emd


Basic Information

Item Value
gene id emd
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 35298496 ~ 35304015 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800713.1
CCCtgtatttgtgaatacaaatatctgAAGATCTAAAACTGTGTATGTTGCgtatcattgcacatttttaagcgGGTGTATGTATGGAAACCCTGGAGATAGATCACACCACTGCCATGGATGTAGAAGCCTGCCAGCAGAACACTACTTGAGTAGGCGTGTAGCATGGCTCGTAGTATCCGTAGGTGTGCCGAGAGCGTCGTCCGGATATGGGCGCCAGTTCCACCCACTTCGCTGCTCTAGCCTGCTCCTCGTCCTGGCTCTCAGCAACCCCGGACTGGTCTGTCTTTTCCAAGGATGGCTTTGAGTGAGAAAAGTAATGAGGAGATCAGCAAGTTGCTTGCTAAATATGACATCAAACATGGACCCATAGTCGACACTACTCGAAAGCTGTACGAGAAGAAGCTTGAAAAGGTGATGAAGAGCGCTCCAGTGCAATCCTCGCCTGATAAGACCTACTACAGAGAGGAAGcgGAGGAAATTACCTACATCACGTACCACCAGTCCAGTCCGGTTCAAGCGGTGTATTCGGACATGCTGAAACGAAGAGGCAACGTTGAGCCAGATGAAGCCAAGGAATCGGACCAAGGCACAGAGCCCCCTATCCAGAGCACAAACagagcagccaatcacagcacaaTACGATCCGGGGAGCTGGTCAGAAAGTCTGGAGGCTGGAGCCTGTGGAAGGTGatacggctgctgctgctgttagcCGTGTTAGCAGCTTTCCTCTACTACTCCTACTGCCGTCTGAACGATATAGAAAATCCTTTTGCGATTCAATAAAAAgataatcagttttttttttcctcattccaATACAAATATCTTATAAACAGTCactccagaaaaatgcgattatgcgatcgcataattcaatgcataatcagccaaagtcttttttcaaatacgccacataaattgcagatttctgcacaaaatatgcgg

Function

NR:

description
PREDICTED: emerin-like

GO: NA

KEGG:

id description
ko04915 Estrogen signaling pathway

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800713.1 True 951 mRNA 0.47 7 35298496 35304015

Neighbor

gene id symbol gene type direction distance location
mrpl49 NA coding downstream 11286 35286360 ~ 35287210 (-)
las1l las1l,LOC103461358 coding downstream 29067 35266701 ~ 35269429 (-)
crebzf crebzf coding downstream 32423 35262964 ~ 35266073 (-)
cfap126 NA coding downstream 132239 35164743 ~ 35166257 (-)
tmed4 LOC104954229,LOC100701503,LOC102209141,LOC106566412,LOC102295556 coding downstream 212049 35078799 ~ 35086447 (-)
flna LOC100702302 coding upstream 7179 35311194 ~ 35384229 (-)
LOC120559648 LOC103362257,LOC106633114,LOC101486280 coding upstream 949161 36253176 ~ 36270025 (-)
plch2a plch2,LOC106935153 coding upstream 968856 36272871 ~ 36447792 (-)
igf3 LOC108228312 coding upstream 1277508 36581523 ~ 36588712 (-)
si:dkeyp-110g5.4 NA coding upstream 1295558 36599573 ~ 36606768 (-)
G55409 NA non-coding downstream 51949 35245657 ~ 35246547 (-)
G55400 atp2b3,LOC103376147 non-coding downstream 81877 35214088 ~ 35216619 (-)
G55396 NA non-coding downstream 121439 35176798 ~ 35177057 (-)
G55376 NA non-coding downstream 147873 35110380 ~ 35150623 (-)
G55368 NA non-coding downstream 198239 35098749 ~ 35100257 (-)
G55496 NA non-coding upstream 110992 35415007 ~ 35417799 (-)
LOC120559180 NA non-coding upstream 128368 35432383 ~ 35448470 (-)
G55511 NA non-coding upstream 181717 35485732 ~ 35634395 (-)
G55505 NA non-coding upstream 187088 35491103 ~ 35709461 (-)
G55514 NA non-coding upstream 190535 35494550 ~ 35503023 (-)
LOC120559165 NA other downstream 20642 35269896 ~ 35277854 (-)
ntsr1 ntsr1,LOC103361890,LOC104959625 other downstream 1007427 34236566 ~ 34291069 (-)
G55124 fam110a,LOC104960682 other downstream 1171001 34024018 ~ 34127495 (-)
G55131 NA other downstream 1205378 34087970 ~ 34093118 (-)
lamb2 NA other downstream 1683556 33555800 ~ 33614940 (-)
G55492 NA other upstream 100589 35404604 ~ 35409766 (-)
si:ch73-70k4.1 NA other upstream 570607 35874622 ~ 35898736 (-)
LOC120559361 NA other upstream 1253515 36557530 ~ 36559959 (-)
G56160 NA other upstream 1377884 36681899 ~ 36724209 (-)
LOC120559655 mtch1,LOC102799640 other upstream 1419223 36723238 ~ 36744132 (-)

Expression


Co-expression Network