LOC120559565


Basic Information

Item Value
gene id LOC120559565
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 26247997 ~ 26259954 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801389.1
TTCATTGTGAAATTGAGAAATCAGCCTGTAGTGGTTAGTTGTGTTTCGGGGATTACCTATACACAACCAACCACAACAGTAAACTTTGATTTTGATCTACTCAGATGGCTGTGCATAAAGCCGCCTATGATTGTTGAGGCAGAAGGCCGTCCACTAAAAGCCAGGGTCAGAGGTTTCTACCTGTTAAAAGGAATTTTTTCCTTGTCGCTGTGGCACCAAATGCTTGttcttggggggaattgttgggtctctgtaaattatagtgtggtctacaTCTACTCTACTCTAGACCTAATCtgaagtgtcctgagataacttctgttgtgatttgacactataaatacaatttaattgaaTCGATGATAGGCAGCTTTAAATTGTTTATCTATAGAACTTGTCATTGGAACGGTGGGTGCTGTTCATGATAAGATTCTGCGATGTCATAATGAGCCATTCTAGAATCTAGAATCCTGTATGTGGAAGCATAAGTCTTACACACAACTGGAACCACTTGTTGAGAGTCAGGAGAGAAACCTGTACCTAAGTTATAAGGAGTAACAGTCTTCATACTAAAGAGCAAAGATGTCGGTGTATAATCAGCTCCGTCTGGAACAAGAGCTTTGTGACGCGGTGATCAAAGTGGACAATGTTGAATTTCCCACACACAAAATCATCCTCTGCAACTGCAGCCCGTACTTCAAAGCTCTTTTCACCCACTGGTCAACCCCAGACAGTCGGGTCTTTGACATTCCCAATGTGTCCCCCGACATGATGAAGCTCATCATTGAGTTTGCCTACACTGGCTTTGTTCCTGTGACACAAAATAATATACAAGAGCTTTTTATCGCAGCAGACCGGTTCAATGTAATGGGCATCATACAAGCCTGCTGTGACCTCCTGGAGAAGCAGCTGACCCCACAAAACTGCATCGGCATCTGGTGGTTCACAGACATCTATTACACCCCTGAACTGAACCACAAGACATTCCTTTACATGCTGAATCACTTTGAGGAGATTGCTGCCACCTCAGAAGAGTTCCTGCAGCTCTCTGCGCAGGAACTTGCTAAGATCATTGCGAATGACCGTCTCAATGTGAAGCAGGAGAATACGGTGTTTAGGGCTGTCCTTCGCTGGATCGCCTACGCAAATGAGGAACGCAGAGAAAACATCTCTCTGCTTTTGTCCAACGTCAGGCTGGCTTTAATGAGTCCAGAATACATCACAGACAGTGTGAGCGACAACGAACTGGTGAAGGCAAGTAAAGATTGTCGACCGATTCTCCTGAGGACCCTGGAGGCCATGCTTGACCTGCGAACAAAGGGGTTCTCTGACTGTATTTCTTATAACCCTTTGGCCCGCCCACGACTGCCCTCTGCCATCCTGTTGGCCATTGGAGGCTGGAGCGGAGGCAGTCCCACCCATGGTATCGAGGCGTACGATGTCCGTGCTAACTGCTGGATCAATGTAACAAACAATGAGGAGGGTCCCCGGGCCTACCATGGCACAGTTTTCCTCGATGGATCCGTATATTGTGTCGGTGGCTTTGACAGTGTAGAGCAGTTCAGCTCTGTGCATAGGTTCAACCTGGGCACGCATACCTGGCAGGAGGTTACACAAATGCATTTGAGTCGCTGCTACGTCAGCGTAACTGTGATGGACGGGTGCATATATGCCATGGGAGGTTATGATGGACATGATCGACTCAGAAGTGCTGAGCGCTATCAGCCCAAAATCAACCAGTGGACTTTAATTGCGCCCATGCATGTACAGAGGAGTGATGCCAGCTGCACAACCCTCCATGGCAAGGTGTACATTTGCGGTGGCTTCAATGGGAGCGAGTGCCTGTCATCGGCTGAATGTTACGACCCAGAGACCAACCAGTGGACACTGATCGCCTCCATGGCCAGCATGCGCAGTGGAACTGGGGTCATCGCCTATGCAGACCATGTCTTTGCGGTCGGTGGTTTCAATGGAACCAGTCGTCTGCGCACTGCTGAGGCCTACAACCCCCACACCGACACCTGGCACGCTGTGCCCTCTATGCTGGGCTCCCGAAGTAACTTTGGTATCGCAGTGATCGATGACCGTCTCTATGTGGTTGGGGGCTTCAACGGCTTTACCACCATTCCAGACGTTGAGTGCTTTGATGTCGAAGCTGGTGAGTGGTCTGATGTCCGTGACATGGAGATCTCCCGCAGCGCCCTGAGCTGCTGCGTGGTGTACGGACTCCCCAACTTGGCCGAGTATGCTGCCCCTCATCACTCCCTGGATGAAGTGGAATGATGATGATCCACCTCACTATAAGCTGAATTGttttgtaaataaatgtctttatGCATGAAATTACAGCAGTGCTTCTGTTACTC

Function

GO: NA

KEGG:

id description
K10448 KLHL10; kelch-like protein 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801389.1 True 2366 mRNA 0.48 5 26247997 26259954

Neighbor

gene id symbol gene type direction distance location
rprd1b rprd1b coding upstream 715 26236839 ~ 26247282 (+)
her12 LOC101486328 coding upstream 24154 26222495 ~ 26223843 (+)
LOC120558413 LOC103372574 coding upstream 29915 26216514 ~ 26218082 (+)
ubr4 NA coding upstream 35841 26149350 ~ 26212156 (+)
LOC120559097 NA coding upstream 111820 26127317 ~ 26136177 (+)
LOC120559018 NA coding downstream 6853 26266807 ~ 26274788 (+)
LOC120559111 LOC104966951,LOC104926426,LOC101067761,LOC103384493 coding downstream 106136 26366090 ~ 26374329 (+)
LOC120559112 shmt2,LOC103362774,LOC102296343,LOC102798994 coding downstream 123637 26383591 ~ 26393733 (+)
LOC120559752 slc32a1,LOC103362770,LOC104926430,LOC101482923,LOC102798107,LOC102295106 coding downstream 164159 26424113 ~ 26427752 (+)
bpifcl NA coding downstream 168524 26428478 ~ 26435464 (+)
G53109 NA non-coding upstream 148362 26096359 ~ 26099635 (+)
LOC120559215 NA non-coding upstream 250903 25995233 ~ 25997094 (+)
G53056 NA non-coding upstream 436950 25809713 ~ 25811047 (+)
LOC120558677 NA non-coding upstream 1232599 25009989 ~ 25015398 (+)
G52892 NA non-coding upstream 1287894 24959816 ~ 24960103 (+)
G53221 NA non-coding downstream 65267 26325221 ~ 26325468 (+)
G53222 NA non-coding downstream 65965 26325919 ~ 26329616 (+)
G53223 LOC103362778,LOC108236819,LOC101165391 non-coding downstream 70130 26330084 ~ 26330628 (+)
G53239 NA non-coding downstream 104488 26364442 ~ 26364837 (+)
G53248 LOC101164642,LOC104966947,LOC100690915,LOC102195969,LOC104926428,LOC101062277 non-coding downstream 137245 26397199 ~ 26402428 (+)
G53096 ybx1 other upstream 171333 26071585 ~ 26076664 (+)
tprg1l tprg1l,LOC102784883,LOC106513028 other upstream 499676 25743589 ~ 25748321 (+)
G52871 LOC104956590 other upstream 1290667 24953442 ~ 24957330 (+)
LOC120559118 LOC102791662 other upstream 1302677 24940795 ~ 24945320 (+)
ctnnbip1 ctnnbip1 other upstream 2433591 23791447 ~ 23814406 (+)
G53232 LOC104966952,LOC103362776,LOC102800046,LOC102208894 other downstream 92506 26352460 ~ 26353463 (+)
LOC120559113 LOC108236696,LOC104966950,LOC103362773,LOC103384494 other downstream 118238 26378192 ~ 26383047 (+)
atp5f1e NA other downstream 183096 26443050 ~ 26444890 (+)
LOC120559571 vapb,LOC100711919,LOC102796136,LOC101481364 other downstream 223578 26483532 ~ 26537351 (+)
gnas gnas,LOC102796627,LOC104936173 other downstream 230488 26490442 ~ 26523888 (+)

Expression


Co-expression Network