LOC120559655 (mtch1,LOC102799640)


Basic Information

Item Value
gene id LOC120559655
gene name mtch1,LOC102799640
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 36723238 ~ 36744132 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801554.1
GAGGATTTTGCCAGAACAACAATCATAATAAAACCTACACTACATGTGTTATAACTGAGTAGGATTTATTACAGCTGTATTTCGTTCGCTACAACAACAGGGTCACACCGCAATTTACCTCTGAGGCAGAGaatattattttgaaaattcAAAGCGGAAATTGTTTTTGTAGCTTAGCGTAGCTGTCTTTCTTACAGTTAATGGGGATCCAAACTTTAGGGTAAATTAAAGATGGAATCGTCAGAAAACCTCTCCGGTCAGGAAGTCGGTGTTGAGCAGGATGCTACACCGACTCTCGTGGATGTGGACACCGCGTTGTTGCTGCTGGGAGCGGGAGTAACAGCCATCACACACCCTCTGCTATACGTGAAGCTGCTAATACAGGTGGGACATGAACCTCTTCCCCCAACTGTGGGCACAACTATGTTTGGACGAAGAGTCTTATACCTGCCGGGCTTCTTCTCCTACGCACGTCACATTGTGAAAGTAGATGGAAAGAGGGGACTCTTCCGCGGCCTCTCACCCCGTATCATGTCCAGCGCCATCTCCACTGTGGTCAGGAGCAAAGTGAAACAGCAGGTGGAGCTCCTATCCAAGAAAGACGAGCTGCAGACATCACTTAGGAAAGTGGTGAAGGAGACCTCACATGAGATGATCATCCAGTGCCTGTCCAGAGTAGCCACTCATCCTTTTCATGTTATGTCAGTGCGGTGTATGGCCCAGTTTGTTGGCAGAGAGGTGAAGTATGGTGGGATATTCAGTTGTATTATCAAGATTTTTAAAGAAGAAGGAGTTGCTGGATTCTATGTcgGGCTCATACCCCACGTGGCGGGAGAAGTCCTCTTCCTGTGGTTTTGTAACCTCCTGGCTCACTTTATTAACACCTACGCTGTAGACGAAAGTTTCACTCAGGCCTCGGCGGTACGAAGCTACACTAAGTTTGTGATGGGCATTGCAGTGAGTGCTCTTACATACCCATTCATGCTGGTGGCCGATATTATGGCAGTCAACAACTGTGGGTTGGCTGCAGGTGTTCCTCCTCACTCTCCCATCTTCAAGTCGTGGCTGCACTGCTGGAATCACCTCAGCCACAAGGATCAGCTCTTCAGAGGATCCAGCTTCTTTTTTCGCCGGGTGCCCGTCACCTCCTGGCCCTCCACCGAGGgataacatcatcatcatcattacatcatcatcatcatcatcatcatcattacatCATCCTCTGCTGGGATGTTCTTCCTCTGTCTGCtcacaaacacccccccccgACCCCCCCGGCCCAGAGGTAGAAAGAGTACAGAAATATTccacttaaagtaaaagtacttatacTTGGATGAACTtgaacttaaagctatagtgcgtatagtttctgtcgcccccg
>XR_005639341.1
AGAGGATTTTGCCAGAACAACAATCATAATAAAACCTACACTACATGTGTTATAACTGAGTAGGATTTATTACAGCTGTATTTCGTTCGCTACAACAACAGGGTCACACCGCAATTTACCTCTGAGGCAGAGaatattattttgaaaattcAAAGCGGAAATTGTTTTTGTAGCTTAGCGTAGCTGTCTTTCTTACAGTTAATGGGGATCCAAACTTTAGGGTAAATTAAAGATGGAATCGTCAGAAAACCTCTCCGGTCAGGAAGTCGGTGTTGAGCAGGATGCTACACCGACTCTCGTGGATGTGGACACCGCGTTGTTGCTGCTGGGAGCGGGAGTAACAGCCATCACACACCCTCTGCTATACGTGAAGCTGCTAATACAGGTGGGACATGAACCTCTTCCCCCAACTGTGGGCACAACTATGTTTGGACGAAGAGTCTTATACCTGCCGGGCTTCTTCTCCTACGCACGTCACATTGTGAAAGTAGATGGAAAGAGGGGACTCTTCCGCGGCCTCTCACCCCGTATCATGTCCAGCGCCATCTCCACTGTGGTCAGGAGCAAAGTGAAACAGCAGGTGGAGCTCCTATCCAAGAAAGACGAGCTGCAGACATCACTTAGGAAAGTGGTGAAGGAGACCTCACATGAGATGATCATCCAGTGCCTGTCCAGAGTAGCCACTCATCCTTTTCATGTTATGTCAGTGCGGTGTATGGCCCAGTTTGTTGGCAGAGAGGTGAAGTATGGTGGGATATTCAGTTGTATTATCAAGATTTTTAAAGAAGAAGGAGTTGCTGGATTCTATGTcgGGCTCATACCCCACGTGGCGGGAGAAGTCCTCTTCCTGTGGTTTTGTAACCTCCTGGCTCACTTTATTAACACCTACGCTGTAGACGAAAGTGTAAGTCCCTCACCTTTATGGATGGTAGAAGAGAGCGAGTGTACGAAAGACAACAAGCTATGTTCACTCAGGCCTCGGCGGTACGAAGCTACACTAAGTTTGTGATGGGCATTGCAGTGAGTGCTCTTACATACCCATTCATGCTGGTGGCCGATATTATGGCAGTCAACAACTGTGGGTTGGCTGCAGGTGTTCCTCCTCACTCTCCCATCTTCAAGTCGTGGCTGCACTGCTGGAATCACC

Function

symbol description
mtch1 Involved in activation of cysteine-type endopeptidase activity involved in apoptotic process and positive regulation of apoptotic process. Located in mitochondrion.

NR:

description
PREDICTED: mitochondrial carrier homolog 1 isoform X1

GO: NA

KEGG:

id description
K17885 MTCH; mitochondrial carrier

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801554.1 True 1387 mRNA 0.48 12 36723238 36744131
XR_005639341.1 False 1147 transcript 0.48 11 36726596 36744132

Neighbor

gene id symbol gene type direction distance location
lrif1 NA coding downstream 97269 36610137 ~ 36625969 (-)
si:dkeyp-110g5.4 NA coding downstream 116470 36599573 ~ 36606768 (-)
igf3 LOC108228312 coding downstream 134526 36581523 ~ 36588712 (-)
plch2a plch2,LOC106935153 coding downstream 275446 36272871 ~ 36447792 (-)
LOC120559648 LOC103362257,LOC106633114,LOC101486280 coding downstream 453213 36253176 ~ 36270025 (-)
stk35 LOC105921027,LOC108249422 coding upstream 36169 36780301 ~ 36804670 (-)
gmeb2 gmeb2,LOC102776727 coding upstream 106718 36850850 ~ 36866302 (-)
plod1a NA coding upstream 158945 36903077 ~ 36952279 (-)
LOC120559725 rpl22,LOC102779685,LOC106566811,LOC106572248,LOC100699599,LOC101484027,LOC102785448,LOC103376530,LOC102235575,LOC104936395 coding upstream 309655 37053787 ~ 37061695 (-)
tbc1d25 tbc1d25 coding upstream 412236 37156368 ~ 37172204 (-)
G56155 NA non-coding downstream 10595 36683640 ~ 36712643 (-)
G56167 NA non-coding downstream 23637 36657889 ~ 36699601 (-)
G56162 NA non-coding downstream 107387 36614577 ~ 36615851 (-)
G55662 NA non-coding downstream 124966 36594225 ~ 36598272 (-)
G55664 NA non-coding downstream 127413 36593238 ~ 36595825 (-)
G56190 NA non-coding upstream 8313 36752445 ~ 36752701 (-)
G56191 NA non-coding upstream 8625 36752757 ~ 36753054 (-)
G56195 NA non-coding upstream 12081 36756213 ~ 36756471 (-)
G56197 NA non-coding upstream 13823 36757955 ~ 36758651 (-)
G56215 NA non-coding upstream 53311 36797443 ~ 36798196 (-)
LOC120559361 NA other downstream 163279 36557530 ~ 36559959 (-)
si:ch73-70k4.1 NA other downstream 824502 35874622 ~ 35898736 (-)
G55492 NA other downstream 1313472 35404604 ~ 35409766 (-)
LOC120559165 NA other downstream 1445384 35269896 ~ 35277854 (-)
ntsr1 ntsr1,LOC103361890,LOC104959625 other downstream 2432169 34236566 ~ 34291069 (-)
rhoaa LOC106529366,LOC107558917,LOC102777028,LOC107687289,LOC103367639,LOC107599000,LOC103384870,LOC106572042 other upstream 140671 36884803 ~ 36895540 (-)
phc2a LOC103367632,LOC102778931,LOC100708466,LOC102197996 other upstream 240753 36984885 ~ 37001151 (-)
G56335 NA other upstream 628503 37372635 ~ 37373316 (-)
G56376 NA other upstream 824928 37569060 ~ 37839849 (-)
LOC120559227 esd other upstream 1138036 37882168 ~ 37900343 (-)

Expression


Co-expression Network