LOC120559355 (klf15,LOC103367789,LOC101076255)


Basic Information

Item Value
gene id LOC120559355
gene name klf15,LOC103367789,LOC101076255
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 32381884 ~ 32392543 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801011.1
ATCATGTGACGGTTTAAGCGAACTAGCAGCCGTCTGGAGAGAGAGTGATCGCGTGTgtgtaagcgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgagagagaaaatgtGGAGGCGTACAGCAACGCAAAGACCGTGATGTGGAGTTACATTGCCATTACGCACTATTACGCACTGACAGCTACTTTCAAAAGAAGAGCGCACGTCGCCGAGAAGCGGAGTTTTGGATTCCTCGCATATACAAGAAGAATACCGAAGCGTTTCATCAACATTTAGCCAATCTCCAGCAGAACAGATTGATCTTCAGAGCAGAGTCCATTTGCCATTCATCCGCACAGGAATGGTGGATCACTTGCCGCTTGGTGAGGAGACCTTCCTGTGTTATACCGGCTCCCCGGGGTCTGACTACAACTGCCCCGGTCGCCACGCCAGTGGTGGTGCATTGCCGGGCATCATGGTAACTGACGCATGCATTTacgaccaccaccaccacccctacCAAGGGGTGAcgctctcctcctcccctctcctctcggAGGATGACCTCAGCGACTCCTCCAGCCCTCGTTCCTCCCTCTGCTCCAGCCCCGAGTCCTCGTCGCCCACGTTGTGCCACGTCCTCGGCTCCAGCTACGAaagcaggagcagcaggagcagtGGGAGCTGTAGCTCCTCAGGCGGAGAGAGTCAAGACAGCCTGCTGGACCTCCTCCTCTCGCATACTTCCCTCACCACCTCAATAAGCTCTAATGCCAGCAGCAGCTCTCACTCTTCCTCTCTATCCCTATCCTCCCCACCCTCATCTGACCCTGTTTTGTCCATGGGCCTGGCCTGGGAGTCCAAGAGGGAGCAGCGGTTTACTCTCCTCCATCAGCAGGCCAAAGAGGACTGTTACGAGTTCCCTGTCTTCCTGGACGAGCTGCAGGATCCTGCGGCGCTCCTCTTTCAGCCCACCTTGGAGGAGATCGAGGAGTTCCTTGAGGAGAACATGGCGGTGGCAatggagaaagaagaggaggggaGCGATGAGGCGATGTCACCAATGCCCGAGGATGCAGAGGCGGAACGTACGACGAGATTAGCAGAAGAACTGGTATCACAGAACTCAGATCAGACTGTGCCCGTGGCTCATTCTCCACTCTCCTCCTACACAGAGACCAAACATACACCATGTGCATTTGACATGGACAGCTCACCATCATCAGTGGATGTTACTAGTTCTAATTCTACTAGTAGTGTTGATGCGATCAAACAGGAGGATTGTGGTTCACCAGCAGCCTCATCAGAAGGTACCAGTACCTCCAGTGTGCCTGTAATCCTACAAATCCAGCCCATACAGATCAAACAAGAGCCCAACCTTAGTGCCATATCAGATGCTGTGCAAACCCAACTGCCCAAAACCCAATCCCAGCCAAACCAGGCCCCGTCGGACATCAAAATCGCCCAACTCCTGGTCAACATCCAGGGGCAGACCTTTGCCTTGGTGCCTCAGCTGCTTTCCCCAACAAACCTTACTGGCTCAAGCAAAAATGGAAGCATCGTTTCGCCCAAATTTGTGCGGATCGCACCAGTGCCCATTGCTGCAAAACCCATTGGGCTTGGGGAAGGCGGATTAGGCGGAGGCTCAACTGCAGGGGTTCTCGTTGGAGGTCAGAGGTACCAGAAGAGTGCAGTTGCAGACCTTATTAAAATGCACAAGTGCTCTTTTCCTGGCTGTAATAAGATGTACACCAAGAGCAGCCACCTAAAAGCCCATCTGAGGAGGCACACGGGGGAGAAGCCCTTCGCCTGCACGTGGCCCGGCTGTGGATGGAGATTCTCCCGGTCCGACGAGCTGTCCCGACACCGCCGCTCCCACTCGGGAGTGAAACCATACCAGTGCATCGTCTGTGAAAAGAAGTTTGCCCGCAGCGATCACCTGTCCAAACACCTCAAAGTCCACCGCTTTCCACGAAGTAGCAGGACAGGACGCTCTGCAAACTGA
>XM_039801012.1
ATGGTGGATCACTTGCCGCTTGGTGAGGAGACCTTCCTGTGTTATACCGGCTCCCCGGGGTCTGACTACAACTGCCCCGGTCGCCACGCCAGTGGTGGTGCATTGCCGGGCATCATGGTAACTGACGCATGCATTTacgaccaccaccaccacccctacCAAGGGGTGAcgctctcctcctcccctctcctctcggAGGATGACCTCAGCGACTCCTCCAGCCCTCGTTCCTCCCTCTGCTCCAGCCCCGAGTCCTCGTCGCCCACGTTGTGCCACGTCCTCGGCTCCAGCTACGAaagcaggagcagcaggagcagtGGGAGCTGTAGCTCCTCAGGCGGAGAGAGTCAAGACAGCCTGCTGGACCTCCTCCTCTCGCATACTTCCCTCACCACCTCAATAAGCTCTAATGCCAGCAGCAGCTCTCACTCTTCCTCTCTATCCCTATCCTCCCCACCCTCATCTGACCCTGTTTTGTCCATGGGCCTGGCCTGGGAGTCCAAGAGGGAGCAGCGGTTTACTCTCCTCCATCAGCAGGCCAAAGAGGACTGTTACGAGTTCCCTGTCTTCCTGGACGAGCTGCAGGATCCTGCGGCGCTCCTCTTTCAGCCCACCTTGGAGGAGATCGAGGAGTTCCTTGAGGAGAACATGGCGGTGGCAatggagaaagaagaggaggggaGCGATGAGGCGATGTCACCAATGCCCGAGGATGCAGAGGCGGAACGTACGACGAGATTAGCAGAAGAACTGGTATCACAGAACTCAGATCAGACTGTGCCCGTGGCTCATTCTCCACTCTCCTCCTACACAGAGACCAAACATACACCATGTGCATTTGACATGGACAGCTCACCATCATCAGTGGATGTTACTAGTTCTAATTCTACTAGTAGTGTTGATGCGATCAAACAGGAGGATTGTGGTTCACCAGCAGCCTCATCAGAAGGTACCAGTACCTCCAGTGTGCCTGTAATCCTACAAATCCAGCCCATACAGATCAAACAAGAGCCCAACCTTAGTGCCATATCAGATGCTGTGCAAACCCAACTGCCCAAAACCCAATCCCAGCCAAACCAGGCCCCGTCGGACATCAAAATCGCCCAACTCCTGGTCAACATCCAGGGGCAGACCTTTGCCTTGGTGCCTCAGCTGCTTTCCCCAACAAACCTTACTGGCTCAAGCAAAAATGGAAGCATCGTTTCGCCCAAATTTGTGCGGATCGCACCAGTGCCCATTGCTGCAAAACCCATTGGGCTTGGGGAAGGCGGATTAGGCGGAGGCTCAACTGCAGGGGTTCTCGTTGGAGGTCAGAGGTACCAGAAGAGTGCAGTTGCAGACCTTATTAAAATGCACAAGTGCTCTTTTCCTGGCTGTAATAAGATGTACACCAAGAGCAGCCACCTAAAAGCCCATCTGAGGAGGCACACGGGGGAGAAGCCCTTCGCCTGCACGTGGCCCGGCTGTGGATGGAGATTCTCCCGGTCCGACGAGCTGTCCCGACACCGCCGCTCCCACTCGGGAGTGAAACCATACCAGTGCATCGTCTGTGAAAAGAAGTTTGCCCGCAGCGATCACCTGTCCAAACACCTCAAAGTCCACCGCTTTCCACGAAGTAGCAGGACAGGACGCTCTGCAAACTGACTCTTCTGACCCCACTCTGACAGACTGACGCTTAAGCCGGAG

Function

symbol description
klf15 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Is expressed in several structures, including alar plate midbrain region; epidermal cell; epidermis; median fin fold; and midbrain. Orthologous to human KLF15 (Kruppel like factor 15).

NR:

description
PREDICTED: Krueppel-like factor 15

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K09210 KLF15; krueppel-like factor 15

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801011.1 True 1984 mRNA 0.54 3 32381926 32392543
XM_039801012.1 False 1686 mRNA 0.56 2 32381884 32390458

Neighbor

gene id symbol gene type direction distance location
LOC120559902 twist3b,LOC104929895,LOC103352822 coding downstream 912099 31465768 ~ 31469785 (-)
trnaq-uug_1 NA coding downstream 1154753 31227060 ~ 31227131 (-)
itchb itch,LOC100697163,LOC101474118,LOC102781723 coding downstream 1190528 31162519 ~ 31191356 (-)
e2f1 e2f1,LOC102780950 coding downstream 1240010 31128228 ~ 31141874 (-)
LOC120558334 NA coding downstream 1256793 31113760 ~ 31125091 (-)
cpne9 cpne9,LOC100694516,LOC101469997,LOC102776939 coding upstream 20521 32413064 ~ 32511065 (-)
si:ch211-220i18.4 LOC103373814,LOC108233036,LOC102211047,LOC100693975,LOC102782987,LOC102291816 coding upstream 177765 32570308 ~ 32586963 (-)
LOC120558593 LOC106915442,LOC106565226,LOC103152765,LOC106947658 coding upstream 296344 32688887 ~ 32694442 (-)
krt8 LOC104959359,LOC106525573,LOC108233108,LOC107391340,LOC107088570,LOC100702817,LOC103152763 coding upstream 328290 32720833 ~ 32726627 (-)
tmem106c tmem106c,LOC108233084 coding upstream 499722 32892265 ~ 32903713 (-)
G54631 NA non-coding downstream 382812 31998533 ~ 31999072 (-)
G54629 NA non-coding downstream 389333 31992349 ~ 31992551 (-)
G54618 NA non-coding downstream 437619 31941687 ~ 31944265 (-)
G54609 NA non-coding downstream 758554 31623121 ~ 31623330 (-)
G54599 NA non-coding downstream 854024 31491556 ~ 31527860 (-)
G54684 NA non-coding upstream 16963 32409506 ~ 32409852 (-)
G54724 NA non-coding upstream 204029 32596572 ~ 32597493 (-)
G54731 NA non-coding upstream 282722 32675265 ~ 32675465 (-)
G54733 NA non-coding upstream 289619 32682162 ~ 32682516 (-)
G54734 NA non-coding upstream 290817 32683360 ~ 32686614 (-)
LOC120558955 LOC104919264,LOC102777709,LOC100695043,LOC102209489,LOC103373809,LOC103152775,LOC101470785,LOC106963186 other downstream 58609 32292942 ~ 32323275 (-)
tafa5l LOC102786421,LOC104919510,LOC100700110,LOC103384901,LOC106518908,LOC107086703 other downstream 2309185 29971196 ~ 30072699 (-)
cdk11b LOC103366252,LOC101466870,LOC100697195 other downstream 2616011 29752661 ~ 29765873 (-)
clcnk clcnka,LOC104952128,LOC102786725 other downstream 2888909 29474503 ~ 29492975 (-)
LOC120559896 slc25a45 other downstream 3026000 29350078 ~ 29355884 (-)
LOC120559593 plxnb1,LOC103373813,LOC107100289 other upstream 198440 32590983 ~ 32666459 (-)
G54756 LOC107088573,LOC106566972 other upstream 374814 32767357 ~ 32773486 (-)
G54834 NA other upstream 487650 32880193 ~ 32887290 (-)
zgc:158296 NA other upstream 574092 32966635 ~ 32971163 (-)
lamb2 NA other upstream 1163257 33555800 ~ 33614940 (-)

Expression


Co-expression Network