cpne5a


Basic Information

Item Value
gene id cpne5a
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 22653501 ~ 22725592 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801917.1
ATGCAGACAGGAGGGGTGGAGTTCACAGCTCTTACTTTTCAAACGCTGCTCTGGCAAAAGAGCTCATTCTTTGCCTGGTAAACAGCGGAGTGGGCTCTGATGCGTCCTGGCATGTGATCCCACTTTAGTTAAATCAATCGCCTCACTGCTGCAGCCTCCCAATAAACTTTCCATGCTGTTGCCCGTCCAATGGACAGCACTTAGGAGGTTTGTCTGGACCGTATCCGCTACTGCTCGCTCATCCGCTGCGCTCCGGCTCTCCGCCGTCGGCTCTCCAGGTTCATAGGGACTCACGCGGCTCGGGGAGCTGGCCCGGGTCTCCTGCACACATGGAGGGAGACGTTATGGACAAAGTGGAGGCCACGGCGACGGTCTGTGACTTTGACCCCATCAGTGGGAGCATCCCGGCCACCAAAGTGGAGATCACCGTGTCCTGCAGGGATCTCCTGGACCGAGACACTTTCTCCAAATCTGACCCATTGGTGGTGTTGTACACGCAGGGCGTCGAGTCCAAACAGTGGAGAGAGTTTGGGAGAACAGAGGTGATAGACAACACGCTAAACCCAGACTTTGTCAGGAAGTACATCCTGGACTACTTCTTTGAGGAGAAGCAGACCCTGCGCTTTGACGTGTATGACATTGATTCTAAAAGTCCAGATCTGTCAAAGCatCCTACCGACTTAAACGACTTCCTGGGACAGATCTACTGTACACTGGGAGAGATTGTGGGCTCACCTGCCAGTCGCCTGGAGAAACCTCTCGGTGGCATACCTGGGAAGAAATGTGGGACCATTATCTTGTCTGCTGAGGAGCTGGGAAACTGCAGAGATTATGCCACCATGCAATTCTGTGCCAACAAACTAGATAAAAAGGACTTCTTTGGAAAGTCAGACCCCTTCATGGTCTTCTACAGAAGCAACGAGGATGGCACGTTTACCATTTGCCACAAGACCGAAGTGGTGAAGAACACGCTGAACCCTGTGTGGCAGCCCTTCTCCATCCCTGTCAGAGCGCTCTGCAATGGAGACTATGATAGGACAATTAAAGTGGAGGTGTATGACTGGGACAGAGACGGGAGCCATGATTTCATCGGTGAATTCACCACCATTTATAAAGAGCTATGTCGGGGTCAGAACCAGATAAACGTCTACGAGGTGGTGAACGCcaagaagaaaataaagaaaaagagataCATCCACTCTGGGACGgtGTCCTTGTTGTCATTCAATGTGGAGTCAGAGCACACATTCCTGGATTACATCAAAGGAGGGACTCAGATTCACTTCACAGTGGCCATTGATTTCACTGCATCAAACGGAAATCCGTCCCAGTCCACTTCACTGCACTACATGAACCCGTACCAGATGAATGCCTATGCTATGGCCCTGAAGGCCGTGGGAGAGATCATCCAGGACTACGACAGTGATAAGATGTTCCCTGCCCTGGGATTCGGTGCTAAGCTGCCCCCTGATGGGAGGGTCTCCCACGAGTTCCCTCTGaaTGGCAACATTGAGAACCCGTACTGTAACGGCATGGAGGGGATTCTCGAAGCTTACCATCAAAGCCTTAAGACGGTTCAGCTGTATGGACCCACCAACTTTGCTCCTGTTGTTAATCATGTGGCAAGTTATGCAGCAGCAGTGCAGGACGGGTCTCAGTACTTTGTGCTGCTCATCATCACTGATGGCGTCATATCAGACATGGCTCAGACCAAGGAGGCCATAGTGAATGCAGCCAAGCTCCCCATGTCTATCATCATTGTTGGAGTTGGCCAAGCTGAGTTTGATGCCATGATTGAGCTGGATGGTGATGACATCAGGATTTCCTCGCGGGGGAAGTTGGCAGAGAGAGATATTGTACAGTTTGTCCCATTCAGAGACTACATGGACCGCACAGGCAACCACGTGCTGAGCATGGCGCGGCTGGCTAAAGACGTACTGGCCGAGATCCCTGACCAGCTGATCTCCTACATGAAGAGCAGAGGCATTAAACCTAACCCTGTCCCAGCGACTTACTCGTTTGGGGATCAACCCCAGACCAACCCCGTCTGAGACCCACACACAGTTCCGCATTGGGTTGGGGCAGGGTCGTGGTTGAGGGGTACCAGCCTTCACAACCATCTTTTGGGAAGAAATGGAAACGCTTTTAAGGCCCTTTCGTAAATATTATTTCGGCTAAACAAAAAAGTAGATGAGACTCCATTTTGTTTTGGAGAAATACAACTGCTTTGGGTGAACAAGCTGATGATCAGGgagttttttctctctgtggaTGAGAGCACTGAGAGGAGCTCGGTGTAGAAGGAGGTTTTAGTTGTTCGCTGTCAAACCTGTCAGTGGTGATGTAATGGATAGCAAGTAAACCCGTAGAGAGAGCCTGTATGAAGGCATAAATATATTAGAATGTGCCAGTGTGTATCATGTTTGTGATACCTTTTGGAATTGGTGTGTGTTATACTAGGAAAACATATGTatactaatttatttatttatttattgcagaaataatttattaataggGTGGGGATTAAAGTCATATTTTCCCTGTAGTTTTCAATCTTATATTTTGTGACTAGTGTAATAAAAAAGATCCCCATTTCTACTTTGATAAGCACTGTAATATAAAAGCATGTGATAAGACCTATTCAGCAGCTAATGAATCATTTTCACTGATGGATCATTTTTGTTTGTAAGCCGTTATGTAGAGGACCTGCTGTGAGCTGTTGCCATACTGATTTTCCAGCTCCATGTCTTATACGTATTTCTAATATTTATATTAACAGTATGCACTAATTACTGTCCAAATGAAAAGCACAAAGATTACAACGTTAATAAGCTCAAAACCATTATCGCAAAGAAAATGAAAGGACCCCACATTATGTTCTCAACACGGCTTTAGCATCAGTTCAAACCAGATGAAACATTGAATGTTTATAAAGAAATGActatac
>XM_039801918.1
AATGCAGACAGGAGGGGTGGAGTTCACAGCTCTTACTTTTCAAACGCTGCTCTGGCAAAAGAGCTCATTCTTTGCCTGGTAAACAGCGGAGTGGGCTCTGATGCGTCCTGGCATGTGATCCCACTTTAGTTAAATCAATCGCCTCACTGCTGCAGCCTCCCAATAAACTTTCCATGCTGTTGCCCGTCCAATGGACAGCACTTAGGAGGTTTGTCTGGACCGTATCCGCTACTGCTCGCTCATCCGCTGCGCTCCGGCTCTCCGCCGTCGGCTCTCCAGGTTCATAGGGACTCACGCGGCTCGGGGAGCTGGCCCGGGTCTCCTGCACACATGGAGGGAGACGTTATGGACAAAGTGGAGGCCACGGCGACGGTCTGTGACTTTGACCCCATCAGTGGGAGCATCCCGGCCACCAAAGTGGAGATCACCGTGTCCTGCAGGGATCTCCTGGACCGAGACACTTTCTCCAAATCTGACCCATTGGTGGTGTTGTACACGCAGGGCGTCGAGTCCAAACAGTGGAGAGAGTTTGGGAGAACAGAGGTGATAGACAACACGCTAAACCCAGACTTTGTCAGGAAGTACATCCTGGACTACTTCTTTGAGGAGAAGCAGACCCTGCGCTTTGACGTGTATGACATTGATTCTAAAAGTCCAGATCTGTCAAAGCatGACTTCCTGGGACAGATCTACTGTACACTGGGAGAGATTGTGGGCTCACCTGCCAGTCGCCTGGAGAAACCTCTCGGTGGCATACCTGGGAAGAAATGTGGGACCATTATCTTGTCTGCTGAGGAGCTGGGAAACTGCAGAGATTATGCCACCATGCAATTCTGTGCCAACAAACTAGATAAAAAGGACTTCTTTGGAAAGTCAGACCCCTTCATGGTCTTCTACAGAAGCAACGAGGATGGCACGTTTACCATTTGCCACAAGACCGAAGTGGTGAAGAACACGCTGAACCCTGTGTGGCAGCCCTTCTCCATCCCTGTCAGAGCGCTCTGCAATGGAGACTATGATAGGACAATTAAAGTGGAGGTGTATGACTGGGACAGAGACGGGAGCCATGATTTCATCGGTGAATTCACCACCATTTATAAAGAGCTATGTCGGGGTCAGAACCAGATAAACGTCTACGAGGTGGTGAACGCcaagaagaaaataaagaaaaagagataCATCCACTCTGGGACGgtGTCCTTGTTGTCATTCAATGTGGAGTCAGAGCACACATTCCTGGATTACATCAAAGGAGGGACTCAGATTCACTTCACAGTGGCCATTGATTTCACTGCATCAAACGGAAATCCGTCCCAGTCCACTTCACTGCACTACATGAACCCGTACCAGATGAATGCCTATGCTATGGCCCTGAAGGCCGTGGGAGAGATCATCCAGGACTACGACAGTGATAAGATGTTCCCTGCCCTGGGATTCGGTGCTAAGCTGCCCCCTGATGGGAGGGTCTCCCACGAGTTCCCTCTGaaTGGCAACATTGAGAACCCGTACTGTAACGGCATGGAGGGGATTCTCGAAGCTTACCATCAAAGCCTTAAGACGGTTCAGCTGTATGGACCCACCAACTTTGCTCCTGTTGTTAATCATGTGGCAAGTTATGCAGCAGCAGTGCAGGACGGGTCTCAGTACTTTGTGCTGCTCATCATCACTGATGGCGTCATATCAGACATGGCTCAGACCAAGGAGGCCATAGTGAATGCAGCCAAGCTCCCCATGTCTATCATCATTGTTGGAGTTGGCCAAGCTGAGTTTGATGCCATGATTGAGCTGGATGGTGATGACATCAGGATTTCCTCGCGGGGGAAGTTGGCAGAGAGAGATATTGTACAGTTTGTCCCATTCAGAGACTACATGGACCGCACAGGCAACCACGTGCTGAGCATGGCGCGGCTGGCTAAAGACGTACTGGCCGAGATCCCTGACCAGCTGATCTCCTACATGAAGAGCAGAGGCATTAAACCTAACCCTGTCCCAGCGACTTACTCGTTTGGGGATCAACCCCAGACCAACCCCGTCTGAGACCCACACACAGTTCCGCATTGGGTTGGGGCAGGGTCGTGGTTGAGGGGTACCAGCCTTCACAACCATCTTTTGGGAAGAAATGGAAACGCTTTTAAGGCCCTTTCGTAAATATTATTTCGGCTAAACAAAAAAGTAGATGAGACTCCATTTTGTTTTGGAGAAATACAACTGCTTTGGGTGAACAAGCTGATGATCAGGgagttttttctctctgtggaTGAGAGCACTGAGAGGAGCTCGGTGTAGAAGGAGGTTTTAGTTGTTCGCTGTCAAACCTGTCAGTGGTGATGTAATGGATAGCAAGTAAACCCGTAGAGAGAGCCTGTATGAAGGCATAAATATATTAGAATGTGCCAGTGTGTATCATGTTTGTGATACCTTTTGGAATTGGTGTGTGTTATACTAGGAAAACATATGTatactaatttatttatttatttattgcagaaataatttattaataggGTGGGGATTAAAGTCATATTTTCCCTGTAGTTTTCAATCTTATATTTTGTGACTAGTGTAATAAAAAAGATCCCCATTTCTACTTTGATAAGCACTGTAATATAAAAGCATGTGATAAGACCTATTCAGCAGCTAATGAATCATTTTCACTGATGGATCATTTTTGTTTGTAAGCCGTTATGTAGAGGACCTGCTGTGAGCTGTTGCCATACTGATTTTCCAGCTCCATGTCTTATACGTATTTCTAATATTTATATTAACAGTATGCACTAATTACTGTCCAAATGAAAAGCACAAAGATTACAACGTTAATAAGCTCAAAACCATTATCGCAAAGAAAATGAAAGGACCCCACATTATGTTCTCAACACGGCTTTAGCATCAGTTCAAACCAGATGAAACATTGAATGTTTATAAAGAAATGActatac

Function

NR:

description
copine-9-like isoform X2

GO: NA

KEGG:

id description
K24523 CPNE5_8_9; copine 5/8/9

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801917.1 True 2950 mRNA 0.47 21 22653502 22725592
XM_039801918.1 False 2936 mRNA 0.47 20 22653501 22725592

Neighbor

gene id symbol gene type direction distance location
srpk1a srpk1 coding upstream 26342 22611970 ~ 22627159 (+)
mapk14a LOC103368176,LOC104964410,LOC104939458 coding upstream 42705 22597224 ~ 22610796 (+)
elapor1 kiaa1324 coding upstream 57299 22585431 ~ 22596202 (+)
smc5 smc5 coding upstream 71916 22565944 ~ 22581585 (+)
LOC120558833 NA coding upstream 107661 22538280 ~ 22545840 (+)
adora1b adora1,LOC103368126,LOC101166301,LOC102200284,LOC101484151 coding downstream 66073 22791665 ~ 22795982 (+)
mmp9 mmp9 coding downstream 81331 22806923 ~ 22811471 (+)
LOC120559125 NA coding downstream 86278 22811870 ~ 22823643 (+)
LOC120559530 LOC104964419,LOC104927136 coding downstream 101039 22826631 ~ 22828548 (+)
slc16a4 slc16a4,LOC102787232 coding downstream 122393 22847985 ~ 22877262 (+)
G52272 lhfpl5,LOC102777996 non-coding upstream 22357 22630594 ~ 22631144 (+)
G52185 NA non-coding upstream 169400 22480543 ~ 22484101 (+)
G52179 NA non-coding upstream 177187 22474230 ~ 22476314 (+)
G52054 NA non-coding upstream 306855 22340383 ~ 22346646 (+)
G52064 NA non-coding upstream 398528 22254295 ~ 22254973 (+)
G52287 NA non-coding downstream 281 22725873 ~ 22726131 (+)
G52288 NA non-coding downstream 1005 22726597 ~ 22729555 (+)
G52294 NA non-coding downstream 24471 22750063 ~ 22762554 (+)
G52333 NA non-coding downstream 109206 22834798 ~ 22847296 (+)
G52342 rbm15 non-coding downstream 158457 22884049 ~ 22888687 (+)
LOC120559933 NA other upstream 90980 22562154 ~ 22562521 (+)
G52210 LOC104964406,LOC106525460,LOC105931770 other upstream 93173 22556329 ~ 22560328 (+)
LOC120558641 LOC103363734,LOC104967523 other upstream 558611 22090197 ~ 22094890 (+)
avpr2aa avpr2,LOC105897269 other upstream 592856 22046763 ~ 22060645 (+)
G51926 NA other upstream 749424 21903542 ~ 21904077 (+)
lamtor5 lamtor5,LOC102787529 other downstream 116452 22842044 ~ 22846938 (+)
atxn7l2b kcnc4 other downstream 265660 22991252 ~ 23068479 (+)
tmem201 tmem201,LOC102777799 other downstream 1020773 23746365 ~ 23765165 (+)
ctnnbip1 ctnnbip1 other downstream 1065855 23791447 ~ 23814406 (+)
LOC120559118 LOC102791662 other downstream 2215203 24940795 ~ 24945320 (+)

Expression


Co-expression Network