cfap126


Basic Information

Item Value
gene id cfap126
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 35164743 ~ 35166257 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800709.1
TTTTCCTGTCTAGCCGTTCCTCAACGGAAAGGAGTAAAGGAGAAGTCAGTTTGATGCGTTGCTATGCAACGAGTCAACAAAAACAGACGCGGACCTGTAGTGTAGACGGAGGCAGAAATGTTCAGTTACTCGGCAAACCAGTATGACAGTGCATTCAAGCCGCGTCGACTGCAGAACTGGTGCGAGACTAACGTTAAGCACTTTAAAGAGagaccCACTGCACATGAGGGCCACACCACCTTTATTGCCGATGAAAGAGGACATCTGCTCCCAGGAGTGGTGAAGAAGGGCAGTGCATGGACAGACTTTAAGGGGACCTGGGATCTACCTGCTCGTATCCCAGCCCACCGCATAAACCCTACAGGCCGCTCTGTGGATGGTCTCAACATGCTGAAGTCGTGGGGCATTGACCCACAGCACACTGGCAAATCTCAGCCACACAGAGGCAGCAAAGACACAGATAGGCTGCAGGATGTTGGCCAGCAGAACAATGAGGATGTACAGCAGGACAGTGCTGCCCTTTGTCCTGCAGCTGGGCCAGTACTCGACAGCAGGCCCGACACTGGCAAGGTGAGACCAGCCAGCAATGTATCAGCAGAAGCAGCCAGCCAAGAAGGGCCGACCTCCTCTGAGCATGGGCACAAAGATGAACAGCAAGAGCAGTGAACTTCTTCATTTCATTTGTggtggatgaaaaaaaaaaaaaatacccacaAAATTAAATGCCTGTCAACTGTC

Function

NR:

description
LOW QUALITY PROTEIN: protein Flattop-like

GO:

id name namespace
GO:0022412 cellular process involved in reproduction in multicellular organism biological_process
GO:0019538 protein metabolic process biological_process
GO:0007281 germ cell development biological_process
GO:0006508 proteolysis biological_process
GO:0003006 developmental process involved in reproduction biological_process

KEGG:

id description
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption
ko05164 Influenza A

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800709.1 True 738 mRNA 0.51 5 35164743 35166257

Neighbor

gene id symbol gene type direction distance location
tmed4 LOC104954229,LOC100701503,LOC102209141,LOC106566412,LOC102295556 coding downstream 78296 35078799 ~ 35086447 (-)
myt1b NA coding downstream 129791 34906437 ~ 35034952 (-)
LOC120559153 LOC102294427,LOC103371493,LOC108250036,LOC102794968,LOC101487634 coding downstream 265525 34887785 ~ 34899218 (-)
plagl2 plagl2 coding downstream 322457 34790613 ~ 34842286 (-)
slco4a1 slco4a1,LOC101478628,LOC102208188,LOC102077347,LOC102776629 coding downstream 789240 34333598 ~ 34375503 (-)
crebzf crebzf coding upstream 96707 35262964 ~ 35266073 (-)
las1l las1l,LOC103461358 coding upstream 100444 35266701 ~ 35269429 (-)
mrpl49 NA coding upstream 120103 35286360 ~ 35287210 (-)
emd NA coding upstream 132239 35298496 ~ 35304015 (-)
flna LOC100702302 coding upstream 144937 35311194 ~ 35384229 (-)
G55376 NA non-coding downstream 14120 35110380 ~ 35150623 (-)
G55368 NA non-coding downstream 64486 35098749 ~ 35100257 (-)
G55360 NA non-coding downstream 79545 35069015 ~ 35085198 (-)
G55346 snrpg,prosc non-coding downstream 87678 35062794 ~ 35077065 (-)
G55343 NA non-coding downstream 279153 34884408 ~ 34885590 (-)
G55396 NA non-coding upstream 10541 35176798 ~ 35177057 (-)
G55400 atp2b3,LOC103376147 non-coding upstream 47831 35214088 ~ 35216619 (-)
G55409 NA non-coding upstream 79400 35245657 ~ 35246547 (-)
G55496 NA non-coding upstream 248750 35415007 ~ 35417799 (-)
LOC120559180 NA non-coding upstream 266126 35432383 ~ 35448470 (-)
ntsr1 ntsr1,LOC103361890,LOC104959625 other downstream 873674 34236566 ~ 34291069 (-)
G55124 fam110a,LOC104960682 other downstream 1037248 34024018 ~ 34127495 (-)
G55131 NA other downstream 1071625 34087970 ~ 34093118 (-)
lamb2 NA other downstream 1549803 33555800 ~ 33614940 (-)
zgc:158296 NA other downstream 2193580 32966635 ~ 32971163 (-)
LOC120559165 NA other upstream 103639 35269896 ~ 35277854 (-)
G55492 NA other upstream 238347 35404604 ~ 35409766 (-)
si:ch73-70k4.1 NA other upstream 708365 35874622 ~ 35898736 (-)
LOC120559361 NA other upstream 1391273 36557530 ~ 36559959 (-)
G56160 NA other upstream 1515642 36681899 ~ 36724209 (-)

Expression


Co-expression Network