LOC120559612 (LOC103363412,LOC108249421,LOC107391357)


Basic Information

Item Value
gene id LOC120559612
gene name LOC103363412,LOC108249421,LOC107391357
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 37220534 ~ 37254041 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801458.1
GGCGGGCAGTGGGAAGTGTCAGGGTCAGGGGGTAGGAGCGTTGAAACATGGAAACAATTCAATAGGCCCAGCGGGTGCAGTATGAGCAGGCCATAGGCGGCGAGTGAATTCCCCACAGAGCAATCCATCACCAGAGCCCCTGAGAGAAAGCCACAGttgccttgttttctttcttttttttggaaagGAAGAGGAGTGTCTCTACATGTGACATCACAAGAAACTTGAAACCGTCATTTTCAGCAAGCAGCCCTCCCAACTCACTGCCCGCTCCCACATTTGCTCCCCTCTCCCCAATCTCTCCCCGAAGGTGCTCCGTGCTCCAGAAACAGGCCAGTGTTGGTATCCTCTCAGCCCCCAAACTATCCCTCTGATCCCAGGAACTTCAACACACAGgccacccctcccccctctccccacaCACCTCTGCTTCAGAAAGTCAGCCGGGTCTGTTTTCTGGAGATATACCGatttcacCTTTCAAAaacttctctctctatctgacGGAATAAGTCAGCCTATGTCCCTAAAGTATGGAACTGCAGAAGCTATCAATTGGTAATCATCACCTTGATGATGCTGTGCCTGCGGAGGGAGGAATCCCAGCAGAGGAGGAAATGTTCCTGCCACACAAGAGCGATGGATCAAAGAGACCTCAGTTCACAGACTTTGAGGGTAAAACCTCTTTTGGGATGTCTGTCTTCAACCTGAGCAATGCCATCATGGGCAGCGGCATTCTGGGTCTGTCCTACGCCATGTCCAACACTGGCATCGTCCTTTTCCTGATCCTGCTGACATGTATCGCCGCTCTGTCCTGTTACTCCGTCCATCTGCTGCTCCGCAGTGCTGGGGTTGTGGGTATTCGTGCCTACGAGCAGCTCGGCATGAGAGCTTTTGGTCACCCAGGGAAGATCGTAGCAGCTATCGTCATCACGCTACATAACATCGGAGCCATGTCCAGCTACCTGTTCATAGTCAAATCGGAGTTACCGCTGGTCATCCAAGCCTTTCTGGGCCAGACATCCAGCTCTGACGACTGGTTCATGAATGGAAACTACCTCATCATCATCGTCACTCTGGGCATCATCCTCCCCCTGGCTCTGATGAAACACCTGGGCTATCTTGGTTACACCAGcggcttctctctctcctgcatGGTCTTCTTCCTCTCTGCGGTCATCTACAAGAAATTCAACATTGCTTGCCCTCTGGAAGTGTTTGGCAACTACTCTGTGACCACCGACGTCTCAGAGGACACATGCGCTGTCAAATACCTCACCATCAACcaagagACGGCGTATACCATCCCCATCCTGGCATTTGCTTTCGTATGTCACCCCGAAGTGCTTCCCATCTACACTGAACTGACCAACCCAACCAAGAGAAGAATGCAGAATATTGGGAACGTTTCCATCCTGGGCATGTTCAGCATGTACTTCCTCACCGCCACATTCGGCTATCTGACCTTCTACGggaacacTGAGGCAGAGCTGCTCCATACCTACAGTAAGGTGGACCCCCTGGACACTCTGATCCTGTGTGTTCGCCTGGCTGTCCTGGTGGCAGTCACTCTGACTGTACCCGTGGTCTTGTTTCCTATCCGGCGGGCCCTCCTGCAGCTGCTGTTTCCAGGGAAAGCCTTCCACTGGCTGCGTCACATCGCCATCGCCTTGTGTCTGCTGTTTGTTGTCAACCTGCTGGTCATCCTCGTTCCTAACATCCGAGACATCTTCGGCATTACAGGGGCAACCACTGCTCCCAGTCTGATCTTCATCCTTCCTGGACTGTTCTACATTCGCATCGTCCCCACCGACCAGGAGCCCATGACCTCCAGACCAAAGATCCAGGCTGCGTGTTTCACAGCGCTGGGTTTCATTTTCATGTCCATGAGCCTGACGTTCATCGGGATTGACTGGATGACCGGAGAAAACCGAAATCTCGGCGGCCATTAAAGTGTTCGCCCCCAAGCCCTACAGCGACAGCAGCCCACCGCTGCGACCATCCATCCTGCGCTCCTCCCCATTGGGGGGGAAGCAACCTTTCTGCTGGAAGGCTCGGGGCTTTTTGGCGGGAGTGCTTTTATTAATCATAGGGGACAACCCCTTCCTCCAGAGCGATGAGAGGAGCCCCGACTTGTCCCGTCACCCACCCAGCACCACCAGGATCCATCACAGGTGGTGTCGTTCCTCCGTTCTCACATGAAGAGCTGACGGACATGTTGACCATTGCAGCCCCCTCAACCTTTAAAAAGATATTCGCCCTAACAGAAGCTAAATGTGGTGCAGATttacagtgtttctcaaatgttttcagaccCAGGATTACTTACCCAATAAAAGAAAACTCACAGACCAtctaactagggctgggcgatatggagaaaatcaaatatcacgatatttttgaccaaatacctcgatatcgataccgcaacgatattgtgctgttgactattggtgctttcactaaatatttacacaa
>XM_039801459.1
ACTCCATTCTTCTGGCTGAGTTGGAGCTTACTTTGCTGCCACGTGGTTTGGCTTTTTGAGGAATGGTCTGCTCAGGAAAAGGGTGAAGACCCCGCAGCAGAAGCGCTGAGCTTTGTTACAAGAGGCTTTGATTTTGAAAGatttcacCTTTCAAAaacttctctctctatctgacGGAATAAGTCAGCCTATGTCCCTAAAGTATGGAACTGCAGAAGCTATCAATTGGTAATCATCACCTTGATGATGCTGTGCCTGCGGAGGGAGGAATCCCAGCAGAGGAGGAAATGTTCCTGCCACACAAGAGCGATGGATCAAAGAGACCTCAGTTCACAGACTTTGAGGGTAAAACCTCTTTTGGGATGTCTGTCTTCAACCTGAGCAATGCCATCATGGGCAGCGGCATTCTGGGTCTGTCCTACGCCATGTCCAACACTGGCATCGTCCTTTTCCTGATCCTGCTGACATGTATCGCCGCTCTGTCCTGTTACTCCGTCCATCTGCTGCTCCGCAGTGCTGGGGTTGTGGGTATTCGTGCCTACGAGCAGCTCGGCATGAGAGCTTTTGGTCACCCAGGGAAGATCGTAGCAGCTATCGTCATCACGCTACATAACATCGGAGCCATGTCCAGCTACCTGTTCATAGTCAAATCGGAGTTACCGCTGGTCATCCAAGCCTTTCTGGGCCAGACATCCAGCTCTGACGACTGGTTCATGAATGGAAACTACCTCATCATCATCGTCACTCTGGGCATCATCCTCCCCCTGGCTCTGATGAAACACCTGGGCTATCTTGGTTACACCAGcggcttctctctctcctgcatGGTCTTCTTCCTCTCTGCGGTCATCTACAAGAAATTCAACATTGCTTGCCCTCTGGAAGTGTTTGGCAACTACTCTGTGACCACCGACGTCTCAGAGGACACATGCGCTGTCAAATACCTCACCATCAACcaagagACGGCGTATACCATCCCCATCCTGGCATTTGCTTTCGTATGTCACCCCGAAGTGCTTCCCATCTACACTGAACTGACCAACCCAACCAAGAGAAGAATGCAGAATATTGGGAACGTTTCCATCCTGGGCATGTTCAGCATGTACTTCCTCACCGCCACATTCGGCTATCTGACCTTCTACGggaacacTGAGGCAGAGCTGCTCCATACCTACAGTAAGGTGGACCCCCTGGACACTCTGATCCTGTGTGTTCGCCTGGCTGTCCTGGTGGCAGTCACTCTGACTGTACCCGTGGTCTTGTTTCCTATCCGGCGGGCCCTCCTGCAGCTGCTGTTTCCAGGGAAAGCCTTCCACTGGCTGCGTCACATCGCCATCGCCTTGTGTCTGCTGTTTGTTGTCAACCTGCTGGTCATCCTCGTTCCTAACATCCGAGACATCTTCGGCATTACAGGGGCAACCACTGCTCCCAGTCTGATCTTCATCCTTCCTGGACTGTTCTACATTCGCATCGTCCCCACCGACCAGGAGCCCATGACCTCCAGACCAAAGATCCAGGCTGCGTGTTTCACAGCGCTGGGTTTCATTTTCATGTCCATGAGCCTGACGTTCATCGGGATTGACTGGATGACCGGAGAAAACCGAAATCTCGGCGGCCATTAAAGTGTTCGCCCCCAAGCCCTACAGCGACAGCAGCCCACCGCTGCGACCATCCATCCTGCGCTCCTCCCCATTGGGGGGGAAGCAACCTTTCTGCTGGAAGGCTCGGGGCTTTTTGGCGGGAGTGCTTTTATTAATCATAGGGGACAACCCCTTCCTCCAGAGCGATGAGAGGAGCCCCGACTTGTCCCGTCACCCACCCAGCACCACCAGGATCCATCACAGGTGGTGTCGTTCCTCCGTTCTCACATGAAGAGCTGACGGACATGTTGACCATTGCAGCCCCCTCAACCTTTAAAAAGATATTCGCCCTAACAGAAGCTAAATGTGGTGCAGATttacagtgtttctcaaatgttttcagaccCAGGATTACTTACCCAATAAAAGAAAACTCACAGACCAtctaactagggctgggcgatatggagaaaatcaaatatcacgatatttttgaccaaatacctcgatatcgataccgcaacgatattgtgctgttgactattggtgctttcactaaatatttacacaa
>XM_039801460.1
CAGTGGCTTCCTACTCAAAatttcacCTTTCAAAaacttctctctctatctgacGGAATAAGTCAGCCTATGTCCCTAAAGTATGGAACTGCAGAAGCTATCAATTGGTAATCATCACCTTGATGATGCTGTGCCTGCGGAGGGAGGAATCCCAGCAGAGGAGGAAATGTTCCTGCCACACAAGAGCGATGGATCAAAGAGACCTCAGTTCACAGACTTTGAGGGTAAAACCTCTTTTGGGATGTCTGTCTTCAACCTGAGCAATGCCATCATGGGCAGCGGCATTCTGGGTCTGTCCTACGCCATGTCCAACACTGGCATCGTCCTTTTCCTGATCCTGCTGACATGTATCGCCGCTCTGTCCTGTTACTCCGTCCATCTGCTGCTCCGCAGTGCTGGGGTTGTGGGTATTCGTGCCTACGAGCAGCTCGGCATGAGAGCTTTTGGTCACCCAGGGAAGATCGTAGCAGCTATCGTCATCACGCTACATAACATCGGAGCCATGTCCAGCTACCTGTTCATAGTCAAATCGGAGTTACCGCTGGTCATCCAAGCCTTTCTGGGCCAGACATCCAGCTCTGACGACTGGTTCATGAATGGAAACTACCTCATCATCATCGTCACTCTGGGCATCATCCTCCCCCTGGCTCTGATGAAACACCTGGGCTATCTTGGTTACACCAGcggcttctctctctcctgcatGGTCTTCTTCCTCTCTGCGGTCATCTACAAGAAATTCAACATTGCTTGCCCTCTGGAAGTGTTTGGCAACTACTCTGTGACCACCGACGTCTCAGAGGACACATGCGCTGTCAAATACCTCACCATCAACcaagagACGGCGTATACCATCCCCATCCTGGCATTTGCTTTCGTATGTCACCCCGAAGTGCTTCCCATCTACACTGAACTGACCAACCCAACCAAGAGAAGAATGCAGAATATTGGGAACGTTTCCATCCTGGGCATGTTCAGCATGTACTTCCTCACCGCCACATTCGGCTATCTGACCTTCTACGggaacacTGAGGCAGAGCTGCTCCATACCTACAGTAAGGTGGACCCCCTGGACACTCTGATCCTGTGTGTTCGCCTGGCTGTCCTGGTGGCAGTCACTCTGACTGTACCCGTGGTCTTGTTTCCTATCCGGCGGGCCCTCCTGCAGCTGCTGTTTCCAGGGAAAGCCTTCCACTGGCTGCGTCACATCGCCATCGCCTTGTGTCTGCTGTTTGTTGTCAACCTGCTGGTCATCCTCGTTCCTAACATCCGAGACATCTTCGGCATTACAGGGGCAACCACTGCTCCCAGTCTGATCTTCATCCTTCCTGGACTGTTCTACATTCGCATCGTCCCCACCGACCAGGAGCCCATGACCTCCAGACCAAAGATCCAGGCTGCGTGTTTCACAGCGCTGGGTTTCATTTTCATGTCCATGAGCCTGACGTTCATCGGGATTGACTGGATGACCGGAGAAAACCGAAATCTCGGCGGCCATTAAAGTGTTCGCCCCCAAGCCCTACAGCGACAGCAGCCCACCGCTGCGACCATCCATCCTGCGCTCCTCCCCATTGGGGGGGAAGCAACCTTTCTGCTGGAAGGCTCGGGGCTTTTTGGCGGGAGTGCTTTTATTAATCATAGGGGACAACCCCTTCCTCCAGAGCGATGAGAGGAGCCCCGACTTGTCCCGTCACCCACCCAGCACCACCAGGATCCATCACAGGTGGTGTCGTTCCTCCGTTCTCACATGAAGAGCTGACGGACATGTTGACCATTGCAGCCCCCTCAACCTTTAAAAAGATATTCGCCCTAACAGAAGCTAAATGTGGTGCAGATttacagtgtttctcaaatgttttcagaccCAGGATTACTTACCCAATAAAAGAAAACTCACAGACCAtctaactagggctgggcgatatggagaaaatcaaatatcacgatatttttgaccaaatacctcgatatcgataccgcaacgatattgtgctgttgactattggtgctttcactaaatatttacacaa

Function

NR:

description
PREDICTED: sodium-coupled neutral amino acid transporter 3-like

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801458.1 True 2481 mRNA 0.52 16 37220534 37254041
XM_039801459.1 False 2151 mRNA 0.51 16 37220534 37253564
XM_039801460.1 False 2030 mRNA 0.51 16 37220534 37253354

Neighbor

gene id symbol gene type direction distance location
tbc1d25 tbc1d25 coding downstream 48330 37156368 ~ 37172204 (-)
LOC120559725 rpl22,LOC102779685,LOC106566811,LOC106572248,LOC100699599,LOC101484027,LOC102785448,LOC103376530,LOC102235575,LOC104936395 coding downstream 158839 37053787 ~ 37061695 (-)
plod1a NA coding downstream 268255 36903077 ~ 36952279 (-)
gmeb2 gmeb2,LOC102776727 coding downstream 354232 36850850 ~ 36866302 (-)
stk35 LOC105921027,LOC108249422 coding downstream 415864 36780301 ~ 36804670 (-)
mthfr mthfr coding upstream 43464 37297505 ~ 37329403 (-)
LOC120559054 NA coding upstream 820376 38074417 ~ 38077028 (-)
LOC120559055 NA coding upstream 825840 38079881 ~ 38082216 (-)
tfe3a NA coding upstream 829781 38083822 ~ 38118628 (-)
fgd1 fgd1,LOC103367265 coding upstream 879181 38133222 ~ 38188792 (-)
G56291 NA non-coding downstream 73092 37145334 ~ 37147442 (-)
G56265 NA non-coding downstream 102078 37066665 ~ 37118456 (-)
G56279 NA non-coding downstream 102385 37102736 ~ 37118149 (-)
G56250 NA non-coding downstream 195179 37024934 ~ 37025355 (-)
G56245 NA non-coding downstream 240198 36975594 ~ 36980336 (-)
G56308 NA non-coding upstream 18352 37272393 ~ 37276725 (-)
G56314 NA non-coding upstream 33609 37287650 ~ 37287959 (-)
G56315 NA non-coding upstream 36107 37290148 ~ 37290506 (-)
G56316 NA non-coding upstream 40506 37294547 ~ 37294852 (-)
G56318 NA non-coding upstream 55957 37309998 ~ 37310557 (-)
phc2a LOC103367632,LOC102778931,LOC100708466,LOC102197996 other downstream 219383 36984885 ~ 37001151 (-)
rhoaa LOC106529366,LOC107558917,LOC102777028,LOC107687289,LOC103367639,LOC107599000,LOC103384870,LOC106572042 other downstream 324994 36884803 ~ 36895540 (-)
LOC120559655 mtch1,LOC102799640 other downstream 476402 36723238 ~ 36744132 (-)
G56160 NA other downstream 496325 36681899 ~ 36724209 (-)
LOC120559361 NA other downstream 660575 36557530 ~ 36559959 (-)
G56335 NA other upstream 118594 37372635 ~ 37373316 (-)
G56376 NA other upstream 315019 37569060 ~ 37839849 (-)
LOC120559227 esd other upstream 628127 37882168 ~ 37900343 (-)
G56436 NA other upstream 672153 37926194 ~ 37940548 (-)
LOC120559229 NA other upstream 745961 38000002 ~ 38046669 (-)

Expression


Co-expression Network