las1l (las1l,LOC103461358)


Basic Information

Item Value
gene id las1l
gene name las1l,LOC103461358
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 35266701 ~ 35269429 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800657.1
ggacgTCAACGTCATTTCCGGGATGCGATACCATCGGTAGAGGGTTTTTGGGTGGCTCCAAACGCTGCGACATAAAGCTATTTTAGTTCCAGTTTGAATTGAGTGCGTGTCAGAAGAGAGAGAGTAATTTATCGGCGTTTTATTTAACAGCGTTATGTGTACACGGTGTTAACGTCGAGTCGACCGTACGCCTCTTGCGCCgttaaaatgaagaaaaagagCTCCGAGAAAAAACGCCATGTGGTGGCGTGGGCCAACAAAGCTGAGTGGGACCAAGTTCTGGAGTATCTTTACTCGAAGGACTCGGCCTTACAGAGGTACGCGCTGCAGAGGATATCGGCTTGGAGAGGCAGGTACGCCAACAGCACTCCTGTGGCAGTGGACTGCACAGCGGACCTGGTGAGGTGCCAGGTGCTGGACCGGTCCGGGCAGCTGGACGGAGATGATCTGGTCTTGCTTTATGGAGCAGGGCTGGTGAGGTTCGTCAATCTGATCACCGAGCGGCAACAGGGCAGAACAGCCCGCCCACTGAGGCGGCTGGCTGGGAAGTTAAACATCCCAGAGTGGGTCGTGGACCTGAGGCACGATTTCACACACAGGAAGCTTCCTACCTTAAAATGGTGTCGAAAGGGATGCAAGGTGGTCCTAGAGTGGCTCCAGCAGGAGTACTGGTCCAGGCAGTTGGGAGGTGGGCCTAATGAGGACTGGGAATCCGAGTCGGATGGAGAGGACGAAGAGAGTGACCTAAAACGCCAAGGGGACGAGCTCCTTGCCAGGCAAAAAGAAATGGAGGCCTACAAGAATGCACGGGAACTCCTGATATCTTTTGAGAAGGAGCAGTACCAGGCTTTTGATGGGATTCCTGAAGACAAAGAGAAGAACTTGTGGCCAGCCCCCTTTGCAGACATGAGCTGGCTACTAGGGGAGATCAAGCAGTTCGCTCTGCAGTCCAGTAATCTGCTGGTTGATGTGTTGCTGGAGGATGGATTTCTAGTTCCTACCGTTGAACAACTGGAAACGTTAGGCTGCGATACTTCTGACAACGCCAGTCCCACCGAACCCAGACTCGCTCAAACCTTCCTGCGTTTCTGGCTTCCCCTGCTGAAGATGCTCAACTCGCCTGCCTTTATCCATCTCCTTCTGGAGAAGCTGTTTGGTGAACTGAAAGTGCTCGCCAAAGAGCAGAATAATCACAGGGCTTTCTACCTTTCTGGTTGGATCGCAGAGCTCATCCTCTGTAACGGCAACAAATTTGAATACCATTTTGAAACAAAGGGACAGAAGAAGGCCAGGATGAAGGACAGGATCTTTGTGAACCGCATCCAGCTGAGGTGGCAGCAGCTTCTCTCGGCATGCCTGGATGCTCCCTGTATCAGCACGCCTCACTTGCTCCAGTTAATCCTGGATGACATGGAGCATCCTCTCCCTCTGGAAACCCGACAGAGGCTGTTCCAGCTCTGCTCCATCTACACACAGTCTTCACATTCAGAATGTGATACTTCACCGGCGCAGAAACAGCAGCCCATATACACGCTGGAGAGTTTGCATGAGAAGCTGCAGCATTCACGGCGCCGTCCCACGGCTGTAGCGGAGAGGAGCGAGTCCTCCCAGGAGTACAGTTGGGCAGATGCTCACGCCGAAAAAGCCAGATTGCTTCGAGGTTCTCCGTGGCAGCTGTGCAGCGATAAGGTTTTGTGGAAGAACTACCCTCTTGGTAAAGTCCCCGGTCAGTCCGATGACCCTTCGTGTCTCATGGTGGAGAACTACTCAACAATGACTGTCTTTGACCAGCCGGTGGAGTTGGAGAGTAACGCAACACACAATGTCCCAGGAGCACCAGTGAGAACAGCTGATGGCCTTCTTTGGAACCACAGCGATGTTAATAAGCTTAAATCTGGACTGCAACTTTTTTGAGTTGTGAAATATAGTCCTTTAGCCTCTGGCACATTGTTGAACTCattgaaaaacagaaacaaaatatgtaAACTTCAATTCTTAACAGTTTGTTGCAGGATATAACAAATGTGTCAAGCAGCTTACATTTATCAGGCAAGAATGCCAAACATAACTGGTTCCAGCATCtttaatgtgaggatttgctgattTTTCCGTTTCATATAATTTAGGATAGCAACTAatacttattttttattacaaattattttctcgattcatAAAAGGTCAGTAACTACTGAAAAATGCCCATTATAATTTCCCAGAGCGCAAGgtgacctttaaaaaaaaattaataataattcacaagtttctgacattttgcagacaaaacaattcataaattaatttgaaaaaaGAATCAGAAGAATTATTGATATAGAAaacaattgttagttgcagccctaatgtaaAGCATTTATTTGTAAAACCCTTCATGTTGTATGCTGTCTACAATATTTCCaattggtggaacatgtgctgAGATTTAACACATCCTATGAAACCTCATATACTGCACATGACAAGGGAAAAATTGGATAGAATTTGGATATGGTTGATTCATTATGATGGtgtacatttttcatttctttcaccTGTTATGCAAGTGAACTTGCACCGTTATTACTGTCGTCAGGTCCCTACAAAGTGTATTGGAGTAGGTGCCTTTCAGTTGAAAACCTTTGCAGAGAGGATATTGTTGTAAGCACAAGGTGGTTTTGAGTTACACATTTGCTTTTGCGCACTTATgttcaataaaacatttttctactgaA

Function

symbol description
las1l Predicted to enable endonuclease activity. Predicted to be involved in maturation of 5.8S rRNA and maturation of LSU-rRNA. Predicted to act upstream of or within rRNA processing. Predicted to be part of preribosome, large subunit precursor. Human ortholog(s) of this gene implicated in Wilson-Turner syndrome. Orthologous to human LAS1L (LAS1 like ribosome biogenesis factor).

NR:

description
ribosomal biogenesis protein LAS1L isoform X1

GO: NA

KEGG:

id description
K16912 LAS1; ribosomal biogenesis protein LAS1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800657.1 True 2729 mRNA 0.47 1 35266701 35269429

Neighbor

gene id symbol gene type direction distance location
crebzf crebzf coding downstream 628 35262964 ~ 35266073 (-)
cfap126 NA coding downstream 100444 35164743 ~ 35166257 (-)
tmed4 LOC104954229,LOC100701503,LOC102209141,LOC106566412,LOC102295556 coding downstream 180254 35078799 ~ 35086447 (-)
myt1b NA coding downstream 231749 34906437 ~ 35034952 (-)
LOC120559153 LOC102294427,LOC103371493,LOC108250036,LOC102794968,LOC101487634 coding downstream 367483 34887785 ~ 34899218 (-)
mrpl49 NA coding upstream 16931 35286360 ~ 35287210 (-)
emd NA coding upstream 29067 35298496 ~ 35304015 (-)
flna LOC100702302 coding upstream 41765 35311194 ~ 35384229 (-)
LOC120559648 LOC103362257,LOC106633114,LOC101486280 coding upstream 983747 36253176 ~ 36270025 (-)
plch2a plch2,LOC106935153 coding upstream 1003442 36272871 ~ 36447792 (-)
G55409 NA non-coding downstream 20154 35245657 ~ 35246547 (-)
G55400 atp2b3,LOC103376147 non-coding downstream 50082 35214088 ~ 35216619 (-)
G55396 NA non-coding downstream 89644 35176798 ~ 35177057 (-)
G55376 NA non-coding downstream 116078 35110380 ~ 35150623 (-)
G55368 NA non-coding downstream 166444 35098749 ~ 35100257 (-)
G55496 NA non-coding upstream 145578 35415007 ~ 35417799 (-)
LOC120559180 NA non-coding upstream 162954 35432383 ~ 35448470 (-)
G55511 NA non-coding upstream 216303 35485732 ~ 35634395 (-)
G55505 NA non-coding upstream 221674 35491103 ~ 35709461 (-)
G55514 NA non-coding upstream 225121 35494550 ~ 35503023 (-)
ntsr1 ntsr1,LOC103361890,LOC104959625 other downstream 975632 34236566 ~ 34291069 (-)
G55124 fam110a,LOC104960682 other downstream 1139206 34024018 ~ 34127495 (-)
G55131 NA other downstream 1173583 34087970 ~ 34093118 (-)
lamb2 NA other downstream 1651761 33555800 ~ 33614940 (-)
zgc:158296 NA other downstream 2295538 32966635 ~ 32971163 (-)
LOC120559165 NA other upstream 467 35269896 ~ 35277854 (-)
G55492 NA other upstream 135175 35404604 ~ 35409766 (-)
si:ch73-70k4.1 NA other upstream 605193 35874622 ~ 35898736 (-)
LOC120559361 NA other upstream 1288101 36557530 ~ 36559959 (-)
G56160 NA other upstream 1412470 36681899 ~ 36724209 (-)

Expression


Co-expression Network