eif2s2 (eif2s2)


Basic Information

Item Value
gene id eif2s2
gene name eif2s2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 26547156 ~ 26553116 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801580.1
CGGATTTGGAGACTTCACGCTTGCGTATTGCGGATCCAACGCTGATGCAAGACATTTTCGGCGCAGCATTGTGGGGCTGATCGAGGAACAAAAAGTAGCCAGATTGCAGTCACTTTTCAACCCGCAAACATGTCAGGAGACGAGATGATTTTCGATCCCAACATgaccaagaagaagaagaagaagaagaagccctTCATGCTGGatgaggaaggaggagaagggGTGGGAGGAGAAGAGGCTAGAGAGGTGGAGGCGAAGGAGGCCGAACCAGAGCCGGGAGACGACAAGGAGCTGGATCTAGAAGAAGATGAATGCAGGAAGAAAGAGCCGTCCGATGATTTGAACGACTTGAACTTCTTCAaccagaagaaaaagaagaagaaacccaAGAAAGTGTTTGAGAATGATGTCGAGGAGGGATTAAAGGAGCTGAAAATTGAAGGAGAGCAGCTAGAGGTGCTGGAGGAGGACAACCTGGATCTGATGCTTCCTACCAAAAAGAAGAAGTCGAAGAAAGTGGACTTTGATGAGGGAGAGTTGCTGGAGAAGGATGACGTATTAGAGGATGATGAGGGGAAGAACAATGATGGGATCTCATTCAGCTCGTCCACAGGACCAACCTGGGCCGGCACTGAAAGAGACTACACTTATGATGAGCTCCTGAACAGAGTCTTCAACATTATGAGAGAGAAGAACCCGGACATGGTGGCCGGAGAGAAGAGGAAGTTTGTGATGAAGCCTCCTCAGGTGGTCCGAGTGGGAACCAAGAAAACCTCCTTTGTCAACTTCACAGATATCTGCAAACTGTTGCATCGTCAGCCCAAACATCTCCTCGCTTTCCTGTTGGCTGAGCTGGGAACAAgTGGTTCCATAGACGGAAATAACCAGCTTGTGATCAAAGGCAGATTTCAACAGAAACAGATAGAAAATGTGTTAAGAAGATATATCAAGGAATACGTGACGTGTCACACCTGCCGCTCCCCAGAGACCATCCTGCAGAAGGACACTCGCCTCTATTTCCTGCAGTGTGAAACGTGCCACTCCCGCTGCTCCGTCGCCAGCATCAAGACCGGCTTCCAGGCTGTGACGGGCAAGAGGGCGCAGCTCCGCGCCAAAGCCAACTAAAGACCACCGAAACTGggctccccctcctctctcggCCTCCCCTTTCTCCTCAGAGGGGCCGCGGCTGGGGTTGGACGCCCCCTTGATTTCGCTAAAAGGACTCTCTGAATCGAACTGTGGGAGGGTTTGGCTGTTGTTAAGTTGTCGTGGCCTGACAGGGCAGGGAGTGAGAGAGTATCTGAAGCTGAACAGATGGGGTTCAGGCACTGTAAGCAGATGATGTGTACCACATACACTGTTGGATGCATTTGATTTGTTGTGATCTGGCTGACGAATCCTCCACctcctagttttttttttttcttcatttgctGTGCTTCTTGATTCCAAGAAAACCCTGCTTTAATGTGGCTTCCTCATTCTTTCCTCTCCAATTTACATACACCAGACATGCAACCAGCCAAATTGCAGTAAAGCTAAGTTGATCTACAATAACAAGAGCGTAGTTGCTCTGGTATTTGTAGTCATGTGGCTAATGCGGTCACCTCTTTATTCTTAAATTCCACATTGCTTAAACTCAAGGTTGTGTTCCTGTTTCTGGACTGGCCTAGAAGTTACAGAACTGCCAGTCCAGAATTTTGTGCTCTAGCTTATCAAAGATAGAACTCAAAATCACCGGGCTAGGCGTACAGGAAGATTTGTCGCTGTAGCTGGTCTGTGACCGGCTCATTACACAGGCCTCGTGTTGATCATCTTATAGCAGGAGATGACCACAAAGTCGAACAACCAGGGATTGATAAAGGAGAGAGCACCTTCCTACTGAATACTTTAAAAGAGGTTGTGTGTTTGACAGACAGAATTAtacagtgtgtttgtgagtgctTTTGTGGCATTGATGAGCAATTGTGTACTTCATTATTTCTTCCTTTTGACTTCTGAAGTTAAGATCAACCCATTTTATCAAACATTGGACATTTTATGGAAAATTGAATAAAATCAATTTTGTCAAGAAGAGCAGGTTTTTTTGAGCTCATGCCATTCCCTTAACACCCAAATGCTTCTCCCCTAAAAACAGCCTGTGAGAAGGCACCTCGGATCAGTCTTCTCTAACAGGTCTTTATTTACACCACAAGCTAATCAGGATATGAAGAGTGAGTCCAATGACACTCGATACTACATGATTTACACGATATTGGTTATCTTCTTGTTTGAGAAGAATGTGGATGAGAAGGTCTGGCTGGAATTGTTTTAAAACCTggtttttacaaaaataaaatattctactctctctctccattca

Function

symbol description
eif2s2 Predicted to enable mRNA binding activity; translation initiation factor activity; and translation initiation factor binding activity. Predicted to be involved in formation of cytoplasmic translation initiation complex and formation of translation preinitiation complex. Predicted to act upstream of or within translational initiation. Predicted to be part of eukaryotic translation initiation factor 2 complex. Orthologous to human EIF2S2 (eukaryotic translation initiation factor 2 subunit beta).

NR:

description
eukaryotic translation initiation factor 2 subunit 2-like

GO:

id name namespace
GO:0006413 translational initiation biological_process
GO:0003743 translation initiation factor activity molecular_function

KEGG:

id description
K03238 EIF2S2; translation initiation factor 2 subunit 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801580.1 True 2368 mRNA 0.46 9 26547156 26553116

Neighbor

gene id symbol gene type direction distance location
LOC120559781 chmp4b,LOC103362760,LOC106511320 coding upstream 846 26539900 ~ 26546310 (+)
bpifcl NA coding upstream 111692 26428478 ~ 26435464 (+)
LOC120559752 slc32a1,LOC103362770,LOC104926430,LOC101482923,LOC102798107,LOC102295106 coding upstream 119404 26424113 ~ 26427752 (+)
LOC120559112 shmt2,LOC103362774,LOC102296343,LOC102798994 coding upstream 153423 26383591 ~ 26393733 (+)
LOC120559111 LOC104966951,LOC104926426,LOC101067761,LOC103384493 coding upstream 172827 26366090 ~ 26374329 (+)
LOC120559568 srsf6,LOC103156038,LOC103362762,LOC103468026,LOC106952897 coding downstream 743 26553859 ~ 26558935 (+)
l3mbtl1 LOC100690549,LOC102290764,LOC101478974 coding downstream 6145 26559261 ~ 26577079 (+)
sgk2a sgk2 coding downstream 27562 26580678 ~ 26594851 (+)
mybl2a NA coding downstream 45379 26598495 ~ 26607748 (+)
nsun5 nsun5 coding downstream 55032 26608148 ~ 26614261 (+)
LOC120559830 NA non-coding upstream 124097 26414885 ~ 26423059 (+)
G53248 LOC101164642,LOC104966947,LOC100690915,LOC102195969,LOC104926428,LOC101062277 non-coding upstream 144728 26397199 ~ 26402428 (+)
G53239 NA non-coding upstream 182319 26364442 ~ 26364837 (+)
G53223 LOC103362778,LOC108236819,LOC101165391 non-coding upstream 216528 26330084 ~ 26330628 (+)
G53222 NA non-coding upstream 217540 26325919 ~ 26329616 (+)
G53285 NA non-coding downstream 74180 26627296 ~ 26631607 (+)
G53418 NA non-coding downstream 267545 26820661 ~ 26823621 (+)
G53445 NA non-coding downstream 436713 26989829 ~ 26993682 (+)
G53455 LOC108233118,LOC101063193,LOC101159349,LOC103384990,LOC104941321,LOC103359395 non-coding downstream 585015 27138131 ~ 27207789 (+)
G53461 NA non-coding downstream 604354 27157470 ~ 27159414 (+)
LOC120559571 vapb,LOC100711919,LOC102796136,LOC101481364 other upstream 9805 26483532 ~ 26537351 (+)
gnas gnas,LOC102796627,LOC104936173 other upstream 23268 26490442 ~ 26523888 (+)
atp5f1e NA other upstream 102266 26443050 ~ 26444890 (+)
LOC120559113 LOC108236696,LOC104966950,LOC103362773,LOC103384494 other upstream 164109 26378192 ~ 26383047 (+)
G53232 LOC104966952,LOC103362776,LOC102800046,LOC102208894 other upstream 193693 26352460 ~ 26353463 (+)
G53305 NA other downstream 246980 26800096 ~ 26800746 (+)
si:dkey-20d21.12 LOC101471973,LOC106098224,LOC107390607 other downstream 631378 27184494 ~ 27187943 (+)
G53488 NA other downstream 702258 27255374 ~ 27255716 (+)
LOC120559859 LOC101468803,LOC100690459 other downstream 859136 27412252 ~ 27417459 (+)
LOC120559343 NA other downstream 1032409 27585525 ~ 27595409 (+)

Expression


Co-expression Network