LOC120559545


Basic Information

Item Value
gene id LOC120559545
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 32923850 ~ 32927539 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801313.1
CTTTAGTTCTTAAAGACAAGAGTTCTAAAAAGTCAATTCCAGTGACTCAATCAGAATCATTCTTCATTCTTAACACACTCAAGTTtatacgttaccatggcaatggtTTTGATTATGTAGtgttgacatttaaaaacaagtcAATTCCAGTGATTCAATCAAAATCATTCTTAATACACTCTTCAGCCTGAACACGTACTGTTCATTTGTGCTTGTTGAATTAACTGTGTTTGAGTATTCTCTACTCTCCAGTCTATTGTTAGAAATCGTTGGAAATTTTTCATTGTCACTTTGACAACAACCTACAAcctgacaacaacaacataccAATGGAGTTCGTTGAAGGAAGCAGAGGCATCTACAGACCCATCAGGGTGTTGTTCGACACAACCATATACGAGCGCGCTTTGCAGCTCTGCTGGCATGTGAAGTCTTACAAGACCAATATTGCATTGGTGATTGAACTTTTGAGGCTTCAGTGTGAAAGTAGTATCCCATCTAAGGTGAGTGTTGAAGATATGACAGACCTGCTGGTAGAGCAAAGCAAAGCTACGGTGAGAGTGCAGCTCTGGGAGTTTGAATTGGAGGACTTTGATGAGGAAGATGCCAAGCCTCTTCTCATGTTGGTTTGGGAGGTAATCAACAGcatgaaaatgagggacattgAGTTTGAAGCCAGAAGGCTACTCCAGTCGCCAGAAGACATCCCTCCTTGTTTTCAACATCCAAAGCTGGTTAATTTGGCTCAGGAGTATGGCAGGAGCCTGACACAGCAGCTGCAGTCGGCCCCCAGCTCCAAACTGCTTGGCCCAAGAGATGTGGTGATGGAGGTGCTACCAAAAGTCTTGCAGGGCTTCTGGTTACCTCCTCCAAGCACCTTCCTCAACATGCCCTCCCAGCAGCTCAGTGAAATGGCTGTTGGTGTCACAAAGTTTGTTTTGGACCGGGTCTCCACTGCTTTGTCCACTGTGCACCATCGGGTCAACTTCTCCCGGTCCATCAGAGACAGCATGGTCCTGTCTATCCAGGAAATGGTTAGGCAGATGTACCCTCAAGACGTCCTGAGGAGAGGGCTTAACTGCTTTGCAGCAGAGGTGCTGAACACTATTGTTGATGCTGCAGTGAAAGAGGTCCTTGTGCTGTTTCAGCCTCAGACTGATACTCCTGTGCCTGCAAATTCAAGCACCAAAAATGATTGCACCCAGCACCCCCAGGCTGGAGATTTGAATGAGGAGCCTGGTCTGGAGGAAGATGGTGAACCAATCCAAGATCCAGAATCTTCTGTTTTGTCTTCTCCACCCACTCCTCTGACTCCCAATGCTGAACCTGCTGCCAATATTTTCTTGGATGAAACGGTATCATCTGCCTCTGTGCTCTGCCTAGAAGCTGACTCTGCTGTGGTTCCAGCTCTGCCATCTTCTGTTCCCCCTACTGATGAACCTCTTGCCATCAATGTCAGTCAGGATGGTTTGACAATCAGCCAGATTGAACCAGCAGAGCAGTTTACCCCAGAGACGGATACAGAGGATTCTTCCTCTGCGCCCAGCCTAAAAGCTCCTGTGGCTACAGCTCATCCACCCCCTCCGACTCCTCCTGCTGAACCCACAGTGACTACATCAGCCCTGAATAGTGAGGACTTGAGTGAGAAGATGACCAGAGAACCAGACTCTGTTCTGGCTACAGTTCCAACACCTACCGTGACCCCTGCTGATGAACCTCCTACCAGCACTGTCAGTCAGGATGGTTTGATAATCAGCCAGATTGAACCAGCTGAGCAGCCTGCACCAAAGGCCGACTTTGCTACATCAGCCCTGAATAGTGAGGACTTGAGCGAGCAGATCACCAGAGAACCAGACTCTGTTGTGGCTACAGCTCCAACACCTACTGTGACCCCTGCTGATGAACCGCCTACCATCGCTGTTGTCCAGGATGGTTTGACAATCAGCCAGATTGAACCAGCTGAGCAGCCTGCACCAAAGGCCAACTTTGCTACATCAGCCCTGAATAGTGAGGACTTGAGCGAGCAGATCACCAGAGAACCAGACTCTGTTGTGGCTACAGCTCCAACACCTACTGTGACCCCTGCTGATGAACCGCCTACCATCGCTGTTGTCCAGGATGGTTTGACAATCAGCCAGATTGAACCAGCTGAGCAGCCTGCACCAAAGGCCGACTTTGCTACATCAGCCCTGAATAGTGAGGACTTGAGCGAGCAGATCACCAGAGAACCAGACTCTGTTGTGGCTACAGCTCCAACACCTACTGTGACCCCTGCTGATGAACCGCCTACCATTGCTGTTGTCCAGGATGGTTTGACAATCAGCCAGATTGAACCAGCTGAGCAGCCTGCACCGAAGGCCAACTTTGCTACATCAGCCCTGAATAGTGAGGACTTGAGTGAGAAGATGACCAGAGAACCAGACTCTGTTCTGGCTACAGCTCCAACACCTACCGTGACCCCTGCTGATGAACCGCCTACCATCGCTGTTGTCCAGGATGGTTTGACAATCAGCCAGATTGAACCAGCTGAGCAGCCTGCACCAAAGGCCAACTTTGCCACATCAGCCCTGAATAGTGAGGACTTGAGCGAGCAGATCACCAGAGAACCAGACTCTGTTGTGGCTAATGCTCCAACACCTATTGTGACCCCTGCTGATGAACCGCCTACCATCGCTGTTGTCCAGGATGGTTTGACAATCAGCCAGATTGAACCAGCTGAGCAGCCTGCACCAAAGGCCAACTTTGCTACATCAGCCCTGAATAGTGAGGACTTGAGCGAGCAGATCACCAGAGAACCAGACTCAGCTGTGACTGCGGCTCTACAGGCTCTTCCAATCACCCATGATGCAGCGCAGGATGACCTGACAATCAGCCAGGTTAAGGTTGAAAAGAAGAGCGGAGTCCAGCGCTTCTTCAGTTGGTTCAGGAAAACCCTATGCTGCTGTTGCCTGCCTGAAGACGCAGactgagggccagatgtactatcgcaaggggaaagtgggagtttcccataaagagctGAGTTTACACTTTACAACACCAACACATGCACCTATTTCACTCATGCACACCCTACACCACTGTCGCTACTGATTTCCACATCCCATTCTGTATATAGTTAATTTGGTAAgtattgtttaaacatttaacatggtATTGTCTTCCATCTTTGTTATGACCACCTGAGCCAGGTCATGAAAAGTGGGTGCTCGTTAAATTAAGTTATATTAGTAGTGgtgtgtttagtgttaattGGTTGGTCCAGCTAAAGGTTGATTTTAGCTGTGCTTCGCagggtttgtttttctttgtt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801313.1 True 3313 mRNA 0.49 2 32923850 32927539

Neighbor

gene id symbol gene type direction distance location
tmem106c tmem106c,LOC108233084 coding downstream 20137 32892265 ~ 32903713 (-)
krt8 LOC104959359,LOC106525573,LOC108233108,LOC107391340,LOC107088570,LOC100702817,LOC103152763 coding downstream 197223 32720833 ~ 32726627 (-)
LOC120558593 LOC106915442,LOC106565226,LOC103152765,LOC106947658 coding downstream 229408 32688887 ~ 32694442 (-)
si:ch211-220i18.4 LOC103373814,LOC108233036,LOC102211047,LOC100693975,LOC102782987,LOC102291816 coding downstream 336887 32570308 ~ 32586963 (-)
cpne9 cpne9,LOC100694516,LOC101469997,LOC102776939 coding downstream 412785 32413064 ~ 32511065 (-)
si:ch211-207e14.4 NA coding upstream 6928 32934467 ~ 32949982 (-)
fam50a fam50a coding upstream 22566 32950105 ~ 32965764 (-)
arhgap4b LOC103371877,LOC102798993,LOC102215860 coding upstream 45056 32972595 ~ 33014849 (-)
zgc:103759 LOC104952901,LOC101466673,LOC100706292,LOC102192048 coding upstream 88950 33016489 ~ 33021344 (-)
pim1 pim1,LOC102786254,LOC100704168,LOC102192917 coding upstream 141346 33068885 ~ 33073078 (-)
G54735 NA non-coding downstream 235212 32688205 ~ 32688638 (-)
G54734 NA non-coding downstream 237236 32683360 ~ 32686614 (-)
G54733 NA non-coding downstream 241334 32682162 ~ 32682516 (-)
G54731 NA non-coding downstream 248385 32675265 ~ 32675465 (-)
G54724 NA non-coding downstream 326357 32596572 ~ 32597493 (-)
LOC120558525 NA non-coding upstream 246327 33173866 ~ 33183318 (-)
LOC120558313 NA non-coding upstream 380592 33308131 ~ 33308924 (-)
G54922 NA non-coding upstream 391281 33318820 ~ 33319024 (-)
G54947 NA non-coding upstream 577274 33504813 ~ 33507223 (-)
G54949 NA non-coding upstream 579895 33507434 ~ 33508423 (-)
G54834 NA other downstream 36560 32880193 ~ 32887290 (-)
G54756 LOC107088573,LOC106566972 other downstream 150364 32767357 ~ 32773486 (-)
LOC120559593 plxnb1,LOC103373813,LOC107100289 other downstream 257391 32590983 ~ 32666459 (-)
LOC120558955 LOC104919264,LOC102777709,LOC100695043,LOC102209489,LOC103373809,LOC103152775,LOC101470785,LOC106963186 other downstream 600575 32292942 ~ 32323275 (-)
tafa5l LOC102786421,LOC104919510,LOC100700110,LOC103384901,LOC106518908,LOC107086703 other downstream 2851151 29971196 ~ 30072699 (-)
zgc:158296 NA other upstream 39096 32966635 ~ 32971163 (-)
lamb2 NA other upstream 628261 33555800 ~ 33614940 (-)
G55124 fam110a,LOC104960682 other upstream 1096479 34024018 ~ 34127495 (-)
G55131 NA other upstream 1160431 34087970 ~ 34093118 (-)
ntsr1 ntsr1,LOC103361890,LOC104959625 other upstream 1309027 34236566 ~ 34291069 (-)

Expression


Co-expression Network