atp13a2


Basic Information

Item Value
gene id atp13a2
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 29783406 ~ 29804982 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801880.1
ACGCGACTTCCCGTAGAAGGGTATAGTTTGGGATCGTGGGATAATATTGTTTTTCTGGTTATTGTCTGGTTAGGAGGCAGTCTGTCATTTAGGTTGCGATGGTGTGAAAGAAGGTAATGTGGAGGCTGTCATCGTGAGCAGATGATGGATAACCTTAGGCGTGGTAGTGTGGTGGAGCCGCAGAGCGGACTCCCGTCACCCAGTCCACGAGACCCCCTGCTCAGTCCGGACTCTCACATGGATGTTCAGGGGTATAAGTGGGTGCGCTGGCGGTTGTGGTTGTGTCGTCTGGCTGCCGTGCTGTCCTTGGGTGTCCTCCTGATCGTGTTTCACTGGCGCCCAAGGCTTGCTGTCCTGGCACGCTGCTGCTCCTGCCATCTGGCTTTGGCAGATGTTCTGCTAATAAGAGACAGTTTTGGCCAGCAGCATTTGGTGGAGGTCCTCACAGAGGAGATGGATTGCAGCAGTTTGGAAATGGTGGTAGAGCTGGAGGAAATTGAATGGAGAGATACAGTTCAGCTGCACAAGGAGGAGAAAACGCTGCTGCGCTACTACCTGTTTAAAGGACTGCGCTACATCTGGCTGGGCAGGAAAGGAGCTTTCTGTCGTGTCAGTGTCCTCAATGAGGACTGGACCTGCAATGACGTGTATGGCTTCCAAAAGGGCCTGAGTCACCTGGAGCAAAGCCTCAGGAGACTCATGTATGGGCCGAACCTCATTGATGTGCAGGTGAAGTCTTACGTGAAACTGCTGTTTGAGGAGGTCCTCAACCCGTTCTACGTGTTCCAAGTGTTCAGCATCACCCTGTGGATTGTCGACAATTACTATTATTACGccatttgtatatttattatctCCATTTTATCCATCGGTATCTCACTTTATGAGATCCGCAAGCAAAGCGTCACTCTTCGCAACATGGCCCGGTTGGTCACGAATGTCACAATACGGAGAAACTCAGGAGTGGAGGAGCTTGTTAGCTCGGAGGAACTGGCCCCCGGCGACTGTCTAATCATCCCTCAGGAAGGTCTGCTGCTGCCATGTGATGCGGCCCTGCTGGCTGGGGAGTGTCTGGTCAACGAGAGCATGCTCACAGGTGAAAGTGTCCCAGTGCTAAAGACACCACTGCTAGCTGGTGAGGGGAGGTACAGCTCAGAGACTGAGCGCAGACACACCCTATTCTGTGGCACCCAGCTCATTCAGGCCAAAAGTGGAGGTCCGGGAGGCAGCGGGGCTGTTGCTGTGGTCATAAGCACCGGGTTTTTCACAGCCAAAGGTAACCTGGTCAGCTCCATTTTGTATCCTCATCCAACCGACTTCCGCTTCTACCAAGATTCTGTTAAGTTCCTGCTCATCCTTGGTTTTGTTGCTTTTGTTGGCAGCATTTACAGCTTTGTGGTCCTCTTCAGATCGGGTGCGACCTGGCTGGAGTTAGTAATTATGAGCCTGGATGTTGTGACCATCGCAGTGCCTCCTGCACTATCTGCAGCCATCACCACTGGCACTATCTATGCCCAACGCAGGCTGAAGAGCCAGGGCGTCTTCTGCATCAGTCCACCACGCATCAACATCTGTGGCAAGGTCTCGCTCTTCTGCTTTGACAAGACAGGGACTCTTACGGAGGACGGTATGGATGTGTGGGGAGTGATGGAGGGCGGACCTGCCGGTTTCTCAGAGCTGGTCCCAGATCCCAGACTCCTGCCCCCAGGCCCCATGCTCTCAGGCCTGGCCTGCTGTCACACTGTGACGCTGTTGCAAGGACAGCCTCTCGGAGACCCTCTGGAGCTCAAGATGGTCGAGTCCACTGGTTGGACACTCCAGGAGCCAGAGGGAGATGGAAATGTGCTGGATGCAGAGTTTGGAGGCCACAGAGTTTTGGCTGTTTTGAGTCCGCCTACTCAACAGCCTCGAGCTCAAGGAGCTTCTACAAGCGAGGCGGTGGCCATTGTTCAGAGGTTTCCCTTCTCCTCGGCACTGCAGAGGATGAGTGTGGTGACCGTGGCCCGCGGCGGACGTTCGGCCCTCGCATTCATGAAAGGATCCCCAGAAATGGTGGCTAGCCTCTGCCGAGCACAAACTGTGCCAGGGCAGTTCTCCAGCAAACTGCACAGTTTTTCCAGTGAAGGTCTCCGAGTTCTTGCACTCGCCTATAAACCAGTAGACGGGAACACTGACTTAAGCACCATTGAACGAGGGGAGGTAGAGAAAGACATGCAGTTCCTGGgcttgatgatgatgaagaatcTGGTGAAGCCAGAGAGTCCCCAGGTTATTAACATGCTGAGACTGGCACACCTTCGCAGTGTAATGGTCACTGGGGACAACATTTTAACAGCAGTCAATGTAGCAAAAAGCTGTGGGATGGTAGGATTTGATGACAAGGTGATATTCGTCAATGCACCCCCCACTGCCCAGTCCATACCCACCCTGAGGTTCAGCCTGGAAGACAGAGGGGAGGTCATCACTCAGGGCCTGTACCAGGGTGGTTTTGACTATCACTTGGCTATTAATGGCAAGTCCTTTGCTGCCCTCTGTGATCACTTTCCTGAGTATTTGCCAAAGGTTTTGCTGCGAGCCACAGTATTTGCACGCATGGCTCCTGACCAGAAAACCCAGCTAGTGAAGGAGTTGCAGAAACTTAACTACAAGGTGGGCATGTGTGGGGACGGGGCCAACGACTGCGGGGCCCTGAGAGCTGCTGATGTTGGGGTTTCTCTGTCTGAAGCCGAGGCTTCAGTCGCGTCACCTTTCACTTCCAAGACTGAAAACATCAGCTGTGTGCCGCTGCTTATCAGAGAGGGCCGGTGTTCTCTGGTCACCTCATTCAGTCTCTTTAGATACATGGCCAGTTACAGCCTCATTCAGTTCTGCGCTGTCCTCACCCTCTACACAGTGAGGACGAGGTTGTCCGACGTGCAGTTCTTGTTTTGTGACTTGTTTCTGGTGACGACACTGGCCATTGTGATGGGGAGAGGGGGCCCCAGTGACAAGCTGGACCCCTCCAGACCCTCAGCCAGTCTGCTGTCCCTGCCTGTGCTTGGCAGCCTCTTCATCCACACCTGCGTGATTGTTCTGGGCCAGCTGGCTGCGCTCTTCATCACCACCTCACAGGACTGgtacGTTCCAATCAATTCAACAAGGATTGGCGCAGCCAATCTGCCAAACATGGACGACACCAGTGTGTTTGCCTTGTCTGGTTTCCAGTACATCATCATGGCTGTGGTGGTCACCAAGGGATACCCTCACAAGAAACCCTTATACTACAATTGGATTTTCCTCTGTGTACTATTGATCCTCTTTGCCCTGATGACCTGGCTGGTGTTGAATCCTGCGCCTGCCCTTGAAATACTGAAACTGTACGACTTCTTTGATATGAATTTCAAAATGCTGCTCGTCGCTCTGGCTGCTCTTAACTtcctcatttgtttttttgtggagCTGCTGATAGATTTGGGTATCCTGAACTGTCTTCGGGCGCTGCGTGGGAGGCGCGAATCCAAGAAACAGTATAAACGTCTGAACATCCTTCTGTCTGAATCCCCCTCATGGCCACCCCTTAATCAAACCCTGTCACCCAGAGATTACACAGTCATCCAATTTAGCTAGCATCTGTTTGCCCCTCTGTTGGACACTGTCGTGACCCAAGCCAAAAGATGCTGTGGATGTCGGAGTTACATCCTCAACTTGATCAACAATACAAAGTCATGTTTACCTttgattaataaaaactatttttatttaaacta

Function

NR:

description
cation-transporting ATPase 13A2 isoform X1

GO: NA

KEGG:

id description
K13526 ATP13A2; cation-transporting P-type ATPase 13A2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801880.1 True 3746 mRNA 0.52 30 29783406 29804982

Neighbor

gene id symbol gene type direction distance location
ubiad1 ubiad1 coding downstream 44213 29734941 ~ 29739193 (-)
mib2 mib2 coding downstream 51496 29682789 ~ 29731910 (-)
ttll10 NA coding downstream 133041 29609909 ~ 29650365 (-)
LOC120559132 LOC102197101,LOC101463906,LOC102310392,LOC100702039 coding downstream 173986 29593048 ~ 29609420 (-)
LOC120559893 LOC104921444,LOC103367276,LOC104966657,LOC106952640,LOC103151253,LOC106934176 coding downstream 445808 29323865 ~ 29337598 (-)
LOC120559846 sdhb,LOC101478036,LOC102293590,LOC100705239,LOC102211954 coding upstream 1812 29806794 ~ 29810573 (-)
tmem240a tmem240,tmem240a,LOC108275582,LOC107593924,LOC107687438,LOC106572021 coding upstream 17890 29822872 ~ 29837527 (-)
bcas2 bcas2 coding upstream 41900 29846882 ~ 29850954 (-)
brpf3b LOC100699843,LOC106518910,LOC103372699,LOC104963634 coding upstream 123206 29928188 ~ 29946233 (-)
mapk13 LOC104963623,LOC104919509,LOC106518909 coding upstream 142924 29947906 ~ 29959771 (-)
LOC120559594 NA non-coding downstream 104602 29676371 ~ 29678804 (-)
G54038 ddost,LOC107687429 non-coding downstream 259944 29521790 ~ 29523462 (-)
G54006 NA non-coding downstream 393843 29388551 ~ 29389563 (-)
G54005 spen non-coding downstream 397554 29385123 ~ 29385852 (-)
G54001 spen,LOC102775881 non-coding downstream 403080 29377948 ~ 29380326 (-)
G54185 atad3a,LOC103366266,LOC105898932 non-coding upstream 9368 29814350 ~ 29815450 (-)
G54189 NA non-coding upstream 17538 29822520 ~ 29822817 (-)
G54272 NA non-coding upstream 95578 29900560 ~ 29902720 (-)
LOC120559738 NA non-coding upstream 691058 30496040 ~ 30500331 (-)
LOC120559660 NA non-coding upstream 814284 30619266 ~ 30619890 (-)
cdk11b LOC103366252,LOC101466870,LOC100697195 other downstream 17533 29752661 ~ 29765873 (-)
clcnk clcnka,LOC104952128,LOC102786725 other downstream 290431 29474503 ~ 29492975 (-)
LOC120559896 slc25a45 other downstream 427522 29350078 ~ 29355884 (-)
ajap1 ajap1 other downstream 754085 28971286 ~ 29029321 (-)
LOC120559779 LOC104918355,LOC103374204,LOC103385013 other downstream 1596879 28153182 ~ 28186527 (-)
tafa5l LOC102786421,LOC104919510,LOC100700110,LOC103384901,LOC106518908,LOC107086703 other upstream 166214 29971196 ~ 30072699 (-)
LOC120558955 LOC104919264,LOC102777709,LOC100695043,LOC102209489,LOC103373809,LOC103152775,LOC101470785,LOC106963186 other upstream 2487960 32292942 ~ 32323275 (-)
LOC120559593 plxnb1,LOC103373813,LOC107100289 other upstream 2786001 32590983 ~ 32666459 (-)
G54756 LOC107088573,LOC106566972 other upstream 2962375 32767357 ~ 32773486 (-)
G54834 NA other upstream 3075211 32880193 ~ 32887290 (-)

Expression


Co-expression Network