c5h1orf127 (LOC104954118)


Basic Information

Item Value
gene id c5h1orf127
gene name LOC104954118
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 24013889 ~ 24020924 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800998.1
aaaacattggtgaCAGTTGAAGTTTCGCTCATTGTAATCATCAATATTTCAAATGACGAAATGGAACAAGTGACATCAGCCCACTTACCTACAAATAGGCGAGGGTGAGACTGCCCATTCAAGTTTTCATCAGTGGAAGTGACATGGATCACATAAGATTTGGCATCCTACTTAGAACTATTGTTTTACAATGCTTTATCATGAGGACTGTGCTTTCCATTCAGAAAAGAGAATGGATTGATACCCCAACAGCAAGATTAACAGAAGGAGATGTGGCATGTTTTTCTGAATACATGGAGATGTGGATACACAGTGCAAGGATTGAAGGGTTGGGACTCTGGCTGTCTGGGGCCTTACAGACCCAAGTCAACCTTGCTTCTCTGGATCACCTAAATCTCCAGCTGTCTGACTGTGGATTCGCATTGCACAAAGAGGCTGACAAGAACTTTATTTTTAGAGTCAGTTACACTGGATGTTTTGTCCAGCAACAGCATGGCTACCATATCCTGACACTGCATCTGGTGAAGAGGATAAATCGATTCAGAGGCAGACCTCATAGTTTCATAATGAAGTGTCCCCTGTTTTCTGTACTGCCCAGCAGAGAGCAAATCCAATGTGACCCGGAGTATATTCAGgtgACCAGACAAGTTCCCTATGACATCTGGGACAATGAGCTGCAGTGGTCACTTTCTCTGAGCGATCACCTCATTGTAGCTCTGGAGGATGCCAGCCTGATTCAGATGAATATTGACATTAATGGACCAGACATTACAGTTCAAGGCAGGAGAAGGGAGGTCTTGAGCCCTGTCAAAGTAATGGAAAATGAAGCGGAATTCTTGGCCTTGAAGCTGGTCAGTGGTCAGTATGCCTACAGTATGGAAGCTACGTGTCCAAAAGTGACCACGTCCACACCAGAGGAGACTGTGCTGCACATTTTTAAACGGCGTATGGGTTTGACCAAGCGGGGCAGCGCTGACTACGAAGCACTGACAGTCAGTAATGTGTCGGTGAACCAGACAGATAATTTCACTGTGCATGAGACGAGTGAATTTGTGACACTGACCATGCCTACAACCCAAATACTCCAGACCAAGACCTGCACAGACAGCAAACAACTCCTGCAGCCGTTCTGTAGGGTGGATGTTGTGCTCACCTTCAGAGAGACAAATCACAAAATGCACTGGACCATGGAGAACACACTGCCATGCACAGCCAGGCCTGCTGAGTCACACATCACATCCTCTCCTGGTCCAAACACCACAACCTCGTCCACACTCAACTTTAAATACGACAGTTTAACTACAGAACAGCCGCTGCTGGACCGCCTAAATGAGAGAGCTCCATTTGAAGAGATGACTACAGAGCTTTCCACAACTAATTCACCTCACACACAGACGGAGGCCCGCAGCTTTAATTTCCACACTGATGAGATGTCAGAGAGTCAGAGTGGAAATTTGTCTTCTGGGTTTGACGGAGACACCATTACTTCCAATAATGCCACTGAAATAAGCTTTTTTGATTTTATAAATGTGACCATACATACTTCAGCAGAGCCAGATTTCCTTGAGTCATCAGCCACAGCTGAACCATCAGAAACATCTGTCCTCACAATGGTTCCACCTGAAGAAGAATACCAACAATTCAACACAACCAGTGGGAATAAAGAGCAGCAAAAGCAGAGAAGACTGAAGTGGATCTGGGAGGACTAGAAACCTAACAGAAACAGCATGATCCAGTGCACCGATTCTGGTAGCAGGTGTCAGACTTAGCAAACTTCAACATAATTCATATAGTGAATGATGTCAAATTCAAAAACCATGTTTAGCATCCCAAAAAATGtatatgacattttaaaatgaaatgtccTTCTTTCTAAGTCATGCTAGACTTCAAAGACAGTTCCAATTAGTGACAACACTTGATTCACTTCTTTTGTTTTAATTCTCATTGGTGCCACGTACTCCACGTCTGTTTGCAGTCTTGAAAGGTGATGCTGTGGTCAGTCAGCGCTGTGAAGGTTGATTATACAAGCAGAAATACAGGCAGACCTCTGCCAGTCGTTGCCTGAGGGAGGACATTATCCAGACGCAGACAAGGCAGGCGTTAAATAAACATGTCTCTATCCGAGCAGCACAACAGGCTGACGTAGAGAAGACCCTGCAGCTGGTACAGCTGATGCTGCCTTCCAGAGAAGCTTTGTGTTAGAGAAGCTCAtaaaaaatacttgttttttaatGCCACAGACTGTCAATGAATCTCTTTCAGAAGTTTTATGTTTCTTAGGGTGAaatagacactttacaaatgtgcttttttcttctgttaaaaataaatcaatca
>XM_039800999.1
aaaacattggtgaCAGTTGAAGTTTCGCTCATTGTAATCATCAATATTTCAAATGACGAAATGGAACAAGTGACATCAGCCCACTTACCTACAAATAGGCGAGGGTGAGACTGCCCATTCAAGTTTTCATCAGTGGAAGTGACATGGATCACATAAGATTTGGCATCCTACTTAGAACTATTGTTTTACAATGCTTTATCATGAGGACTGTGCTTTCCATTCAGAAAAGAGAATGGATTGATACCCCAACAGCAAGATTAACAGAAGGAGATGTGGCATGTTTTTCTGAATACATGGAGATGTGGATACACAGTGCAAGGATTGAAGGGTTGGGACTCTGGCTGTCTGGGGCCTTACAGACCCAAGTCAACCTTGCTTCTCTGGATCACCTAAATCTCCAGCTGTCTGACTGTGGATTCGCATTGCACAAAGAGGCTGACAAGAACTTTATTTTTAGAGTCAGTTACACTGGATGTTTTGTCCAGCAACAGCATGGCTACCATATCCTGACACTGCATCTGGTGAAGAGGATAAATCGATTCAGAGGCAGACCTCATAGTTTCATAATGAAGTGTCCCCTGTTTTCTGTACTGCCCAGCAGAGAGCAAATCCAATGTGACCCGGAGTATATTCAGgtgACCAGACAAGTTCCCTATGACATCTGGGACAATGAGCTGCAGTGGTCACTTTCTCTGAGCGATCACCTCATTGTAGCTCTGGAGGATGCCAGCCTGATTCAGATGAATATTGACATTAATGGACCAGACATTACAGTTCAAGGCAGGAGAAGGGAGGTCTTGAGCCCTGTCAAAGTAATGGAAAATGAAGCGGAATTCTTGGCCTTGAAGCTGGTCAGTGGTCAGTATGCCTACAGTATGGAAGCTACGTGTCCAAAAGTGACCACGTCCACACCAGAGGAGACTGTGCTGCACATTTTTAAACGGCGTATGGGTTTGACCAAGCGGGGCAGCGCTGACTACGAAGCACTGACAGTCAGTAATGTGTCGGTGAACCAGACAGATAATTTCACTGTGCATGAGACGAGTGAATTTGTGACACTGACCATGCCTACAACCCAAATACTCCAGACCAAGACCTGCACAGACAGCAAACAACTCCTGCAGCCGTTCTGTAGGGTGGATGTTGTGCTCACCTTCAGAGAGACAAATCACAAAATGCACTGGACCATGGAGAACACACTGCCATGCACAGCAGAGCCAGATTTCCTTGAGTCATCAGCCACAGCTGAACCATCAGAAACATCTGTCCTCACAATGGTTCCACCTGAAGAAGAATACCAACAATTCAACACAACCAGTGGGAATAAAGAGCAGCAAAAGCAGAGAAGACTGAAGTGGATCTGGGAGGACTAGAAACCTAACAGAAACAGCATGATCCAGTGCACCGATTCTGGTAGCAGGTGTCAGACTTAGCAAACTTCAACATAATTCATATAGTGAATGATGTCAAATTCAAAAACCATGTTTAGCATCCCAAAAAATGtatatgacattttaaaatgaaatgtccTTCTTTCTAAGTCATGCTAGACTTCAAAGACAGTTCCAATTAGTGACAACACTTGATTCACTTCTTTTGTTTTAATTCTCATTGGTGCCACGTACTCCACGTCTGTTTGCAGTCTTGAAAGGTGATGCTGTGGTCAGTCAGCGCTGTGAAGGTTGATTATACAAGCAGAAATACAGGCAGACCTCTGCCAGTCGTTGCCTGAGGGAGGACATTATCCAGACGCAGACAAGGCAGGCGTTAAATAAACATGTCTCTATCCGAGCAGCACAACAGGCTGACGTAGAGAAGACCCTGCAGCTGGTACAGCTGATGCTGCCTTCCAGAGAAGCTTTGTGTTAGAGAAGCTCAtaaaaaatacttgttttttaatGCCACAGACTGTCAATGAATCTCTTTCAGAAGTTTTATGTTTCTTAGGGTGAaatagacactttacaaatgtgcttttttcttctgttaaaaataaatcaatca
>XM_039801000.1
aaaacattggtgaCAGTTGAAGTTTCGCTCATTGTAATCATCAATATTTCAAATGACGAAATGGAACAAGTGACATCAGCCCACTTACCTACAAATAGGCGAGGGTGAGACTGCCCATTCAAGTTTTCATCAGTGGAAGTGACATGGATCACATAAGATTTGGCATCCTACTTAGAACTATTGTTTTACAATGCTTTATCATGAGGACTGTGCTTTCCATTCAGAAAAGAGAATGGATTGATACCCCAACAGCAAGATTAACAGAAGGAGATGTGGCATGTTTTTCTGAATACATGGAGATGTGGATACACAGTGCAAGGATTGAAGGGTTGGGACTCTGGCTGTCTGGGGCCTTACAGACCCAAGTCAACCTTGCTTCTCTGGATCACCTAAATCTCCAGCTGTCTGACTGTGGATTCGCATTGCACAAAGAGGCTGACAAGAACTTTATTTTTAGAGTCAGTTACACTGGATGTTTTGTCCAGCAACAGCATGGCTACCATATCCTGACACTGCATCTGGTGAAGAGGATAAATCGATTCAGAGGCAGACCTCATAGTTTCATAATGAAGTGTCCCCTGTTTTCTGTACTGCCCAGCAGAGAGCAAATCCAATGTGACCCGGAGTATATTCAGgtgACCAGACAAGTTCCCTATGACATCTGGGACAATGAGCTGCAGTGGTCACTTTCTCTGAGCGATCACCTCATTGTAGCTCTGGAGGATGCCAGCCTGATTCAGATGAATATTGACATTAATGGACCAGACATTACAGTTCAAGGCAGGAGAAGGGAGGTCTTGAGCCCTGTCAAAGTAATGGAAAATGAAGCGGAATTCTTGGCCTTGAAGCTGGTCAGTGGTCAGTATGCCTACAGTATGGAAGCTACGTGTCCAAAAGTGACCACGTCCACACCAGAGGAGACTGTGCTGCACATTTTTAAACGGCGTATGGGTTTGACCAAGCGGGGCAGCGCTGACTACGAAGCACTGACAGTCAGTAATGTGTCGGTGAACCAGACAGATAATTTCACTGTGCATGAGACGAGTGAATTTGTGACACTGACCATGCCTACAACCCAAATACTCCAGACCAAGACCTGCACAGACAGCAAACAACTCCTGCAGCCGTTCTGTAGGGTGGATGTTGTGCTCACCTTCAGAGAGACAAATCACAAAATGCACTGGACCATGGAGAACACACTGCCATGCACAGAGCCAGATTTCCTTGAGTCATCAGCCACAGCTGAACCATCAGAAACATCTGTCCTCACAATGGTTCCACCTGAAGAAGAATACCAACAATTCAACACAACCAGTGGGAATAAAGAGCAGCAAAAGCAGAGAAGACTGAAGTGGATCTGGGAGGACTAGAAACCTAACAGAAACAGCATGATCCAGTGCACCGATTCTGGTAGCAGGTGTCAGACTTAGCAAACTTCAACATAATTCATATAGTGAATGATGTCAAATTCAAAAACCATGTTTAGCATCCCAAAAAATGtatatgacattttaaaatgaaatgtccTTCTTTCTAAGTCATGCTAGACTTCAAAGACAGTTCCAATTAGTGACAACACTTGATTCACTTCTTTTGTTTTAATTCTCATTGGTGCCACGTACTCCACGTCTGTTTGCAGTCTTGAAAGGTGATGCTGTGGTCAGTCAGCGCTGTGAAGGTTGATTATACAAGCAGAAATACAGGCAGACCTCTGCCAGTCGTTGCCTGAGGGAGGACATTATCCAGACGCAGACAAGGCAGGCGTTAAATAAACATGTCTCTATCCGAGCAGCACAACAGGCTGACGTAGAGAAGACCCTGCAGCTGGTACAGCTGATGCTGCCTTCCAGAGAAGCTTTGTGTTAGAGAAGCTCAtaaaaaatacttgttttttaatGCCACAGACTGTCAATGAATCTCTTTCAGAAGTTTTATGTTTCTTAGGGTGAaatagacactttacaaatgtgcttttttcttctgttaaaaataaatcaatca
>XM_039801001.1
aaaacattggtgaCAGTTGAAGTTTCGCTCATTGTAATCATCAATATTTCAAATGACGAAATGGAACAAGTGACATCAGCCCACTTACCTACAAATAGGCGAGGGTGAGACTGCCCATTCAAGTTTTCATCAGTGGAAGTGACATGGATCACATAAGATTTGGCATCCTACTTAGAACTATTGTTTTACAATGCTTTATCATGAGGACTGTGCTTTCCATTCAGAAAAGAGAATGGATTGATACCCCAACAGCAAGATTAACAGAAGGAGATGTGGCATGTTTTTCTGAATACATGGAGATGTGGATACACAGTGCAAGGATTGAAGGGTTGGGACTCTGGCTGTCTGGGGCCTTACAGACCCAAGTCAACCTTGCTTCTCTGGATCACCTAAATCTCCAGCTGTCTGACTGTGGATTCGCATTGCACAAAGAGGCTGACAAGAACTTTATTTTTAGAGTCAGTTACACTGGATGTTTTGTCCAGCAACAGCATGGCTACCATATCCTGACACTGCATCTGGTGAAGAGGATAAATCGATTCAGAGGCAGACCTCATAGTTTCATAATGAAGTGTCCCCTGTTTTCTGTACTGCCCAGCAGAGAGCAAATCCAATGTGACCCGGAGTATATTCAGgtgACCAGACAAGTTCCCTATGACATCTGGGACAATGAGCTGCAGTGGTCACTTTCTCTGAGCGATCACCTCATTGTAGCTCTGGAGGATGCCAGCCTGATTCAGATGAATATTGACATTAATGGACCAGACATTACAGTTCAAGGCAGGAGAAGGGAGGTCTTGAGCCCTGTCAAAGTAATGGAAAATGAAGCGGAATTCTTGGCCTTGAAGCTGGTCAGTGGTCAGTATGCCTACAGTATGGAAGCTACGTGTCCAAAAGTGACCACGTCCACACCAGAGGAGACTGTGCTGCACATTTTTAAACGGCGTATGGGTTTGACCAAGCGGGGCAGCGCTGACTACGAAGCACTGACAGTCAGTAATGTGTCGGTGAACCAGACAGATAATTTCACTGTGCATGAGACGAGTGAATTTGTGACACTGACCATGCCTACAACCCAAATACTCCAGACCAAGACCTGCACAGACAGCAAACAACTCCTGCAGCCGTTCTGTAGGGTGGATGTTGTGCTCACCTTCAGAGAGACAAATCACAAAATGCACTGGACCATGGAGAACACACTGCCATGCACAGGCCTGCTGAGTCACACATCACATCCTCTCCTGGTCCAAACACCACAACCTCGTCCACACTCAACTTTAAATACGACAGTTTAACTACAGAACAGCCGCTGCTGGACCGCCTAAATGAGAGAGCTCCATTTGAAGAGATGACTACAGAGCTTTCCACAACTAATTCACCTCACACACAGACGGAGGCCCGCAGCTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800998.1 True 2340 mRNA 0.44 12 24013889 24020924
XM_039800999.1 False 2004 mRNA 0.44 12 24013889 24020924
XM_039801000.1 False 2001 mRNA 0.44 12 24013889 24020924
XM_039801001.1 False 1410 mRNA 0.46 12 24013889 24019998

Neighbor

gene id symbol gene type direction distance location
pgd pgd coding upstream 12453 23994946 ~ 24001436 (+)
kif1b kif1b coding upstream 20197 23928466 ~ 23993692 (+)
ube4b ube4b coding upstream 86423 23906900 ~ 23927466 (+)
rbp7a rbp7 coding upstream 108071 23903965 ~ 23905818 (+)
nmnat1 nmnat1 coding upstream 109850 23894213 ~ 23904039 (+)
casz1 casz1 coding downstream 183451 24204375 ~ 24253787 (+)
dffa dffa coding downstream 304337 24325261 ~ 24334067 (+)
LOC120559012 NA coding downstream 421964 24442888 ~ 24497151 (+)
cntn3a.1 NA coding downstream 538483 24559407 ~ 24630995 (+)
ttll9 ttll9 coding downstream 689859 24710783 ~ 24715633 (+)
G52629 NA non-coding upstream 588 24012963 ~ 24013301 (+)
G52628 tardbp,LOC106566965 non-coding upstream 2788 24009796 ~ 24011101 (+)
G52611 NA non-coding upstream 175927 23837692 ~ 23837962 (+)
G52604 NA non-coding upstream 223367 23789448 ~ 23790522 (+)
G52569 NA non-coding upstream 326528 23686352 ~ 23687361 (+)
LOC120558580 NA non-coding downstream 40139 24061063 ~ 24074008 (+)
G52728 NA non-coding downstream 249197 24270121 ~ 24274036 (+)
G52742 NA non-coding downstream 339882 24360806 ~ 24362267 (+)
G52756 NA non-coding downstream 366229 24387153 ~ 24390127 (+)
G52817 NA non-coding downstream 684614 24705538 ~ 24705906 (+)
ctnnbip1 ctnnbip1 other upstream 199483 23791447 ~ 23814406 (+)
tmem201 tmem201,LOC102777799 other upstream 248724 23746365 ~ 23765165 (+)
atxn7l2b kcnc4 other upstream 945410 22991252 ~ 23068479 (+)
lamtor5 lamtor5,LOC102787529 other upstream 1166951 22842044 ~ 22846938 (+)
LOC120559933 NA other upstream 1451368 22562154 ~ 22562521 (+)
LOC120559118 LOC102791662 other downstream 919871 24940795 ~ 24945320 (+)
G52871 LOC104956590 other downstream 932518 24953442 ~ 24957330 (+)
tprg1l tprg1l,LOC102784883,LOC106513028 other downstream 1722665 25743589 ~ 25748321 (+)
G53096 ybx1 other downstream 2050661 26071585 ~ 26076664 (+)
G53232 LOC104966952,LOC103362776,LOC102800046,LOC102208894 other downstream 2331536 26352460 ~ 26353463 (+)

Expression


Co-expression Network