LOC120559885


Basic Information

Item Value
gene id LOC120559885
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 33271132 ~ 33294480 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801962.1
GTCATGAGCTGTGGCGACGATGTGgttcctccttcttctcctttACACTGCTCACATTGAGGCGGTGATCGCCCAAAGCACAAGTAAGAATAGGCTGATTCTGAAGAGTGGAAGCAACCCATGTGAAGGCTACATTGAAATCTACCATGAAGGCGAATGGGGCCATGTTGGAGAGAAATACTGGACCGAGAACACTGACAAAGTGGTGTGCAGGAGCACTCACTGTGGGGAACCTGTAAAGAACAGCACAGCAGAGATTGCGTCAAGGCCCGATGAGTCGGTGTTGCTCAATGATGTGAGCTGCACTGGAAATGAGGACCATCTGTGGAAATGTATTCATCCTGGTTTTAAAGTCAGCACTCAGCGAACGGGAACTCAGAGAAAGATTAAATGTTCAAATAACATCACATTGAGCCTGGATGGATTTAAATGTGCGGGAGCTGTCAAGTACTCCACAGATGGGGGACAAAATGATTCAGGTTACTTTTGCGGTGAAACAGGCTGGGGACAAAAGGAAGCCAATCTTTTGTGTAAAAATCGCAACTGTGGTACATCCAAGGATATTTTGAACGACTGGATGGtttgggagaaattcccacagtcAAAGAAGATGATGATCAACTGTTCAGACCTTCAAAAAACAGATAATCTGTGGCAGTGTGTCACTGGGGAATCAAGATCGTGCAAAAAGCCTGCTTCTGTCATatgcacagGTCATGACAAACTGCGACTCAAAGGAAACGCATCAAATGTGTGTTCTGGGAGGCtggaaaaagaggaaaatggCAAGTGGAATCCTGTAAAAACAATCAACACCAATCCTGATGATTGGTGCAAGCAAATGCACTGTGGTACGAAGGTCTCCCACAGCGAGGACGACAACGGCACACAGCTGACATGCTCAGACAATGTTACAGTACTTCTGATGGATGGTAACAAACGCAGCAACTGCTACGGTGAAGTTCATATTCAAAGGAATGGTAAAAGTCAGGCCGTGTGTGGGACCGCCTTGACCTGGACCGAGAAGGATGCTGAAGTGGTTTGCAGGGAGCTAAACTGCGGCAGCGTgagttttaaataaaatggaaaaacattTAGGAGAGAAGGGATAATGGACAATGTGAAATGCTCAGGCGATGAACCCTCACTGTGGCACTGTAGAGCCAAGCATTCCAAGAATGAATGTTCCTCCGTTGCTTACGTAGTCTGTGCAGATAGTATATCAGTGAAATTGTTGGACGGTCCTGGTAAATGTGCTGGGAGAGTGGAGGTCCAGCATGAGGGCAAATGGCACAGGGTCAATCAAGCTGGATGGACAGATACCAATTCAGACACTGTCTGCAAACAACTGAACTGTGGGAGTAGAAGAGTTCTCACCACTCCTGAAAAATTCAGCCAGGGTTCAAATGGTGTTCTACACAAAACTGTAGATTGCAAGACAGACGCCAAACATATATCTGAGTGTATTCCAGCAGCTAACTTAAACGACCAACCCAGGGATCTGGTGGCAGTAGGAATAACCTGTGAGGAGCACAAGGTGGTATTTCTGAAAGGAGATAGTTCCTGTTCTGGCATGGTGGGGATAGAGCACGACACCAAAACCTACTGGCTCTCCGGCTCTAACGAGACATGGGACCAAAACTCTGCCGACACTGTGTGTCGACAGATGCACTGTGGGAGTGCCTTGAACCATATCTCCATCCCTAGTGCTGATTTGGTGAAAGATGTTTGGAATGTATCTTACAGCTGCTTATCCAACTCCACATCTCTGTTGGACTGTGAAAATACAACACTGCCATCAAACCACAGTGACACTATTGCCACTGTGGCATGCTCAGGAAAAATCGAGGTGAACCTGACCAATGAGTGTTGGGGGTATGTCAATGTTTGTGCAAATGGAGAGTGTGGAAATGTGTGTGCAGACACCTGGACAGACAAAAAGTATGCGATGCTGTGTAAAGACCTGGGCTGTGGGGACAAAGTCCTAGAGACCAACTCCAAGCTCCAGCCCAAGGCCAATACTAAAGGGAGTAAGGTGCTCTTTACGGGTTTGCACACTACAAACAACATGAACAACCTGAGCCAGAGCATCttcattaaaaatgaaaataattacgTCTGTAACCCTAGCCAAGTCTATGTTGTTTGCTCAGGTAGTTTCAAGTCCAAATTTTCTTCTTCCAGAGACAAATGTTTTGGAAATGTGTTGGTGGAGTATGAAGGCCAGTGGCTCCCAGTCTGCAAAAAAGCTTTTGAAAACATCAACACACAAAAGGCCATCTGTGGGGAACAATGTGGTCTGGCTGGAGAACCCATTCCTTACTTCGGACCTGAATCAACAGAGGGTCGTGTCATTGAAAAAATAGAGTGTGGGGATGACGCAAAATCAATAACAGCATGCAAGGTCAAAACCGGTCCTCCGAGTACCTGCTCACAACGTGGTGGTCTTCAATGCTCCAACTGGAGTAAGATAAGGCTGACTGGAGGAAACGCCTGTAATGGAGATGTGTCTGTTCGCTCGCAGAACGGAGTCAGTGCTGTTTCCACTGACGGTTGGACAGAAAGTGAGGGGCAGATACTTTGCCGGGATCTGGAGTGTGGCAATTTCATGTCATACAGAACAAGGACATCGGACAGTACCTCGACCACAAGCTTCAGCTGTGCAGGTGTGAACAATTCCAAAAACATCTGGGAATGTGAAAAGAATACATCGGAGAAACAGAAGCAGCTCGTTCTCGAATGTCAAGATGAGCCCAAGGTCACCCTATCAAACAAATGTCATGGTGAATTGAAGATAAATGGTGTTGCGGTGTGCGCCACTGACTGGAAAAACGAATATTCACAAAGGGTTTGCCAAGATCAGGATTGTGGCATAGCTATTGCTGGTGTACCTTATGAGAATCAAGCAAATGGAAATTACTACCATGTCAGCTGTGAGAACGACCATTATAAACTTGGCCAGTGCAAGAGATACAAGGGAAAGTGtcaaaaagaaggaaaagaaggaaCACTGGTGTCTGTTTACTGTGTTCacaatGTTAAGTTTAACACCACCCAAAAATGTGGAGGTCAGATTGAAATCAACTATGGACGTGGATGGAAAAAAGTGTGTCCCTTGAATTCATTCTCCAAGAAACATAAGGAGATGCTGTGTAAAGAACTTAAAGATTGTGGTCCTCTTAATGAAAGCATAACTTACAGAGAGAAAAAGAAAGATAGTAACTTGGAAATATCGCTGGAGTGCAACAACGATCAGAACATCACATACTGTGTCAGCCAAAAACCTTGTAAAGATGCCCAACCAGCTGAGATCTACTGTGACGGGTATGAGCCCCCAGATCCACCAATCCCTGTTCCACCACCGCCCAACGTACTGTATATCCTCCTGGGAGTAGGatttcttctggttctggtcaTACTGATTGTTGTATTTGTACGCATCTGCATTGTCaagaaagccaaaaaaaaagccatgaaTTTCTCGTTGAGAAAGCTGTCAAGAACAGAAGTGGAGTTTGAAAGTGGAGACTATGAAGATGTCAAAGACAATGAAATGGAGGACTTTAGTCTTGGCAGATTCAAATCAGAGACTGAAGTCATCACGGAGAACGACGCACGGAGCACTTCCTCTTTTCCCTACGATGATATTGATGAGGCTCAACCCCTGACCTCTCAGGTCGCCACTGATGCTGACTCAAGAAACAACATCAATCAGGGTGACCCCGATGAAAGCACAGATGGGGTGACCTACGAGGTGGACGACCCGCAGGAGAATTACGATGACATCGAAGCCTGCCCTGAAATCACTCAAACCGAGGCTGAAGTCCACAACAGCCCCCAAACAACACCTGAAGGTGACACAGAGGCACCTCAAGGATTAGTGCAGGGGGATGAGGACTACCTAGTGCCAGGTCAGGACGGGTGAGCCAAAACTAGGTTTAAAGGCTacagaaatacatttcaatCTGGAAAAGTAGACCCCCCCGAAAACTTGGCTACCATTTACAAAAACATActcacaaagtcacaaaattaTAATCAAACAACATTACCGTAGAAAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801962.1 True 4062 mRNA 0.46 19 33271132 33294480

Neighbor

gene id symbol gene type direction distance location
LOC120559907 NA coding downstream 30704 33221464 ~ 33240428 (-)
pim1 pim1,LOC102786254,LOC100704168,LOC102192917 coding downstream 198054 33068885 ~ 33073078 (-)
zgc:103759 LOC104952901,LOC101466673,LOC100706292,LOC102192048 coding downstream 249788 33016489 ~ 33021344 (-)
arhgap4b LOC103371877,LOC102798993,LOC102215860 coding downstream 256283 32972595 ~ 33014849 (-)
fam50a fam50a coding downstream 305368 32950105 ~ 32965764 (-)
LOC120559567 klhdc8b coding upstream 29325 33323805 ~ 33470306 (-)
si:dkey-32e6.3 NA coding upstream 214208 33508688 ~ 33524809 (-)
usp19 NA coding upstream 231375 33525855 ~ 33554185 (-)
lamb2l LOC103362005 coding upstream 324143 33618623 ~ 33684274 (-)
si:rp71-17i16.5 LOC103384699,LOC104952370 coding upstream 402367 33696847 ~ 33710767 (-)
LOC120558525 NA non-coding downstream 87814 33173866 ~ 33183318 (-)
G54735 NA non-coding downstream 582494 32688205 ~ 32688638 (-)
G54734 NA non-coding downstream 584518 32683360 ~ 32686614 (-)
G54733 NA non-coding downstream 588616 32682162 ~ 32682516 (-)
G54731 NA non-coding downstream 595667 32675265 ~ 32675465 (-)
LOC120558313 NA non-coding upstream 13651 33308131 ~ 33308924 (-)
G54922 NA non-coding upstream 24340 33318820 ~ 33319024 (-)
G54947 NA non-coding upstream 210333 33504813 ~ 33507223 (-)
G54949 NA non-coding upstream 212954 33507434 ~ 33508423 (-)
G55034 LOC103362008,LOC101472191,LOC102782874,LOC105937849,LOC100703845 non-coding upstream 455809 33750289 ~ 33757122 (-)
zgc:158296 NA other downstream 299969 32966635 ~ 32971163 (-)
G54834 NA other downstream 383842 32880193 ~ 32887290 (-)
G54756 LOC107088573,LOC106566972 other downstream 497646 32767357 ~ 32773486 (-)
LOC120559593 plxnb1,LOC103373813,LOC107100289 other downstream 604673 32590983 ~ 32666459 (-)
LOC120558955 LOC104919264,LOC102777709,LOC100695043,LOC102209489,LOC103373809,LOC103152775,LOC101470785,LOC106963186 other downstream 947857 32292942 ~ 32323275 (-)
lamb2 NA other upstream 261320 33555800 ~ 33614940 (-)
G55124 fam110a,LOC104960682 other upstream 729538 34024018 ~ 34127495 (-)
G55131 NA other upstream 793490 34087970 ~ 34093118 (-)
ntsr1 ntsr1,LOC103361890,LOC104959625 other upstream 942086 34236566 ~ 34291069 (-)
LOC120559165 NA other upstream 1975416 35269896 ~ 35277854 (-)

Expression


Co-expression Network