her3


Basic Information

Item Value
gene id her3
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 25866763 ~ 25867978 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800775.1
TTCAAGGAAACCAGAAAAGGACTAACAGAATGGTGGCGACGACAGACTGCATAGAAAAGTCCAAACCCATCGCTGGAAACAGGgtatCCAAACCACTCATGGAAAAGAAACGAAGAGCTCGCATTAACAAGTGTTTGGACCAGTTAAAATCTCTTCTGGAGAGCTACTACAGCAGTAGTaTTCGAAAGCGCAAACTGGAAAAGGCCGACATCTTGGAGCTTACTGTGAAACATCTAAGGAACATCCAAAAGATCCAGTGTTGCACTGCCGCTGCTTCCGAGTTCTCTGATTATCAAACTGGTTTTCGCAGTTGCATGGCAAACGTCAACCAGTATTTGCTGATGGCCGACAACTTGAACGGGAGCGACAGCTGGATGTTATCGCAGCTTTCCAGTAAACTCTGTCGCTCTCGGGGACGGGAGGAAGTCTTCAGCACCAAGGACAGCAGCCGGGGCCAAGCAGCAGAGACACAGGATGAGGTGCGGATACTTCTTCCATCGGCAGCTGGGCCTGAGGAAAGAAAAACGGCCAAATCTAAAACTCTGAAACCGCTTAGTGCAAGCACGTCTCCTTGTTTACCGAGCGAAGACGCACGACAGTCATCTAGAACCAAACTGACTGTCCCTGTTGCGGCACTCAGACAAAGTACTCATGAAAAAAGTTTAAGTAACAAGATATGTCCCCCTGTCAGTTACAGGAATGAAGTTGCAAAACCTCAGCACAATGTCTGGCGGCCTTGGTAAAACTGTAGATATCCTAATTCATAGTTTGGTTGAATGTTTATTATTGCACTGTATAGATTACA

Function

NR:

description
transcription factor HES-3

GO: NA

KEGG:

id description
K09088 HES3; hairy and enhancer of split 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800775.1 True 805 mRNA 0.47 4 25866763 25867978

Neighbor

gene id symbol gene type direction distance location
LOC120559217 LOC103362599 coding upstream 8882 25853734 ~ 25857881 (+)
LOC120559220 NA coding upstream 26331 25834546 ~ 25840432 (+)
LOC120559218 NA coding upstream 36861 25823768 ~ 25829902 (+)
LOC120559463 NA coding upstream 47433 25815356 ~ 25819330 (+)
rer1 rer1 coding upstream 60602 25794731 ~ 25806161 (+)
espn espn coding downstream 133314 26001292 ~ 26050486 (+)
arhgef16 arhgef16 coding downstream 183559 26051537 ~ 26071198 (+)
si:dkeyp-100a1.6 NA coding downstream 216686 26084664 ~ 26086372 (+)
zgc:154075 LOC104945171,LOC101464044,LOC102304528,LOC100692795,LOC102780086,LOC103362596 coding downstream 234670 26102648 ~ 26109344 (+)
LOC120559097 NA coding downstream 259339 26127317 ~ 26136177 (+)
G53056 NA non-coding upstream 55716 25809713 ~ 25811047 (+)
LOC120558677 NA non-coding upstream 851365 25009989 ~ 25015398 (+)
G52892 NA non-coding upstream 906660 24959816 ~ 24960103 (+)
G52827 LOC107550338,LOC103365918,LOC107551495,LOC104947949 non-coding upstream 1113583 24751895 ~ 24753180 (+)
G52817 NA non-coding upstream 1160857 24705538 ~ 24705906 (+)
LOC120559215 NA non-coding downstream 127255 25995233 ~ 25997094 (+)
G53109 NA non-coding downstream 228381 26096359 ~ 26099635 (+)
G53221 NA non-coding downstream 457243 26325221 ~ 26325468 (+)
G53222 NA non-coding downstream 457941 26325919 ~ 26329616 (+)
G53223 LOC103362778,LOC108236819,LOC101165391 non-coding downstream 462106 26330084 ~ 26330628 (+)
tprg1l tprg1l,LOC102784883,LOC106513028 other upstream 118442 25743589 ~ 25748321 (+)
G52871 LOC104956590 other upstream 909433 24953442 ~ 24957330 (+)
LOC120559118 LOC102791662 other upstream 921443 24940795 ~ 24945320 (+)
ctnnbip1 ctnnbip1 other upstream 2052357 23791447 ~ 23814406 (+)
tmem201 tmem201,LOC102777799 other upstream 2101598 23746365 ~ 23765165 (+)
G53096 ybx1 other downstream 203607 26071585 ~ 26076664 (+)
G53232 LOC104966952,LOC103362776,LOC102800046,LOC102208894 other downstream 484482 26352460 ~ 26353463 (+)
LOC120559113 LOC108236696,LOC104966950,LOC103362773,LOC103384494 other downstream 510214 26378192 ~ 26383047 (+)
atp5f1e NA other downstream 575072 26443050 ~ 26444890 (+)
LOC120559571 vapb,LOC100711919,LOC102796136,LOC101481364 other downstream 615554 26483532 ~ 26537351 (+)

Expression


Co-expression Network