zgc:154075 (LOC104945171,LOC101464044,LOC102304528,LOC100692795,LOC102780086,LOC103362596)


Basic Information

Item Value
gene id zgc:154075
gene name LOC104945171,LOC101464044,LOC102304528,LOC100692795,LOC102780086,LOC103362596
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 26102648 ~ 26109344 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801279.1
GTTCGAAGAAGTGAACCACCCTGCTGCTGTCATAGGCTGctgcgttctcttaatacatccatgggctgCTGTCGAGTCAACCAAACGCTCACTGGACTCCGATGTAGACGTCTCGTGACTAAATAAGACCAACGCGGAAGACACACACAAGGTTTTGACAGCTGGATGACTGTAAAAGTAATATATACAGTCATTGTATGGGACAAAACAGTTTACAGGGTGCCAGAATGACTTCCCCTGTCCGTGTCGTCGTGGTGGGAGCTGGCAGTCGAGGGGAGATCTACTCCCAGTATGCATCTGTCCACCCTGATCGCGTTAAGGTTGTTGGAGTAGCTGATCCAAGGAAATTTGCTCGCACTAAACTTCAACAGCAACACAAAATTGTAGATGAAAACATATTTGAAGACTGGCACAGTATAGTTGAAAGAGAGAGGTTTGCAGATGCAGTGCTAATTTGTACTCCAGACCGCCTTCATAAGGAACCTGCGGTGGCCTTTGCAAAGAAGGGCTACCACATTCTGCTGGAGAAACCAATGGCAACAACTGTTGAAGACTGCACGGCGATTGTGGAGGCTTGCACTCAGAGTGGCGTGATGCTATCAGTGGGTCATGTTCTTCGGTATGATCCCGTCATCCACAAGATAAAGGAGCTGATAGATGCTAGAGTCATAGGCGATGTGATGCACATTCAGCACTTTGAGCCGGTTGGATTTTACCACTTTGCTCACTCATTTGTTCGGGGGAACTGGAGGAATGAAGCAGAGAGCTCTTTTGCTCTTTTGGCTAAATCGTGCCACGACATCGACCTAATACATCACTGGGCTGGACCACGCAGGTGTGTGAAAGTGTCATCATTTGGATCTGTCAGCCACTTCGGAAAAGAAAACAAGCCAACAGGTGCTGGAAATCGCTGCCTGGATTGTTCAGTAGAAAAAAACTGTCCATACTCAGCATGCAAAATCTACCTGGATAGAGTAAAACAGGGTCACACTGGCTGGCCTGTATCAGTCATATGTCCGAGCTCGTTCCCAGACATCGAATCAGTAACTGAGGCCCTGAGGACTGGACCATATGGCCGCTGTGTCTACGAGTGTGACAATGATGTCTGCAGTAACCAGGTTGTTAACATGGAGTTTGAAGGGGGTCTGACGGCAGCCTTTTCCATGGTGGCGTTCACCGAGGAGCTGTGCAAGCGAAAAACAACCATCTATGGCAGCAAGGGGGAGCTGTCATGTGACAGCCATGAGATACGCGTGTTTGACTTTCTGACCCAAAGATCCACAAAGCACACGGCACACAATGACGCCCCCAGGCAGTTTGGCATGAGTGGACACGGTGGAGCAGACTACTACCTTATGGATGCCTTTATTTCTGCTGTGGCAcaaaaCGATCCATCCCTGATCCGTGCAGGTCCTAAGGAGACGCTGCTGAGCCATTTGCTGGTGTTTGAAGCTGAGCGTTCGCGACTGGAGAGCAGGGTGGTACACTGTGGTAACACTGGCCAGAGCTAGACACGACATGACATTAAACCAATCTCACCTTAAAAATCAAACACTATAATGAAATGGACAATGAAACTCCTCTTGCTTCTGCTATCAACTGAACTCAGGGCAAAATTGTGTAATGAGGCTGATTGTTTAGTTCATATTGTTCAgggaagtgtgtgtatgtgtgtgtctgttaagtTAAAATTAAAGTATTTAGTAATGTTTTTTGATAGAGTAGTGTCCATGTAAAATATTCTCATAATTTCTAGTAAAAACTGTGTAATTTAAA
>XM_039801280.1
GTTCGAAGAAGTGAACCACCCTGCTGCTGTCATAGGCTGctgcgttctcttaatacatccatgggctgCTGTCGAGTCAACCAAACGCTCACTGGACTCCGATGTAGACGTCTCGTGACTAAATAAGACCAACGCGGAAGACACACACAAGGTTTTGACAGCTGGATGACTGTAAAAGTAATATATACAGTCATTGTATGGGACAAAACAGGGTGCCAGAATGACTTCCCCTGTCCGTGTCGTCGTGGTGGGAGCTGGCAGTCGAGGGGAGATCTACTCCCAGTATGCATCTGTCCACCCTGATCGCGTTAAGGTTGTTGGAGTAGCTGATCCAAGGAAATTTGCTCGCACTAAACTTCAACAGCAACACAAAATTGTAGATGAAAACATATTTGAAGACTGGCACAGTATAGTTGAAAGAGAGAGGTTTGCAGATGCAGTGCTAATTTGTACTCCAGACCGCCTTCATAAGGAACCTGCGGTGGCCTTTGCAAAGAAGGGCTACCACATTCTGCTGGAGAAACCAATGGCAACAACTGTTGAAGACTGCACGGCGATTGTGGAGGCTTGCACTCAGAGTGGCGTGATGCTATCAGTGGGTCATGTTCTTCGGTATGATCCCGTCATCCACAAGATAAAGGAGCTGATAGATGCTAGAGTCATAGGCGATGTGATGCACATTCAGCACTTTGAGCCGGTTGGATTTTACCACTTTGCTCACTCATTTGTTCGGGGGAACTGGAGGAATGAAGCAGAGAGCTCTTTTGCTCTTTTGGCTAAATCGTGCCACGACATCGACCTAATACATCACTGGGCTGGACCACGCAGGTGTGTGAAAGTGTCATCATTTGGATCTGTCAGCCACTTCGGAAAAGAAAACAAGCCAACAGGTGCTGGAAATCGCTGCCTGGATTGTTCAGTAGAAAAAAACTGTCCATACTCAGCATGCAAAATCTACCTGGATAGAGTAAAACAGGGTCACACTGGCTGGCCTGTATCAGTCATATGTCCGAGCTCGTTCCCAGACATCGAATCAGTAACTGAGGCCCTGAGGACTGGACCATATGGCCGCTGTGTCTACGAGTGTGACAATGATGTCTGCAGTAACCAGGTTGTTAACATGGAGTTTGAAGGGGGTCTGACGGCAGCCTTTTCCATGGTGGCGTTCACCGAGGAGCTGTGCAAGCGAAAAACAACCATCTATGGCAGCAAGGGGGAGCTGTCATGTGACAGCCATGAGATACGCGTGTTTGACTTTCTGACCCAAAGATCCACAAAGCACACGGCACACAATGACGCCCCCAGGCAGTTTGGCATGAGTGGACACGGTGGAGCAGACTACTACCTTATGGATGCCTTTATTTCTGCTGTGGCAcaaaaCGATCCATCCCTGATCCGTGCAGGTCCTAAGGAGACGCTGCTGAGCCATTTGCTGGTGTTTGAAGCTGAGCGTTCGCGACTGGAGAGCAGGGTGGTACACTGTGGTAACACTGGCCAGAGCTAGACACGACATGACATTAAACCAATCTCACCTTAAAAATCAAACACTATAATGAAATGGACAATGAAACTCCTCTTGCTTCTGCTATCAACTGAACTCAGGGCAAAATTGTGTAATGAGGCTGATTGTTTAGTTCATATTGTTCAgggaagtgtgtgtatgtgtgtgtctgttaagtTAAAATTAAAGTATTTAGTAATGTTTTTTGATAGAGTAGTGTCCATGTAAAATATTCTCATAATTTCTAGTAAAAACTGTGTAATTTAAA

Function

NR:

description
uncharacterized protein LOC109907888 isoform X2

GO:

id name namespace
GO:0055114 oxidation-reduction process biological_process
GO:0016491 oxidoreductase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801279.1 True 1776 mRNA 0.47 14 26102648 26109344
XM_039801280.1 False 1769 mRNA 0.47 14 26102648 26109344

Neighbor

gene id symbol gene type direction distance location
si:dkeyp-100a1.6 NA coding upstream 16276 26084664 ~ 26086372 (+)
arhgef16 arhgef16 coding upstream 31450 26051537 ~ 26071198 (+)
espn espn coding upstream 52162 26001292 ~ 26050486 (+)
her3 NA coding upstream 234670 25866763 ~ 25867978 (+)
LOC120559217 LOC103362599 coding upstream 244767 25853734 ~ 25857881 (+)
LOC120559097 NA coding downstream 17973 26127317 ~ 26136177 (+)
ubr4 NA coding downstream 40006 26149350 ~ 26212156 (+)
LOC120558413 LOC103372574 coding downstream 107170 26216514 ~ 26218082 (+)
her12 LOC101486328 coding downstream 113151 26222495 ~ 26223843 (+)
rprd1b rprd1b coding downstream 127495 26236839 ~ 26247282 (+)
G53109 NA non-coding upstream 3013 26096359 ~ 26099635 (+)
LOC120559215 NA non-coding upstream 105554 25995233 ~ 25997094 (+)
G53056 NA non-coding upstream 291601 25809713 ~ 25811047 (+)
LOC120558677 NA non-coding upstream 1087250 25009989 ~ 25015398 (+)
G52892 NA non-coding upstream 1142545 24959816 ~ 24960103 (+)
G53221 NA non-coding downstream 215877 26325221 ~ 26325468 (+)
G53222 NA non-coding downstream 216575 26325919 ~ 26329616 (+)
G53223 LOC103362778,LOC108236819,LOC101165391 non-coding downstream 220740 26330084 ~ 26330628 (+)
G53239 NA non-coding downstream 255098 26364442 ~ 26364837 (+)
G53248 LOC101164642,LOC104966947,LOC100690915,LOC102195969,LOC104926428,LOC101062277 non-coding downstream 287855 26397199 ~ 26402428 (+)
G53096 ybx1 other upstream 25984 26071585 ~ 26076664 (+)
tprg1l tprg1l,LOC102784883,LOC106513028 other upstream 354327 25743589 ~ 25748321 (+)
G52871 LOC104956590 other upstream 1145318 24953442 ~ 24957330 (+)
LOC120559118 LOC102791662 other upstream 1157328 24940795 ~ 24945320 (+)
ctnnbip1 ctnnbip1 other upstream 2288242 23791447 ~ 23814406 (+)
G53232 LOC104966952,LOC103362776,LOC102800046,LOC102208894 other downstream 243116 26352460 ~ 26353463 (+)
LOC120559113 LOC108236696,LOC104966950,LOC103362773,LOC103384494 other downstream 268848 26378192 ~ 26383047 (+)
atp5f1e NA other downstream 333706 26443050 ~ 26444890 (+)
LOC120559571 vapb,LOC100711919,LOC102796136,LOC101481364 other downstream 374188 26483532 ~ 26537351 (+)
gnas gnas,LOC102796627,LOC104936173 other downstream 381098 26490442 ~ 26523888 (+)

Expression


Co-expression Network