LOC120559132 (LOC102197101,LOC101463906,LOC102310392,LOC100702039)


Basic Information

Item Value
gene id LOC120559132
gene name LOC102197101,LOC101463906,LOC102310392,LOC100702039
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 29593048 ~ 29609420 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800615.1
GTGAAGAGGTGCAATATCGGTCGCAGCTGTATTTTTATATCTAAACGTGGTTAACTTTGGATGACAATAGAACCGTTGTTTAGTTGTCATAGTGAAGCGTCAGTAGGTTCCCAGTTTGAGTTCAgagtctaaaaaaaacaaactgaggaAGCTGCTCAGTTCTCTGCAGACAGCCAActgacaggaaggaaggaacaaCTACCACGCTGCAACTCGACAAACACTTCTTGCCACTTTTATCTTCAATTCCTCTTCAAAAAGCTTCAACACCTTTCGTTCTCGTGGCTTTATGGAAATATAAACTACATGCTGGCAGAAAGGGGGAACTAGAGCTTAACAGCACCACCCCCCTCCTCGTCTCCAACTCACAATATCCTCTTTTGGACCCAACCAGCCCCTGTTTTTATGTTATCTCTTTGGTTTTAGTgtggcacgcacacacacacacgcacacacaaacccagTGGGGATGATTGTCTGGGCAGATGGTACTCAGTGTGTGGACTAGAAGctgagacaggcagagagagacagactccTCGTCCGTCATGGGATGCTGCAGTGTGACCCAGAGGCATACTGGAGTGGACGAGGTGGGCCCTGATGAGATCGAGCTCCTGGAACTCTCTGGAGACAATTTAGGGGTGTGGAGTCTGGGAGAGACCAGGCTTCAGCTGTCAGTGAGGAACAGCAGAGATGAGCAGCAGCCACCGCCACCGCGCTACCCTTCAGTACGACACCTGAAACAAGAggtgGTGCTGTGGGGCAGGAGCAGAGACGAGTTGCACCACAGGATTTACTCCCACCAGCCAATCAGGGAGTGGGAGGGCCAACCTGCCCACATGTATGGAGAGATCATCCACTCCTCCCTGGTGTCTCTCTATAACAgctacacacagGAAACCAGTGAACACTTccttgtgttgttttctttccACCTGCTGATCCTCTCTCTGGACCACTCACGACAAGACTTTATTTATGAGGGCATCCTTCCCCTTTCTGGACTTTCCTTGCAAGTCGTCTCCTTGGACCCTGACACGTCACATTCACCACACATGTTTGAGATCAGCAGTCCAATGGTGGACTCCAAGATCTTCATATGTTCCAGTGCTGGAGAGTTACAGAAGTGGATGCAAGACATAGAAGACAGGAGATACAAGTCACTGGCAAAGCCCATTAGTCCCTCCCACTGCGCGCTCTCCTATCTTTTACCCTGTGATGAGCACTGGAAAAGAGAAGAACTGAAAAAGTACTTGATGCAAGCTCCCATATGGCAGTGGGAGGGCTCGCCTATACAGCATATGGGTCAGCCGGGATACATATCTATCGTCCATGTcatcaacacacagagacagGGACTCCAAGAAAGACTGATAGTTCTCTTTCCTCAAGACCTCCTGCTACTGTCAGTAGACAACAAGCGTCTGAATATAAGATATGAGGGCAGGTTGCCCCGACACAGCATCAAAGCAGTGGAGAGGTCAGCCCTGCCTGGGCGGCTGGAGTTAGAGCTGATAGgGGAGCTGGTGGAACCCCTGCGAGTCTCCTGTACCTGTCTGGAGGATTATCGGAACCTGATGTTTCAATTACAACAGCCAGACAGAAACAGCCACGTTACTGTGAGTCACGCTGCACCTCCAATCATGCCAAAGCTGCAGAGGAGCAGGAAGGAGTCCCAGGATCCCATAATAACAGCCGACCAATGTCACATCAATGGACGCAGCTGACTCATCCAAATGGGGAAAAGCTTGACTGTAAttataaatatgaaataatgtgtaGATAGTATGTACATACTACTTTTATGTCTAATTGTGCCACAAAATGAAGATACAGCAGTAAGGAGGTTCTGAAATATTCTCACcacattttgatttatttgagTGATTTGACCCTCTGAGGAACTAAAAAGATACTTATAGTTTCCTTTCATGTGCGGACAAACAGAAATAGAGTCATGACCCGGTTTAAGGCCAGAACCCAGATGAAGAAATGTTAGATGTAGCGATTGTAgagatgtttgactttttccacaataaactgttaaaaatTCCACACAACATAAAA

Function

NR:

description
PREDICTED: uncharacterized protein LOC102197101

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800615.1 True 2070 mRNA 0.47 11 29593048 29609420

Neighbor

gene id symbol gene type direction distance location
LOC120559893 LOC104921444,LOC103367276,LOC104966657,LOC106952640,LOC103151253,LOC106934176 coding downstream 255450 29323865 ~ 29337598 (-)
gabrd gabrd,LOC102778860 coding downstream 412357 29158029 ~ 29180691 (-)
LOC120559029 LOC102787320,LOC102195592,LOC100705795,LOC102314501 coding downstream 438823 29150403 ~ 29154225 (-)
dffb dffb coding downstream 1075086 28510901 ~ 28517962 (-)
b3gnt7l LOC103356136,LOC104946517,LOC101486029 coding downstream 1090143 28500573 ~ 28502905 (-)
ttll10 NA coding upstream 489 29609909 ~ 29650365 (-)
mib2 mib2 coding upstream 73369 29682789 ~ 29731910 (-)
ubiad1 ubiad1 coding upstream 125521 29734941 ~ 29739193 (-)
atp13a2 NA coding upstream 173986 29783406 ~ 29804982 (-)
LOC120559846 sdhb,LOC101478036,LOC102293590,LOC100705239,LOC102211954 coding upstream 197374 29806794 ~ 29810573 (-)
G54038 ddost,LOC107687429 non-coding downstream 69586 29521790 ~ 29523462 (-)
G54006 NA non-coding downstream 203485 29388551 ~ 29389563 (-)
G54005 spen non-coding downstream 207196 29385123 ~ 29385852 (-)
G54001 spen,LOC102775881 non-coding downstream 212722 29377948 ~ 29380326 (-)
G54000 NA non-coding downstream 217626 29375019 ~ 29375422 (-)
LOC120559594 NA non-coding upstream 66951 29676371 ~ 29678804 (-)
G54185 atad3a,LOC103366266,LOC105898932 non-coding upstream 204930 29814350 ~ 29815450 (-)
G54189 NA non-coding upstream 213100 29822520 ~ 29822817 (-)
G54272 NA non-coding upstream 291140 29900560 ~ 29902720 (-)
LOC120559738 NA non-coding upstream 886620 30496040 ~ 30500331 (-)
clcnk clcnka,LOC104952128,LOC102786725 other downstream 100073 29474503 ~ 29492975 (-)
LOC120559896 slc25a45 other downstream 237164 29350078 ~ 29355884 (-)
ajap1 ajap1 other downstream 563727 28971286 ~ 29029321 (-)
LOC120559779 LOC104918355,LOC103374204,LOC103385013 other downstream 1406521 28153182 ~ 28186527 (-)
LOC120558759 NA other downstream 1662533 27845264 ~ 27930515 (-)
cdk11b LOC103366252,LOC101466870,LOC100697195 other upstream 143241 29752661 ~ 29765873 (-)
tafa5l LOC102786421,LOC104919510,LOC100700110,LOC103384901,LOC106518908,LOC107086703 other upstream 361776 29971196 ~ 30072699 (-)
LOC120558955 LOC104919264,LOC102777709,LOC100695043,LOC102209489,LOC103373809,LOC103152775,LOC101470785,LOC106963186 other upstream 2683522 32292942 ~ 32323275 (-)
LOC120559593 plxnb1,LOC103373813,LOC107100289 other upstream 2981563 32590983 ~ 32666459 (-)
G54756 LOC107088573,LOC106566972 other upstream 3157937 32767357 ~ 32773486 (-)

Expression


Co-expression Network