srpk1a (srpk1)


Basic Information

Item Value
gene id srpk1a
gene name srpk1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 22611970 ~ 22627159 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801068.1
CTATGGCTCCCCCCTTAAGCAAAACGAACCAGTGCGCATGCGTGGAACATTCGATCACTGGTAGTGTAGCTAACGGCTAAGCTACGAATCCAGCCAACATGGAAAGAAAAGTTCTTGCACTCCAGGCGAGGAAGAAGAGGGGGAAAGCAAAGAAGACCAGCaaaaaGCAGCCAGTCAATCCCAGAGCTCGACAGCATCCCCAACAAGAAGCCTCGCCTCAGGAACCCGAGGAACCTGAGGAGATCCTCGGCTCTGATGATGAGGAGCAGGAGGACCCCAACGACTACTGCAAAGGTGGCTACCACCATGTGAAAGTAGGAGACCTTTACAACGGAAAATACCATGTAATCCGGAAACTGGGCTGGGGACACTTCTCCACGGTGTGGCTCGCCTGGGACATCCAGGTGAAGaggtttgttgcaatgaaggtGGTAAAGAGTGCGGAGCACTACACAGAGACAGCAGTGGATGAGATCAAACTCCTCAGATCTGTTAGAAACTCAGATCCCACTGATCCCAACCGCGAGATGGTGGTCCAGATGTTAGACGACTTCAAGATCTCTGGTATCAATGGAACCCATGTCTGCATGGTGTTTGAGGTGTTGGGGCATCACTTATTAAAGTGGATAATAAAGTCCAATTACCAAGGGCTGCCCCTTTCCTGTGTGAAGAGCATCATTAGACAGGTACTCCAAGGCCTGGACTACCTGCACACAAAGTGTCAGATCATCCACACAGACATCAAGCCAGAGAATATCCTGATGAGTGTTGATGAGCCTTATGTCCGGAAACTTGCAGCTGAAGCCACAGAGTGGCAGAGGGCTGGTGCGCCTCCTCCCTCTGGTTCAGCAATAAGCACAGCGCCTGCTCCAAAACAGACAGTAAAAATGTccaagaacaagaagaagaagttaaaaaagaagcagaagcGGCAGGCTGAGCTGCTGGAAAAGTGCATCCTGGACCTGGAGGAGATGGAAAAGACCACCGAGACACGagaggatgaagaggatgaAGATGAGGACCCGCAGTCTCCAAAGGGACGGGCCTGCGCTCCTCTCAGACCAGTGTCTATTCTGGAGCTAGAAAATGAGGGAACAGAAGAGAGCAGTGTGAATGCAGATCTCATGAGGGTGGGACCAGAGGGGCTGTTGGAGGTTAACTGTAATGGCCATGTGGAGGCAGACCAGAGGCAGTCCCAGTGGAGGGACGAGGACCAACACAATGGCAACGCAGGGCACACAGAGAAATGTGACAGTCAGGAGGGGCAACACGAGGAGTCCCCTGTTCACCTCCTCTGCAACGGTGTGGACACTGAGACTGAAGGCAGGGGTGCTCACAGCAGTGGAGTAACTGAGACACATCTTCCTCCTGGGCTGGAGGAGGGAGAGCTGGAGCAGGAGGATGGTGAGGACTGGCCCGAAAGCCTGGACGGCAAGCTAACAGCAGGATCCCTGCTAGTTAACCCCCTTGAGCCACTCAATTCAGACAAGATCAAGGTCAAGATTGCAGACTTGGGAAATGCCTGCTGGGTGCACAAGCACTTTACAGAAGACATCCAGACACGACAGTACAGGTCCTTAGAGGTGCTCATTGGTGCTGGATACAGCACACCGGCCGATGTATGGAGCACAGCCTGCATGGCCTTTGAGCTCGCCACAGGGGACTACTTATTTGAACCACATTCTGGGGAAGATTATTCCAGGGATGAAGACCATCTTGCTCTCATGATTGAGTTGCTCGGTAAAATCCCTCGCCACTATGCTCTGAGTGGGAAATACTCACAGGAATACTTCACCAAGAGAGGTGATTTGAAACACATCACCAAGCTGAAGCCATGGGGCCTGCTGGAGGTGCTGATTGACAAGTACGAGTGGCCCCGTGAAGAAGCCGAGTGCTTTTCTGACTTCCTGCTTCCCATGCTGGACCTGGTCCCAGAGAAGAGAGCCACAGCCGCAGAGTGCTTGCGTCACCCATGGCTCACCCTCTAGTGGAGACTTTCAACCATTGCACCTCCCTTCCTTCCCACTCTCTTCAGAGACTGCAACAGATCACTTTCCAGTTCGGGCATATCAGATgaatatttatttctctttttttgtttcgtttttgtttcttgtgttcttcTTATTGAACTAATGCTTCTGTGTATGTTTGCTTcgtatttgttgctttttctctcCGTGTGATGACGTTAGAAATCCAATGGATTACATTACTTTGTGGGCATGTTGGCTCGAACCTGCTGTGCTTCATTCACCCACCAAACTAAGCAAACCTGTACTGCTAGTGACTCTTCCTTGTTTGTTACACTCCTGCACTAAAACCCAAACAAATTAAGGATATGTAGCCTTTCTTGGTCATTTTGTTCCCTTTAGAAGGATTCGCTATCACTTCTTCTCTTGTGCATTTTCATTagtgctgtgttgttttttttaatgaattattttATCTTATGTTACACATGTAAggtatattttgtatttgtaaaGTAGGCTTAGGAAGTTGCACACTGGGCTGATATTTACACTGACTCTGGTAATGTTAACAGCAATTTCTTACTGAGACATCCACTGTCTGATAATTTAGGTCATATTATTTAGTCATAACAAATCCGTTGTCACCTGGTACTTAGTGTGgttaattaattataataaatgAGATCTTTCATTCTCATGGGAGTCTGGTATTCTCATACAACTATAACAATTCAGGAATATAGTGTTTTAAAGGTTTCAGCAAGACCACATGTTAAGAAGCCCAATTTAAGgagaaaaagtgaaaataaactGTATATATCTGTACCAAAGAGTTTGCCTTTATGTATATTACAGTTATGTACAGTTTTTAACAAATCTTATATCTTCGCTAAGATTATTTAGCTGGATAGCTGTGTTTTAATAAAGCGTATGGAAGATGTGTTCGAGCTCAGTTGTATGTATTGCCATCTGTTCAATAATGTCTCTGTTTTTACCATAGAACTGGTGAGATCTGATGTTATGCAATGGTGTCCCAAATTGATCATATCAAAGTAAAGTATCTATTGAGCCTAGGTAAAAACAAAATTTACATCGGTGTCAGATTTAAGAAAATAGACTTTGTGTAAGTTGTCGATTTACGGAACTGTACAACACCatacaataaaaacagatgTTCATACAATACAAA
>XM_039801069.1
CTATGGCTCCCCCCTTAAGCAAAACGAACCAGTGCGCATGCGTGGAACATTCGATCACTGGTAGTGTAGCTAACGGCTAAGCTACGAATCCAGCCAACATGGAAAGAAAAGTTCTTGCACTCCAGGCGAGGAAGAAGAGGGGGAAAGCAAAGAAGACCAGCaaaaaGCAGCCAGTCAATCCCAGAGCTCGACAGCATCCCCAACAAGAAGCCTCGCCTCAGGAACCCGAGGAACCTGAGGAGATCCTCGGCTCTGATGATGAGGAGCAGGAGGACCCCAACGACTACTGCAAAGGTGGCTACCACCATGTGAAAGTAGGAGACCTTTACAACGGAAAATACCATGTAATCCGGAAACTGGGCTGGGGACACTTCTCCACGGTGTGGCTCGCCTGGGACATCCAGGTGAAGaggtttgttgcaatgaaggtGGTAAAGAGTGCGGAGCACTACACAGAGACAGCAGTGGATGAGATCAAACTCCTCAGATCTGTTAGAAACTCAGATCCCACTGATCCCAACCGCGAGATGGTGGTCCAGATGTTAGACGACTTCAAGATCTCTGGTATCAATGGAACCCATGTCTGCATGGTGTTTGAGGTGTTGGGGCATCACTTATTAAAGTGGATAATAAAGTCCAATTACCAAGGGCTGCCCCTTTCCTGTGTGAAGAGCATCATTAGACAGGTACTCCAAGGCCTGGACTACCTGCACACAAAGTGTCAGATCATCCACACAGACATCAAGCCAGAGAATATCCTGATGAGTGTTGATGAGCCTTATGTCCGGAAACTTGCAGCTGAAGCCACAGAGTGGCAGAGGGCTGGTGCGCCTCCTCCCTCTGGTTCAGCAATAAGCACAGCGCCTGCTCCAAAACAGACAGTAAAAATGTccaagaacaagaagaagaagttaaaaaagaagcagaagcGGCAGGCTGAGCTGCTGGAAAAGTGCATCCTGGACCTGGAGGAGATGGAAAAGACCACCGAGACACGagaggatgaagaggatgaAGATGAGGACCCGCAGTCTCCAAAGGGACGGGCCTGCGCTCCTCTCAGACCAGTGTCTATTCTGGAGCTAGAAAATGAGGGAACAGAAGAGAGCAGTGTGAATGCAGATCTCATGAGGGTGGGACCAGAGGGGCTGTTGGAGGTTAACTGTAATGGCCATGTGGAGGCAGACCAGAGGCAGTCCCAGTGGAGGGACGAGGACCAACACAATGGCAACGCAGGGCACACAGAGAAATGTGACAGTCAGGAGGGGCAACACGAGGAGTCCCCTGTTCACCTCCTCTGCAACGGTGTGGACACTGAGACTGAAGGCAGGGGTGCTCACAGCAGTGGAGTAACTGAGACACATCTTCCTCCTGGGCTGGAGGAGGGAGAGCTGGAGCAGGAGGATGGTGAGGACTGGCCCGAAAGCCTGGACGGCAAGCTAACAGCAGGATCCCTGCTAGTTAACCCCCTTGAGCCACTCAATTCAGACAAGATCAAGGTCAAGATTGCAGACTTGGGAAATGCCTGCTGGGTGCACAAGCACTTTACAGAAGACATCCAGACACGACAGTACAGGTCCTTAGAGGTGCTCATTGGTGCTGGATACAGCACACCGGCCGATGTATGGAGCACAGCCTGCATGGCCTTTGAGCTCGCCACAGGGGACTACTTATTTGAACCACATTCTGGGGAAGATTATTCCAGGGATGAAGACCATATAGCGCTGATCATTGAACTGCTGGGGAGTGTCCCACGCAAACTCATAATGACTGGCAAATATTCCAAGGATTTTTTCACCAAGAAAGGTGATTTGAAACACATCACCAAGCTGAAGCCATGGGGCCTGCTGGAGGTGCTGATTGACAAGTACGAGTGGCCCCGTGAAGAAGCCGAGTGCTTTTCTGACTTCCTGCTTCCCATGCTGGACCTGGTCCCAGAGAAGAGAGCCACAGCCGCAGAGTGCTTGCGTCACCCATGGCTCACCCTCTAGTGGAGACTTTCAACCATTGCACCTCCCTTCCTTCCCACTCTCTTCAGAGACTGCAACAGATCACTTTCCAGTTCGGGCATATCAGATgaatatttatttctctttttttgtttcgtttttgtttcttgtgttcttcTTATTGAACTAATGCTTCTGTGTATGTTTGCTTcgtatttgttgctttttctctcCGTGTGATGACGTTAGAAATCCAATGGATTACATTACTTTGTGGGCATGTTGGCTCGAACCTGCTGTGCTTCATTCACCCACCAAACTAAGCAAACCTGTACTGCTAGTGACTCTTCCTTGTTTGTTACACTCCTGCACTAAAACCCAAACAAATTAAGGATATGTAGCCTTTCTTGGTCATTTTGTTCCCTTTAGAAGGATTCGCTATCACTTCTTCTCTTGTGCATTTTCATTagtgctgtgttgttttttttaatgaattattttATCTTATGTTACACATGTAAggtatattttgtatttgtaaaGTAGGCTTAGGAAGTTGCACACTGGGCTGATATTTACACTGACTCTGGTAATGTTAACAGCAATTTCTTACTGAGACATCCACTGTCTGATAATTTAGGTCATATTATTTAGTCATAACAAATCCGTTGTCACCTGGTACTTAGTGTGgttaattaattataataaatgAGATCTTTCATTCTCATGGGAGTCTGGTATTCTCATACAACTATAACAATTCAGGAATATAGTGTTTTAAAGGTTTCAGCAAGACCACATGTTAAGAAGCCCAATTTAAGgagaaaaagtgaaaataaactGTATATATCTGTACCAAAGAGTTTGCCTTTATGTATATTACAGTTATGTACAGTTTTTAACAAATCTTATATCTTCGCTAAGATTATTTAGCTGGATAGCTGTGTTTTAATAAAGCGTATGGAAGATGTGTTCGAGCTCAGTTGTATGTATTGCCATCTGTTCAATAATGTCTCTGTTTTTACCATAGAACTGGTGAGATCTGATGTTATGCAATGGTGTCCCAAATTGATCATATCAAAGTAAAGTATCTATTGAGCCTAGGTAAAAACAAAATTTACATCGGTGTCAGATTTAAGAAAATAGACTTTGTGTAAGTTGTCGATTTACGGAACTGTACAACACCatacaataaaaacagatgTTCATACAATACAAA
>XM_039801070.1
CTATGGCTCCCCCCTTAAGCAAAACGAACCAGTGCGCATGCGTGGAACATTCGATCACTGGTAGTGTAGCTAACGGCTAAGCTACGAATCCAGCCAACATGGAAAGAAAAGTTCTTGCACTCCAGGCGAGGAAGAAGAGGGGGAAAGCAAAGAAGACCAGCaaaaaGCAGCCAGTCAATCCCAGAGCTCGACAGCATCCCCAACAAGAAGCCTCGCCTCAGGAACCCGAGGAACCTGAGGAGATCCTCGGCTCTGATGATGAGGAGCAGGAGGACCCCAACGACTACTGCAAAGGTGGCTACCACCATGTGAAAGTAGGAGACCTTTACAACGGAAAATACCATGTAATCCGGAAACTGGGCTGGGGACACTTCTCCACGGTGTGGCTCGCCTGGGACATCCAGGTGAAGaggtttgttgcaatgaaggtGGTAAAGAGTGCGGAGCACTACACAGAGACAGCAGTGGATGAGATCAAACTCCTCAGATCTGTTAGAAACTCAGATCCCACTGATCCCAACCGCGAGATGGTGGTCCAGATGTTAGACGACTTCAAGATCTCTGGTATCAATGGAACCCATGTCTGCATGGTGTTTGAGGTGTTGGGGCATCACTTATTAAAGTGGATAATAAAGTCCAATTACCAAGGGCTGCCCCTTTCCTGTGTGAAGAGCATCATTAGACAGGTACTCCAAGGCCTGGACTACCTGCACACAAAGTGTCAGATCATCCACACAGACATCAAGCCAGAGAATATCCTGATGAGTGTTGATGAGCCTTATGTCCGGAAACTTGCAGCTGAAGCCACAGAGTGGCAGAGGGCTGGTGCGCCTCCTCCCTCTGGTTCAGCAATAAGCACAGCGCCTGCTCCAAAACAGACAGTAAAAATGTccaagaacaagaagaagaagttaaaaaagaagcagaagcGGCAGGCTGAGCTGCTGGAAAAGTGCATCCTGGACCTGGAGGAGATGGAAAAGACCACCGAGACACGagaggatgaagaggatgaAGATGAGGACCCGCAGTCTCCAAAGGGACGGGCCTGCGCTCCTCTCAGACCAGTGTCTATTCTGGAGCTAGAAAATGAGGGAACAGAAGAGAGCAGTGTGAATGCAGATCTCATGAGGGTGGGACCAGAGGGGCTGTTGGAGGTTAACTGTAATGGCCATGTGGAGGCAGACCAGAGGCAGTCCCAGTGGAGGGACGAGGACCAACACAATGGCAACGCAGGGCACACAGAGAAATGTGACAGTCAGGAGGGGCAACACGAGGAGTCCCCTGTTCACCTCCTCTGCAACGGTGTGGACACTGAGACTGAAGGCAGGGGTGCTCACAGCAGTGGAGTAACTGAGACACATCTTCCTCCTGGGCTGGAGGAGGGAGAGCTGGAGCAGGAGGATGGCAAGCTAACAGCAGGATCCCTGCTAGTTAACCCCCTTGAGCCACTCAATTCAGACAAGATCAAGGTCAAGATTGCAGACTTGGGAAATGCCTGCTGGGTGCACAAGCACTTTACAGAAGACATCCAGACACGACAGTACAGGTCCTTAGAGGTGCTCATTGGTGCTGGATACAGCACACCGGCCGATGTATGGAGCACAGCCTGCATGGCCTTTGAGCTCGCCACAGGGGACTACTTATTTGAACCACATTCTGGGGAAGATTATTCCAGGGATGAAGACCATCTTGCTCTCATGATTGAGTTGCTCGGTAAAATCCCTCGCCACTATGCTCTGAGTGGGAAATACTCACAGGAATACTTCACCAAGAGAGGTGATTTGAAACACATCACCAAGCTGAAGCCATGGGGCCTGCTGGAGGTGCTGATTGACAAGTACGAGTGGCCCCGTGAAGAAGCCGAGTGCTTTTCTGACTTCCTGCTTCCCATGCTGGACCTGGTCCCAGAGAAGAGAGCCACAGCCGCAGAGTGCTTGCGTCACCCATGGCTCACCCTCTAGTGGAGACTTTCAACCATTGCACCTCCCTTCCTTCCCACTCTCTTCAGAGACTGCAACAGATCACTTTCCAGTTCGGGCATATCAGATgaatatttatttctctttttttgtttcgtttttgtttcttgtgttcttcTTATTGAACTAATGCTTCTGTGTATGTTTGCTTcgtatttgttgctttttctctcCGTGTGATGACGTTAGAAATCCAATGGATTACATTACTTTGTGGGCATGTTGGCTCGAACCTGCTGTGCTTCATTCACCCACCAAACTAAGCAAACCTGTACTGCTAGTGACTCTTCCTTGTTTGTTACACTCCTGCACTAAAACCCAAACAAATTAAGGATATGTAGCCTTTCTTGGTCATTTTGTTCCCTTTAGAAGGATTCGCTATCACTTCTTCTCTTGTGCATTTTCATTagtgctgtgttgttttttttaatgaattattttATCTTATGTTACACATGTAAggtatattttgtatttgtaaaGTAGGCTTAGGAAGTTGCACACTGGGCTGATATTTACACTGACTCTGGTAATGTTAACAGCAATTTCTTACTGAGACATCCACTGTCTGATAATTTAGGTCATATTATTTAGTCATAACAAATCCGTTGTCACCTGGTACTTAGTGTGgttaattaattataataaatgAGATCTTTCATTCTCATGGGAGTCTGGTATTCTCATACAACTATAACAATTCAGGAATATAGTGTTTTAAAGGTTTCAGCAAGACCACATGTTAAGAAGCCCAATTTAAGgagaaaaagtgaaaataaactGTATATATCTGTACCAAAGAGTTTGCCTTTATGTATATTACAGTTATGTACAGTTTTTAACAAATCTTATATCTTCGCTAAGATTATTTAGCTGGATAGCTGTGTTTTAATAAAGCGTATGGAAGATGTGTTCGAGCTCAGTTGTATGTATTGCCATCTGTTCAATAATGTCTCTGTTTTTACCATAGAACTGGTGAGATCTGATGTTATGCAATGGTGTCCCAAATTGATCATATCAAAGTAAAGTATCTATTGAGCCTAGGTAAAAACAAAATTTACATCGGTGTCAGATTTAAGAAAATAGACTTTGTGTAAGTTGTCGATTTACGGAACTGTACAACACCatacaataaaaacagatgTTCATACAATACAAA

Function

symbol description
srpk1 Enables ATP binding activity; magnesium ion binding activity; and protein serine/threonine kinase activity. Involved in several processes, including protein phosphorylation; regulation of mRNA processing; and regulation of viral genome replication. Located in several cellular components, including chromatin; cytosol; and nuclear speck.

NR:

description
PREDICTED: SRSF protein kinase 1 isoform X3

GO: NA

KEGG:

id description
K15409 SRPK1; serine/threonine-protein kinase SRPK1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801068.1 True 3168 mRNA 0.46 16 22611970 22627159
XM_039801069.1 False 3168 mRNA 0.46 16 22611970 22627159
XM_039801070.1 False 3141 mRNA 0.46 16 22611970 22627159

Neighbor

gene id symbol gene type direction distance location
mapk14a LOC103368176,LOC104964410,LOC104939458 coding upstream 1174 22597224 ~ 22610796 (+)
elapor1 kiaa1324 coding upstream 15768 22585431 ~ 22596202 (+)
smc5 smc5 coding upstream 30385 22565944 ~ 22581585 (+)
LOC120558833 NA coding upstream 66130 22538280 ~ 22545840 (+)
rpl10a rpl10a,LOC103141192 coding upstream 73817 22535497 ~ 22538153 (+)
cpne5a NA coding downstream 26342 22653501 ~ 22725592 (+)
adora1b adora1,LOC103368126,LOC101166301,LOC102200284,LOC101484151 coding downstream 164506 22791665 ~ 22795982 (+)
mmp9 mmp9 coding downstream 179764 22806923 ~ 22811471 (+)
LOC120559125 NA coding downstream 184711 22811870 ~ 22823643 (+)
LOC120559530 LOC104964419,LOC104927136 coding downstream 199472 22826631 ~ 22828548 (+)
G52185 NA non-coding upstream 127869 22480543 ~ 22484101 (+)
G52179 NA non-coding upstream 135656 22474230 ~ 22476314 (+)
G52054 NA non-coding upstream 265324 22340383 ~ 22346646 (+)
G52064 NA non-coding upstream 356997 22254295 ~ 22254973 (+)
G52060 LOC104967533,LOC103368342 non-coding upstream 374788 22235156 ~ 22237182 (+)
G52272 lhfpl5,LOC102777996 non-coding downstream 3435 22630594 ~ 22631144 (+)
G52287 NA non-coding downstream 98714 22725873 ~ 22726131 (+)
G52288 NA non-coding downstream 99438 22726597 ~ 22729555 (+)
G52294 NA non-coding downstream 122904 22750063 ~ 22762554 (+)
G52333 NA non-coding downstream 207639 22834798 ~ 22847296 (+)
LOC120559933 NA other upstream 49449 22562154 ~ 22562521 (+)
G52210 LOC104964406,LOC106525460,LOC105931770 other upstream 51642 22556329 ~ 22560328 (+)
LOC120558641 LOC103363734,LOC104967523 other upstream 517080 22090197 ~ 22094890 (+)
avpr2aa avpr2,LOC105897269 other upstream 551325 22046763 ~ 22060645 (+)
G51926 NA other upstream 707893 21903542 ~ 21904077 (+)
lamtor5 lamtor5,LOC102787529 other downstream 214885 22842044 ~ 22846938 (+)
atxn7l2b kcnc4 other downstream 364093 22991252 ~ 23068479 (+)
tmem201 tmem201,LOC102777799 other downstream 1119206 23746365 ~ 23765165 (+)
ctnnbip1 ctnnbip1 other downstream 1164288 23791447 ~ 23814406 (+)
LOC120559118 LOC102791662 other downstream 2313636 24940795 ~ 24945320 (+)

Expression


Co-expression Network