACTGGCTCGTGGGCTACTATACAGCTTTTCTGACATTGGACAGGAACAGGGCGGCCGACCCGACTTTACGTGATGGACACCAATTGTCTGCGTTTTCATGCTTTCTGCTGGTTAGAATGAAGCTGTGATGGGTTTGATGGAGCTGACTTGTGTTCAGATACCAAACAGACCTTTGTGCTTTTTAACAACACAATTTCTGCCACAACATGGCTGGGAGTCAGAATAACTCCTGGGGACAACATGTCCTGAACAGAGAGTGCTTTGGCCTGAGTGCTGACATGGAACAAAACCTGACGGAGCTTCAACAACAGCATGGAATGGCCAAGGAATTTAACTGCAACATCTCCCAGTCTCTTTTCTACTCTGATACTTACCGGCAAGCGTCTGACAGCATACTGCGGCCCCATGAGGGAGACCAGGTGGTCCCTTCTTCCCAGAGATGGACAGTGTTTGGGGGCCACCAGAGAGAAGCCAAACCCCTGCCGCCTCTGCCTGACCCTGAGGAGCTCATGTCTGATGAGGCAGCCGATAGTGAGGTGGAGTTTTTTACCACCGACAGACGCCGCCTTTTGCCCAAAAGCTGCCCTAAGGCCATGTGCAGGGGCATGAACAGAGACTGTGGCCAAGTGAATTACGCCTACCAGGAGAGCTCGTTGCAGGCTGGTGGTGCTGGGACTGGCTCCATGGCTTTCTCTTGGCcagggagagaggacagaccATCAGGGAGAGGAAGCAGGTTTTGGGCACTAGCTCTCCAGAGAGAAGACCACCAGCATGTGGTGTCAGCTGTCGGGGATACTGTGTGTAGCAAACAGCCAGACCAACACCAATCAGCCAGACTCCAGTTTCCCTGTTCAAGCCCTGCTTCCCAGCctctccacagcagcagcacaacCTGCCCCACTGACAAGCCCCTAATCCCTCCTCGTGTCCCCATCCTGCAAAAACGTCCCGCTCTCTTAAGGACTGTGAGCGCCAGCCAGGAAGACAAGCCTCCCAAAATTCCTCCAAGGATCCCTTTAGTCCCACCCTGCCCACCACGTACCCCGAGCCCCAAAAGCCTTCCAATTTATATCAATGGTGTGATGCCTGCCACACAGAGTTTCGCTGCTAACCCAAAATATGTGAGTAAGGCATTACAGAGACAGCAGTGTGAAAGGGTGCCACCTGCAGCTCAGTTTTCTCCCTGCATTGTTCCAATTTTGAAGGACGGCAGACAGGCCAGCGCCACGCACTACATCCTCCTGCCGCCGGGCCGACCAACGTACTCAGACAGACGAGAAAGACTCCTGAGTGAACCGGCCAGGACGGGAAACAGCAGCGGCTGGCAGAACAGATAGAAACCCTCGCTTATGTCCCTGTCTGAAACTTGATGAGTACAAAACTGTGACTGACATCATTAATAACAATATGATACACTATTGAACAAagtgtgtgaaaacatttacatGCTACACTCACATGTCTTATGTCACATTGGTGTTATTTTCAATGACTGATGCATTTCAAGACCACTTATGTCACACAACACTGTGAGGTTACTGTCTCCTTTTTAACTGAACATTTTACCGCTCAGTATTTTAGCATCATAACGTTCCAGTATTTTCACTTATAGTGgagaaatatttatataaccATTTTCAGTTTTGGTTTACTCAGATACTGCAGTTTTCTCACAGATATAATGTCTTATCACTCATTAATTCTGACAGCCATGTGCtcatagcctagaaatctagacgcaccctagcagcagcaaatttattttgcagccagggggcaacatcttgatgtgggtctggcttgtcaggctaatgtGCTCATATTACTAATATTATATTTCTTACGAGAGAGCAAATAATTACTGTATGTACAAGCTGGGCTTGTACCAAACTGTTCATCCCATGTGTTCTATGACAATGCTGCTTGAAATCTTAAGTATGATGTATTGATAGATTTAATGTTTTGCTGAATCATTCCCCCAATAAGAGTTATGGTAAATTTAACAATGAACAATGTGGCCAATATAAGAACGACACAACACAACCCAAACATGCTTTGAACTACAGTGAACCCGGATACTTCACCTGATAAAACACTTCTTATTTCCGTGCCTTATGCAGGCAAGTGCACTTCATTTTCATTACACAGCTTTCCCTATcacaaaaatgttttacagtgtTTCAGTGTATACACAggagtaaaagaaagccttaaTATTCAGTATTGGGCAGTTGATAAACTTTTAATCATTAtgatgaa
>XM_039800529.1
GACATGTATTATTAGTCTACGTGTGTCTCGGTGGTGGTGGAGTTTGTCATGCAGCATCACTGGAATGCTGCACAATTAGCCCCTGTTGTAAGGGCGGATACTGCAGGGTTTCATGGTcacagagagaaaggagggTGGGGAGTGCGGCTGCCCTCCCACATCTGACCCAGAGGTTGTGTAATAGCCTGCTCATCAGACAAATGGCTTTAAGCTGGAACCACAAAGAGATACACATGGCAGCTGCCAGAGCAGACTGAAGTAATTTACTGGGCTTTTGTTGTGACTGTTGTTTGAGGCTCACCAAAAACGATGCAGTTTCAGAAATCTTTCTGCTGGTTAGAATGAAGCTGTGATGGGTTTGATGGAGCTGACTTGTGTTCAGATACCAAACAGACCTTTGTGCTTTTTAACAACACAATTTCTGCCACAACATGGCTGGGAGTCAGAATAACTCCTGGGGACAACATGTCCTGAACAGAGAGTGCTTTGGCCTGAGTGCTGACATGGAACAAAACCTGACGGAGCTTCAACAACAGCATGGAATGGCCAAGGAATTTAACTGCAACATCTCCCAGTCTCTTTTCTACTCTGATACTTACCGGCAAGCGTCTGACAGCATACTGCGGCCCCATGAGGGAGACCAGGTGGTCCCTTCTTCCCAGAGATGGACAGTGTTTGGGGGCCACCAGAGAGAAGCCAAACCCCTGCCGCCTCTGCCTGACCCTGAGGAGCTCATGTCTGATGAGGCAGCCGATAGTGAGGTGGAGTTTTTTACCACCGACAGACGCCGCCTTTTGCCCAAAAGCTGCCCTAAGGCCATGTGCAGGGGCATGAACAGAGACTGTGGCCAAGTGAATTACGCCTACCAGGAGAGCTCGTTGCAGGCTGGTGGTGCTGGGACTGGCTCCATGGCTTTCTCTTGGCcagggagagaggacagaccATCAGGGAGAGGAAGCAGGTTTTGGGCACTAGCTCTCCAGAGAGAAGACCACCAGCATGTGGTGTCAGCTGTCGGGGATACTGTGTGTAGCAAACAGCCAGACCAACACCAATCAGCCAGACTCCAGTTTCCCTGTTCAAGCCCTGCTTCCCAGCctctccacagcagcagcacaacCTGCCCCACTGACAAGCCCCTAATCCCTCCTCGTGTCCCCATCCTGCAAAAACGTCCCGCTCTCTTAAGGACTGTGAGCGCCAGCCAGGAAGACAAGCCTCCCAAAATTCCTCCAAGGATCCCTTTAGTCCCACCCTGCCCACCACGTACCCCGAGCCCCAAAAGCCTTCCAATTTATATCAATGGTGTGATGCCTGCCACACAGAGTTTCGCTGCTAACCCAAAATATGTGAGTAAGGCATTACAGAGACAGCAGTGTGAAAGGGTGCCACCTGCAGCTCAGTTTTCTCCCTGCATTGTTCCAATTTTGAAGGACGGCAGACAGGCCAGCGCCACGCACTACATCCTCCTGCCGCCGGGCCGACCAACGTACTCAGACAGACGAGAAAGACTCCTGAGTGAACCGGCCAGGACGGGAAACAGCAGCGGCTGGCAGAACAGATAGAAACCCTCGCTTATGTCCCTGTCTGAAACTTGATGAGTACAAAACTGTGACTGACATCATTAATAACAATATGATACACTATTGAACAAagtgtgtgaaaacatttacatGCTACACTCACATGTCTTATGTCACATTGGTGTTATTTTCAATGACTGATGCATTTCAAGACCACTTATGTCACACAACACTGTGAGGTTACTGTCTCCTTTTTAACTGAACATTTTACCGCTCAGTATTTTAGCATCATAACGTTCCAGTATTTTCACTTATAGTGgagaaatatttatataaccATTTTCAGTTTTGGTTTACTCAGATACTGCAGTTTTCTCACAGATATAATGTCTTATCACTCATTAATTCTGACAGCCATGTGCtcatagcctagaaatctagacgcaccctagcagcagcaaatttattttgcagccagggggcaacatcttgatgtgggtctggcttgtcaggctaatgtGCTCATATTACTAATATTATATTTCTTACGAGAGAGCAAATAATTACTGTATGTACAAGCTGGGCTTGTACCAAACTGTTCATCCCATGTGTTCTATGACAATGCTGCTTGAAATCTTAAGTATGATGTATTGATAGATTTAATGTTTTGCTGAATCATTCCCCCAATAAGAGTTATGGTAAATTTAACAATGAACAATGTGGCCAATATAAGAACGACACAACACAACCCAAACATGCTTTGAACTACAGTGAACCCGGATACTTCACCTGATAAAACACTTCTTATTTCCGTGCCTTATGCAGGCAAGTGCACTTCATTTTCATTACACAGCTTTCCCTATcacaaaaatgttttacagtgtTTCAGTGTATACACAggagtaaaagaaagccttaaTATTCAGTATTGGGCAGTTGATAAACTTTTAATCATTAtgatgaa
>XM_039800530.1
TCACGCTGACAAAACGAGTTTCACCTCCCAGTGTTGTTGTCAGAGGAGGGATGTTGCACATGGTTTAGTTTTGACAGGGAGACTGGCTCGTGGGCTACTATACAGCTTTTCTGACATTGGACAGGAACAGGGCGGCCGACCCGACTTTACGTGATGGACACCAATTGTCTGCGTTTTCATGAGAGTGCTTTGGCCTGAGTGCTGACATGGAACAAAACCTGACGGAGCTTCAACAACAGCATGGAATGGCCAAGGAATTTAACTGCAACATCTCCCAGTCTCTTTTCTACTCTGATACTTACCGGCAAGCGTCTGACAGCATACTGCGGCCCCATGAGGGAGACCAGGTGGTCCCTTCTTCCCAGAGATGGACAGTGTTTGGGGGCCACCAGAGAGAAGCCAAACCCCTGCCGCCTCTGCCTGACCCTGAGGAGCTCATGTCTGATGAGGCAGCCGATAGTGAGGTGGAGTTTTTTACCACCGACAGACGCCGCCTTTTGCCCAAAAGCTGCCCTAAGGCCATGTGCAGGGGCATGAACAGAGACTGTGGCCAAGTGAATTACGCCTACCAGGAGAGCTCGTTGCAGGCTGGTGGTGCTGGGACTGGCTCCATGGCTTTCTCTTGGCcagggagagaggacagaccATCAGGGAGAGGAAGCAGGTTTTGGGCACTAGCTCTCCAGAGAGAAGACCACCAGCATGTGGTGTCAGCTGTCGGGGATACTGTGTGTAGCAAACAGCCAGACCAACACCAATCAGCCAGACTCCAGTTTCCCTGTTCAAGCCCTGCTTCCCAGCctctccacagcagcagcacaacCTGCCCCACTGACAAGCCCCTAATCCCTCCTCGTGTCCCCATCCTGCAAAAACGTCCCGCTCTCTTAAGGACTGTGAGCGCCAGCCAGGAAGACAAGCCTCCCAAAATTCCTCCAAGGATCCCTTTAGTCCCACCCTGCCCACCACGTACCCCGAGCCCCAAAAGCCTTCCAATTTATATCAATGGTGTGATGCCTGCCACACAGAGTTTCGCTGCTAACCCAAAATATGTGAGTAAGGCATTACAGAGACAGCAGTGTGAAAGGGTGCCACCTGCAGCTCAGTTTTCTCCCTGCATTGTTCCAATTTTGAAGGACGGCAGACAGGCCAGCGCCACGCACTACATCCTCCTGCCGCCGGGCCGACCAACGTACTCAGACAGACGAGAAAGACTCCTGAGTGAACCGGCCAGGACGGGAAACAGCAGCGGCTGGCAGAACAGATAGAAACCCTCGCTTATGTCCCTGTCTGAAACTTGATGAGTACAAAACTGTGACTGACATCATTAATAACAATATGATACACTATTGAACAAagtgtgtgaaaacatttacatGCTACACTCACATGTCTTATGTCACATTGGTGTTATTTTCAATGACTGATGCATTTCAAGACCACTTATGTCACACAACACTGTGAGGTTACTGTCTCCTTTTTAACTGAACATTTTACCGCTCAGTATTTTAGCATCATAACGTTCCAGTATTTTCACTTATAGTGgagaaatatttatataaccATTTTCAGTTTTGGTTTACTCAGATACTGCAGTTTTCTCACAGATATAATGTCTTATCACTCATTAATTCTGACAGCCATGTGCtcatagcctagaaatctagacgcaccctagcagcagcaaatttattttgcagccagggggcaacatcttgatgtgggtctggcttgtcaggctaatgtGCTCATATTACTAATATTATATTTCTTACGAGAGAGCAAATAATTACTGTATGTACAAGCTGGGCTTGTACCAAACTGTTCATCCCATGTGTTCTATGACAATGCTGCTTGAAATCTTAAGTATGATGTATTGATAGATTTAATGTTTTGCTGAATCATTCCCCCAATAAGAGTTATGGTAAATTTAACAATGAACAATGTGGCCAATATAAGAACGACACAACACAACCCAAACATGCTTTGAACTACAGTGAACCCGGATACTTCACCTGATAAAACACTTCTTATTTCCGTGCCTTATGCAGGCAAGTGCACTTCATTTTCATTACACAGCTTTCCCTATcacaaaaatgttttacagtgtTTCAGTGTATACACAggagtaaaagaaagccttaaTATTCAGTATTGGGCAGTTGATAAACTTTTAATCATTAtgatgaa

Function

GO: NA

KEGG:

id description
ko00380 Tryptophan metabolism
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800528.1 False 2343 mRNA 0.47 4 26127317 26136177
XM_039800529.1 True 2487 mRNA 0.47 4 26131454 26136177
XM_039800530.1 False 2190 mRNA 0.47 3 26127317 26136177

Neighbor

gene id symbol gene type direction distance location
zgc:154075 LOC104945171,LOC101464044,LOC102304528,LOC100692795,LOC102780086,LOC103362596 coding upstream 17973 26102648 ~ 26109344 (+)
si:dkeyp-100a1.6 NA coding upstream 40945 26084664 ~ 26086372 (+)
arhgef16 arhgef16 coding upstream 56119 26051537 ~ 26071198 (+)
espn espn coding upstream 76831 26001292 ~ 26050486 (+)
her3 NA coding upstream 259339 25866763 ~ 25867978 (+)
ubr4 NA coding downstream 13173 26149350 ~ 26212156 (+)
LOC120558413 LOC103372574 coding downstream 80337 26216514 ~ 26218082 (+)
her12 LOC101486328 coding downstream 86318 26222495 ~ 26223843 (+)
rprd1b rprd1b coding downstream 100662 26236839 ~ 26247282 (+)
LOC120559565 NA coding downstream 111820 26247997 ~ 26259954 (+)
G53109 NA non-coding upstream 27682 26096359 ~ 26099635 (+)
LOC120559215 NA non-coding upstream 130223 25995233 ~ 25997094 (+)
G53056 NA non-coding upstream 316270 25809713 ~ 25811047 (+)
LOC120558677 NA non-coding upstream 1111919 25009989 ~ 25015398 (+)
G52892 NA non-coding upstream 1167214 24959816 ~ 24960103 (+)
G53221 NA non-coding downstream 189044 26325221 ~ 26325468 (+)
G53222 NA non-coding downstream 189742 26325919 ~ 26329616 (+)
G53223 LOC103362778,LOC108236819,LOC101165391 non-coding downstream 193907 26330084 ~ 26330628 (+)
G53239 NA non-coding downstream 228265 26364442 ~ 26364837 (+)
G53248 LOC101164642,LOC104966947,LOC100690915,LOC102195969,LOC104926428,LOC101062277 non-coding downstream 261022 26397199 ~ 26402428 (+)
G53096 ybx1 other upstream 50653 26071585 ~ 26076664 (+)
tprg1l tprg1l,LOC102784883,LOC106513028 other upstream 378996 25743589 ~ 25748321 (+)
G52871 LOC104956590 other upstream 1169987 24953442 ~ 24957330 (+)
LOC120559118 LOC102791662 other upstream 1181997 24940795 ~ 24945320 (+)
ctnnbip1 ctnnbip1 other upstream 2312911 23791447 ~ 23814406 (+)
G53232 LOC104966952,LOC103362776,LOC102800046,LOC102208894 other downstream 216283 26352460 ~ 26353463 (+)
LOC120559113 LOC108236696,LOC104966950,LOC103362773,LOC103384494 other downstream 242015 26378192 ~ 26383047 (+)
atp5f1e NA other downstream 306873 26443050 ~ 26444890 (+)
LOC120559571 vapb,LOC100711919,LOC102796136,LOC101481364 other downstream 347355 26483532 ~ 26537351 (+)
gnas gnas,LOC102796627,LOC104936173 other downstream 354265 26490442 ~ 26523888 (+)

Expression


Co-expression Network