prdm2a


Basic Information

Item Value
gene id prdm2a
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 25174578 ~ 25184231 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800820.1
gCCATAATTTTGTTGGTACattggggaagaaaaaaaaaaacaacacaactgaACACAACCTGCAGGAGACGAATAAACCGTTCTACGGCAGTTTGTTTGGTTAACGCAAAAAGAGAATCCTGTGTGTTCATCTGTCAAACAAAACATGTCTTCAACGTTGTACTGACCATTAAAATGGTGTGACATCTGTCAAAAGTCTTGTGTGACAGACTTCCTTCTGTGAGCTGAATACAACCTCCACAAAAGATGGAGGACTCGCCTCACTTGTACATCTCTGAATTTGGAGACAATGAGGatatggaggaggaagaggaggaggaggaggaggaggaagagcgAGCAGCGGACGACGACAACTACATTTATAAAGAGGAAACTAACATGGAATCAGACATGATTAAGTCACTGTACCCAGATCTCCATAAACATCCAAACCAGGATACTGAGAGAGACTGGAACTCTTTTCCCTGCCAGCACTGTGAGAGACAATTTACCAGCAAACAAGGCTTAGAACGACACATGCACATCCACGCTTTGGCGAACAATGagacacacgcatacaaaaGCAATAAGAGCAACACATCTTTTGGTTCAAATCTGGGTCAGCTGCAGCATGAGAAGATGAAGCCTCTGGATTCAGTAAGCTCAGTCACGCAGCTTCATACTCTATCCCCCACTAGCTCTAACACTTCCATTTTGTCGGCTGGTGACCACACTGCTCAGCCAGACAAACTGGGAATATTAGAGGGGCATCATGCTTGCAAGTACTGTGAAAAGATATTCACTACACATACCAACAAGCGACGACATGAGCACAGGATCCACGAGCAGCACCAGCAAGTCACTGATTTGGAAAAAACCCAGCTGCCCCAAGAGGAAAATCTCCAGAGGACACTCTGTGAAAAATCTCAACAGGAAACCGAGCTTGGTGACAATACAGCACCTGCAGCTGTTGTGGAGAATATAGTGGAAGAAGCACAACAATACATGCTGGATGTCTCCAGCAATATTTCAGAGAATCTGAGCTTTTATATTGATGGAAAGATAGTGTCAACAAGTACAGTCAGTAGCTGTGAAGCAGCTGAGGTTCATTCTGGGTCTTCGGCTATAGTTGGACTGGATGCCCTGATTCTAGATCCCACTCAAATAAGCCAGGTTTTAAATACAGATTCAGTAACAGGCAAAGAGATACCTGGTCAACCACTGGCAAAGAGAAGAACTGCAACACCACCTCTTTTACCACAAATTAAAACTGAACTGGAATCTGAGGCGGTTGTATCGTCTTCCTCATCTTCACTCGTATCTTCTTTGATAGAGAATCTACATCCTCAGAATACAGAGTCTACAGTTGCGCAGAAGGAAAgaactgtgtttctgtctccaaaGCTGAAGCAGCTCCTGGAAAAGCAGGATGGCCTTAAACCTACACTTGCCCTCATCGCAGATGGCCAGAAGCCTTGTtcacctgtctctctcgctGCCCTGCCTGCTGGATCAGGAAGGTTTAAAAGAAGGACTGGATCTCCACCAAGCTCTCCCCAGCAAAACCCAACATCTAAAGAAGAAACACCAGACACTGGATATTGTGATGCTGCAAGTACAGGGCAGATGGAGACCCAACATAGTTCACCTTTGCACCAAACAGCCAATGTGGAGGATGACACAACTCCACCTGTGGAGGAGCCAACACTGACACCTATCTTGACAGAGAGCTGGCCCCCCGCGACCGGCGGTAACTCCTGTAACCAGCAGCCACTGGATCTCTCTAATACAGTCAAAAGCAATGGAGATGTAGCTTCAGCTGATGCTGTGCTGGATTTGAGTTTGCAAAAAAAGACCCTTGGTGATACTGAACCCACATTAAATTTAGTTTCACAGGCAATTTTGAAAGAAGGAAAATCATGCGTGGTGGAGACAGCCTTGATGAATATTGGAGAGCAAAATGTAAGCCTAGGGAATCTTGAGACCCCTTTAGTCACTGACTTCACCATATTTACAGGTCCAGATATGATGACCCAATTGGAGCCTGTGGCAGAAGGGCTTGTTTATGGACTTGCACTTCCCTCTGATTCTCTGACTCCATcacctgcctccctccctcccaccccTGTTGCTTTGCAGCCAGCTTCACCATGCACTATAGCATTTGCTTCCCCAGCCTCACACACAGCACTCCCTACTGCTCCTTCATTAATCACAGTTTTGGCACCACCACATATTTCTAATCCTTCAAGCCAACCAATCCAGGTATTAGCCCCAAATATATCTTCGGAGCCCCTGGTAATTTGCACCGaaaatgcattacatttttcagAGTGTGATTTAACTACTGCATTTGCCACCGCAAATTCTGCAAACCCTGTTACTCTCTCCCAGTCCTTTGATCCAAATCTAAATCTACCTGGCCATGTGTTTCTCTCTGATCCACTAGCTCTTAATCCGCCTATAGCTGAGTCCACTCCTATGTCAGAAGTGCCATTCACGCCCACTGTAACTTTAACTGATTCACTCATCAACTCTTACAACATTACCAGCAACACAGTGTTGATAGAGTGCACAATAGCTCTTGAAGCCCCAGGGAGTATAGTCCCTGCTGCAGTTACCTTACAAGAAAACACTGCTGAGCCTCCCGCACCTACACAGATGGTTGTTAATCACATAGAACAGCAACAGATTGTATCAATGCCCAATCCTCAAACTGTGGACCCCACTATTCTTATGTCCTCCATCTCAGAATCAGTAACTCTATCCACCACCGCCTCAGTGATATCTGATTGTCCTACTGTGGGTGAATCAAGTCCTGACCCAGAGCCTGTTGTTAATACAGAGTCACCAACCATAAAAGAGGAGGAACCTGCTGACAGTACTGTTTCCATACCCGAAATCTCATCTAAGACCTCACCTTCTTCTGAGAAAGCTGTAGAGGACGAATCCTTAAACAACATACCAAGTGATGCACAACAGCAGACTTTCACCAAGAATTTTATCTGCAATGTGTGCGATAATCTTTTTCATTCAATGAAAGAACTGAGCCATCACGTAGGTGACCATGCTGATGAATGGCCCTACAAATGTGAGTTCTGCGTGCTGCTCTTCAGCAAACCCTCCGCTTTGCTTGATCATCGATTAAGCCTCCACGGCGTCGGCAAGACTTACGTTTGCAGCGCATGTGCAAAAGAATTTGTATACCTTTGTAATCTGAAACAGCATCAGGAAGAATTGCATCCTGGCCAGCAGTGTACATACACAGAAGACGAAAAGGGAAAACTAAGACCTCAGAACTACAATAACTCAACAAAAGTCCACACGCAGCCCTTGGTGCCCGATGCCGCAGAGGAACCCAGGAAAGTGGTGAAAAAGGAAGAAGGTGAAGTAGATGTGGCGGCTGAAGAACTGTTtacaacaataaaaatgatGGCCTCAGACGGAGCCAAAGCCAAAGGCCCTGATGTTCGTCTTGGCATTAACCAACATTATCCCAGCTTTAAGCCCCCTCCATTTCCTTACCATAACAGATCACCTGCTGGCTCAGTGGCTTCAGCCACAAACTTCACCACCCACAACATCCCACAAACCTTTAGTACGGCTATTCGGTGCACCAAGTGTGGAAAGAGCTTTGATAACATGCCAGAGTTACACAAGCATATCCTGGCTTGTGCAAATGCCAGTGATAAAAGGCGATACACGCCCAAAAGGAATCCTATTCCACTGCGGCACTTTGCAAAAACTCAAAATGGAGTTCTGTCTACCACCAATTCTACTAACGGACTAAATGCTTCGAACAGGCCCAGCCAGTCAAACAGGTCCAAACCTAACCAAGAATCTCCGGTGAATGTGAAGTTCAAGGTGttgaacaaaaagaagaaaaagttgGTCCAAAGGGTCATGCCACAGAGGAACAAGCCAGTCCCTTCATCAAATAAAATGTCACCTGCACAGGTGGATGAGCATCAGGAGATCTTTGTCTGCCCACACTGTAGCAGGGAGTTCACAATGCGTCGCAGCAGAACCAAACACATGGCAGTCTGCCCCAAGAAACCGAAAGAGgtgaagaaaaggaaagaaggaggAATCTCCGTGACAAAGGAAAATAATAGACACCTGCATAGAGGGGTTGAAGAGAAACAACAGGCCTCGCCTCAGCATAAAACAAGACTCCAGACTTCTGGCCCTGCTAAAAGGTCCGCAATCCTACCAGTGCAAACGGTCTTTTCAAACAAAAGAagtaaaataattataaaagagAGCACGCAGCCAAAACAAGAGACACCCACTCTGAATGAACTTCCCATTGTTCGCACTTTCAACCCCTCTATGCGCCAGTACAGCAGAGTGCAGCATAACGTCAAAGGAATCCCCATTAAAATCACCATAGTGAAACCACAACGGGCTGCACCACAGAAGGATGAGCTGCCTCCCGCCCAGAACCGAGAGGAGGCAACCGGAGCCGTCCCCAACAGCTCTGAGCAGAGTCCTACAGCCTGAAGACTACTCAGCTACCCATTGGGGATCATCAGgatgcTGCTGTGTTGAGCTCCTCATACACACTTGTGTCACAGTGATACTACTATAAAGGGAGGTAACTGCTAATCACACTGTAAACCCCACTGACCCAAACTGCATCATACTGTACAATAATAACTGGATTGAGGATGGATAAAACAGACGACACTGCAGTGAGTGGATGTATTTAACTGTGTATTTGAATGCTTTTGTAGTACCTTGGAGTTTTGTAGATTTCTCCTTCACTTCATACACTTTCTGTCAATGGCGTGGATTTGCACTTTGAAGTTAATCTGACTGCTACATGTCACAAATTTGAAAGGAAGTGGGAGGGAGCTGGAAGGCTGCTCTCCTTTCCTACTTGGGTGGGTTATTTAGAGAGGATGGCAGGTGGCAATCAGTCTCAGCATGCATTTGCACTTTTCTTTAATTGTAGTCTGTGGCCTTTTGGTTTAAACTCTTACTGCATGCTGTGAGCTTGTACTATAGTAACAATAATTTAGGATGGATTATGTTGATTCAATTAGGCCTTAAACACTTAATCTGATGTTTAGTCTGACAATAACCAGTGTAATTACATAATGGAAGACGCATCAAGATCTAAACGCAAGACTACGGAATCATGGAAAAGTAACACTCTATAGTACAGTGTAACATTGTCCACAAGCTACCTATCAAAACGCTTAAGGATATCGACACTGTTGATGAAAGTCAGCGTTTTCAGTTTTGGAGGGAATGTACCATTAGTAGATATATTGAAAatcaaaattgtatttaatcTGGTTGGCCCAGTTGCTTTGTATTTGTATGAAAGTTTTGAGAATAATTCCTTGAATGTGCCATTAAATGTATGTAATATGACTAAATGTGGCACAAAGACGATAAAGAATAAACATAGTTTGCTGTTTCCCTCATATGGGATATATTTGGCACTGCAATTGCAAACAGAAGTACCATAATCTGTAAAAGTTGGATGCATCATTGACACCTTTACAATAATAAGAGTTCAACTCTAAACAGCATTGACAGAGCTAACTTCTGGAATCCTGAAACACTGAAATAGTTCCAGTAGTCCAGTAGGCTTTATTTTGTACCCATTTCATAAAATGCTTGTCAGAAATAtgattttgtgtttatttttcccCATTCAATGACTGTAACTCATATTAGATATTCCATCTGTTTAGGTCTTTGTCATCTGTAGCATACAGGTTTATAATCTGTCAACAGTTTATTGTGTGAAGTGTGTATAATAAATCCCAACTTGCATAAATCACAAAATGGAAATGTAAGATCAATTATGGGGTACATTTTCGCTGGAACCCTGTAGTGACATGAAATGATTGTGGCAAGTTGTCGCTAATCGCAAAGAGTGAGTGTAATGAATTGTATCTTTGATTTCATTTTGTATAAGCTTCTAGTTTGAAGAGCCAGTGCTATACAGTGTAGTTATTTAATTACGATTAAATTGAGTTATATTAATTTGGGTAAactaaaacagagagagagagagagagagagagagagaggactttATTGCCTTTTCAACCCTTGCTGGTAATATCTTCATTCAGATGGACTGCAATGTGTTGGATGTACAGGGTGGTTTAGAAGACTGTTATTTAACTGTGAAAAGTGCTTGTAGCATTTCGAAGTATAAATTGAGTCatgtatatttattaataattttaaATCATGTTATCAATATCTGAACAGGTCCTCTGTATGATTTGCACTAAAGTTTTTTCAAGCGAGTGTTCAAAATAAATGGAGAATGTTAAAAGATTG

Function

NR:

description
PR domain zinc finger protein 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800820.1 True 6291 mRNA 0.43 5 25174578 25184231

Neighbor

gene id symbol gene type direction distance location
si:ch211-156j16.1 NA coding upstream 9384 25155352 ~ 25165194 (+)
LOC120558685 foxj3,LOC100698572,LOC102787620 coding upstream 20077 25088905 ~ 25154501 (+)
zmynd12 zmynd12 coding upstream 109402 25058460 ~ 25065176 (+)
LOC120558682 LOC103353010 coding upstream 116180 25055137 ~ 25058398 (+)
znf362b LOC104920215,LOC103353008 coding upstream 140063 25022625 ~ 25034515 (+)
LOC120558931 kazn,LOC106524179,LOC107088875,LOC100696443 coding downstream 4475 25188706 ~ 25405950 (+)
LOC120558932 NA coding downstream 225497 25409728 ~ 25414753 (+)
tmem51a NA coding downstream 238651 25422882 ~ 25425937 (+)
LOC120558819 NA coding downstream 256130 25440361 ~ 25443840 (+)
prdm16 prdm16,LOC102785463 coding downstream 347870 25532101 ~ 25714390 (+)
LOC120558677 NA non-coding upstream 159180 25009989 ~ 25015398 (+)
G52892 NA non-coding upstream 214475 24959816 ~ 24960103 (+)
G52827 LOC107550338,LOC103365918,LOC107551495,LOC104947949 non-coding upstream 421398 24751895 ~ 24753180 (+)
G52817 NA non-coding upstream 468672 24705538 ~ 24705906 (+)
G52756 NA non-coding upstream 784451 24387153 ~ 24390127 (+)
G53056 NA non-coding downstream 625482 25809713 ~ 25811047 (+)
LOC120559215 NA non-coding downstream 811002 25995233 ~ 25997094 (+)
G53109 NA non-coding downstream 912128 26096359 ~ 26099635 (+)
G53221 NA non-coding downstream 1140990 26325221 ~ 26325468 (+)
G53222 NA non-coding downstream 1141688 26325919 ~ 26329616 (+)
G52871 LOC104956590 other upstream 217248 24953442 ~ 24957330 (+)
LOC120559118 LOC102791662 other upstream 229258 24940795 ~ 24945320 (+)
ctnnbip1 ctnnbip1 other upstream 1360172 23791447 ~ 23814406 (+)
tmem201 tmem201,LOC102777799 other upstream 1409413 23746365 ~ 23765165 (+)
atxn7l2b kcnc4 other upstream 2106099 22991252 ~ 23068479 (+)
tprg1l tprg1l,LOC102784883,LOC106513028 other downstream 559358 25743589 ~ 25748321 (+)
G53096 ybx1 other downstream 887354 26071585 ~ 26076664 (+)
G53232 LOC104966952,LOC103362776,LOC102800046,LOC102208894 other downstream 1168229 26352460 ~ 26353463 (+)
LOC120559113 LOC108236696,LOC104966950,LOC103362773,LOC103384494 other downstream 1193961 26378192 ~ 26383047 (+)
atp5f1e NA other downstream 1258819 26443050 ~ 26444890 (+)

Expression


Co-expression Network