LOC120559463


Basic Information

Item Value
gene id LOC120559463
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 25815356 ~ 25819330 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801164.1
ATGaaatattttctggtttctctgtgtctcctgGAAACATTTCTACATGTCTTGGCTCAATGTGTCCCAGCCTCAGAGTTTCAGCTGGAAGGAGATTATTTGTTAGGTGGACTTTTTAATGTTCATCATGATAGTGACCCTGTTTATCACGACAGACCAGAAGCCATCGACTGCTCCAGTGAAACTCTGGTCAATTCAAGTTATCGGAGGTTTCAGTTGATGAGATTCGCTGTAGAGGAAATCAATAACTCGACCACCCTCCTGCCAAATGTATCTCTCGGCTATGAGATATTTGACTACTGCTCAGATACCCGAACATTCCCAGGCATTTTCAAACTCATATCAGACGACAATGAGTTGATCCAACCTGGGGGTAAACTACACAAGAATCGGTCCAAAGTGATAGCAGTGGTCGGCGCCTCTACAAGCACGCAATCCCTGACTGTAGCCCCACTCTTCACAATGAATCTCCTTCCTATGGTCAGTTATGGATCTGCAAGTTCTGTCTTTTCAAAAAAACAGAATTTCCCCTCTTTCCTACGAACATTGCCTCCCAATCAAGTCACCATAGAAGTGATTGTTAATATTCTTCAGCACTACAACTGGCGCTGGGTTGCTTTCCTTTACATTGATGATGATTTTGGCAAAGATGGACAGGAATTGTTCATAAAGAGAATTAAGGACACTGAGATCTGCCTGGCATACACCCAAGGCCTCAATCAATATACAGATTACTCCCAAATATTCAAACAGATAGAAGCACAGAGGATAGGTATCATTATTGTTTTTGCTCCTGAATGGGCTGCTCAACCTCTCCTTATGTCAGCAATACAACTAAATGTCACCAATAAAGTGTGGATAGCAGTGAATACATGGTCGTTAAACAAGAAGCTCCCCAAGGAGAAAGGAATCAAAAATATTGGAACTGTAATTGGGTTTTCTGAGATAGCACTGACAATACCTGGTTTCAgtgattttatttattcttccaGAAGCCTGACTCATTGTGAAAATgcagaactttttttttgtaatcagGCGTACAACTGCAGCAGCCCAAGTGCAGAAGATGTCATAGCTGCTGAGCCAACTTttaatttttatgtttattctgCTGTATATGCCATCGCTCATGCCTTACACAATGCCTTGCAATGTGGATCTGCCAGATGTAATCGCAATATTACAGTGTACCCACGCATGGTTCTAACAGAGCTGAAGAAGTCAAACTTCACAATTTTAAATCAGAGGATTCGGTTTGATGAGAATGGTGACCCCAACTACGGATCATTTTCTATAATTTTCTGGAACCAAAGTGGTGATGCAGAGGTGATCGGCTTTCATAATTTACACCCACCGTTCCATTTCTTCATCAACGACAGCAAAATGCAGTGGTACACAGAGGGAGAaGCGCCTACTTTACCGTGTTCCCCAGAATGTCGTAGAGGATATGCAAAAAAGTATAATGGAATCCACAAATGCTGCTTCGATTGTGAAATGTGTCCAAATGGAACTTATGTCAACAGCACAGAGGATCCCTACAAGTGCATCAACTGTAAGGAGACAGAATGGTCAGCAGCAGGAAGTACATCATGCAATCTGCGGGTGGTGGAGTACATCCCATTCACAGACAGTGGGGCTATACTGATCATGGTCGGGGCCTCGGCATTGGTGGGCCTCACATTAGCCACGTCTGTTCTCTTTGCCATCAACTACAACACACCTGTTGTCAGATCTGCTGGGGGACCAATGTGCTTCCTGATTTTAGGCTGCCTCAGCCTGTGTTGTCTTAGTATATTCTTTTACTTTGGTAAGCCAACAATTTCCTTTTGTATCTTAAGATTCTTACCGTTTCTCTTGTTCTACACTGTTTGTCTAGCATGTTTTGTTGTGCGCTCGTTTCAAATTGTTTGCATTTTCAAAATGGCCGCCAAGTTCCCCAAGCTTCACAGTTGGTGGATGAAATATCATGGACAATGGCTGGTCATCACTGTGGCATTTGTTACTCAGGCACTCTTTCTTCTTATTGGCTATACTTATTCTCCCCCCAAGCCTTACGATGACATTTCTTGGTACCCAGACAAAATCATACTTGTTTGTGATATTAATCTCAAAGCATCCTCTGGTTCTGTGGTTTTACTTTTATCTTTGGGCTCCCTTTGCTTTATTTTCTCCTACATGGGAAAAGACCTCCCAAAAAATTACAATGAGGCCAAAGCAATAACCTTCTGCCTGCTCCTGCTGATCCTCACCTGGATCATGTTTGCCACTGTATACATTCTGTACCGTGGCAAGTACATCCAAACTCTTAACGCTCTGGCAGTTCTCTCCAGTCTCTATTCCTTTCTGTTGTGGTATTTCTTcccaaaatgttttattatcatttttCAATCGTACAAAAACACGCAGGAGTACTTCCAAGGTCTCATTCAGAATTATACCAAAACAATCAGCCAGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801164.1 True 2460 mRNA 0.42 6 25815356 25819330

Neighbor

gene id symbol gene type direction distance location
rer1 rer1 coding upstream 9195 25794731 ~ 25806161 (+)
tp73 tp73,LOC102784606 coding upstream 22131 25765160 ~ 25793225 (+)
prdm16 prdm16,LOC102785463 coding upstream 100966 25532101 ~ 25714390 (+)
LOC120558819 NA coding upstream 371516 25440361 ~ 25443840 (+)
tmem51a NA coding upstream 389419 25422882 ~ 25425937 (+)
LOC120559218 NA coding downstream 4438 25823768 ~ 25829902 (+)
LOC120559220 NA coding downstream 15216 25834546 ~ 25840432 (+)
LOC120559217 LOC103362599 coding downstream 34404 25853734 ~ 25857881 (+)
her3 NA coding downstream 47433 25866763 ~ 25867978 (+)
espn espn coding downstream 181962 26001292 ~ 26050486 (+)
G53056 NA non-coding upstream 4309 25809713 ~ 25811047 (+)
LOC120558677 NA non-coding upstream 799958 25009989 ~ 25015398 (+)
G52892 NA non-coding upstream 855253 24959816 ~ 24960103 (+)
G52827 LOC107550338,LOC103365918,LOC107551495,LOC104947949 non-coding upstream 1062176 24751895 ~ 24753180 (+)
G52817 NA non-coding upstream 1109450 24705538 ~ 24705906 (+)
LOC120559215 NA non-coding downstream 175903 25995233 ~ 25997094 (+)
G53109 NA non-coding downstream 277029 26096359 ~ 26099635 (+)
G53221 NA non-coding downstream 505891 26325221 ~ 26325468 (+)
G53222 NA non-coding downstream 506589 26325919 ~ 26329616 (+)
G53223 LOC103362778,LOC108236819,LOC101165391 non-coding downstream 510754 26330084 ~ 26330628 (+)
tprg1l tprg1l,LOC102784883,LOC106513028 other upstream 67035 25743589 ~ 25748321 (+)
G52871 LOC104956590 other upstream 858026 24953442 ~ 24957330 (+)
LOC120559118 LOC102791662 other upstream 870036 24940795 ~ 24945320 (+)
ctnnbip1 ctnnbip1 other upstream 2000950 23791447 ~ 23814406 (+)
tmem201 tmem201,LOC102777799 other upstream 2050191 23746365 ~ 23765165 (+)
G53096 ybx1 other downstream 252255 26071585 ~ 26076664 (+)
G53232 LOC104966952,LOC103362776,LOC102800046,LOC102208894 other downstream 533130 26352460 ~ 26353463 (+)
LOC120559113 LOC108236696,LOC104966950,LOC103362773,LOC103384494 other downstream 558862 26378192 ~ 26383047 (+)
atp5f1e NA other downstream 623720 26443050 ~ 26444890 (+)
LOC120559571 vapb,LOC100711919,LOC102796136,LOC101481364 other downstream 664202 26483532 ~ 26537351 (+)

Expression


Co-expression Network