LOC120559893 (LOC104921444,LOC103367276,LOC104966657,LOC106952640,LOC103151253,LOC106934176)


Basic Information

Item Value
gene id LOC120559893
gene name LOC104921444,LOC103367276,LOC104966657,LOC106952640,LOC103151253,LOC106934176
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 29323865 ~ 29337598 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801972.1
AGCATCGTGACCACAACAGGCTCTTGTTCTTCCTGTTTACAAATGTGAAACTGAAGTTCTGTCAGCTGGAGGTGGAGAAAGCAAAAGCTCGCAGGAATGTAAGCTCCAGGCTGGTCCTCGAGGAAATGGAAGAGATAAGTCCTTTGTTGGGCAACCAGATTTCTGGGCAACCACATGAGGACCCAGACCTTCTGTCTCCAAACCTGAGGCCGAGACACCAGGAACTGATCCCGACACCATGTGGACCGATAAAGCCCTGGTCGGAGCTATCATGTCTGCTCAAGCTCTACTTCTGCTTCACCATAGCGTCTCTGCTGGCGCTGCTCGGCCTCACCCTGTTCAGCATCTACAAGCAGCACATGGACACGGATGCATCTGATGAGGACAACTTCACTGTGTCTCTCATCCTGTTGGTTGGAATCTTGTTCTGCATCTACTACATCAGCCGGGGTGTGTTGCAGGAGAACAGACAGGAGCTGGTGGTGTTTGTGCTCAGCGTGTTGATGTTGATGGTTCGATCTGTGGTCAACTTCTCTGTGCTAGAGCCAAAGAGCAAGCAGGAGCTGCTGATTCGCTTTGTGTGCATCATGTGTCTGGGCGTGATCCACGTCTTCTGCACCACGCTGCTCATCCAGAGGCCCAACAGGATGGCATTCCGTGTGGGCGGGGCCTTGGAGAGCCTCCAGGAGCAATACTTTCTGCTCAACCTGTGTTTCTCCACGGTGACCTTTGATCTTCAGGCTCAGttgtgtctgtgtatcgTGATCACCACGTCGGACTCGGCCATGTCTGCTCAAAACAGCATCATCCTGGGCGTCGGAGTGGTGTGGGCCTGCCTGACCGCCGCCGTTGGGGCTGTTGCAgTTTTAAAGGAAGCCAAGAACTTAGTTTGGGTCTTCATGTTGCTGAACCTTCCTCAACTAGCCTTCTTTGTTTATCTGATTTACACGGTGGTGTTGACATGGTTCCAGGACGGCACGTACACCCTGGAGGCAGCTGCCATCACCGGAGCTTTGATTTCACTGGTGATTAAAGTGGTTTTATTCTGGGGCCTCATCAGACTGGTGAACAGCTTCGGCCAAGGCCTGAGGGAGAGGAtgtttgCACCCAGCAAGTGACAAAACATCCAGTGGGGGTGGACCAAGGACAAAGCTGCATGCTGAGGGCCTAACATTGCTGCTCACTATGGAGTTTTATTCAACGCACAACTCCACCAATCAGTCAGCTGACTTCTTAATTTTTGCCTAAAGTGCTTTTATACtgtatagatttttattttagctAACACTCCTTTGTCAGTGTGCCTATTTCCAGGATTTAAAGCATCACAACTGAAATTACATCAAATGCCTTTTGTAGATTAGATTCATAAtggtttttaatttaaaaaactttttttaaagtggccaACGTCCTCCATTTCAAAAGGAGCTTTGATCTTAAAggtctttttttgtttccttcctGTAAATTACATTCAATGTTGACTGACTTTGCTTTTTGAAATTGTAATTGTGAAACTTAAACTTGTGATTTGCATTGTCTAAATTGCTCTTGGGCAACACTGGAATGTTTTTACTTACCGGAaacttgtttttattctttctctTTCGCACCTTAATGCACTTACTCAagtctttttttcattcaaggttcttaataaaatatcaaaacaaga

Function

NR:

description
PREDICTED: uncharacterized protein LOC104921444

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801972.1 True 1678 mRNA 0.46 9 29323865 29337598

Neighbor

gene id symbol gene type direction distance location
gabrd gabrd,LOC102778860 coding downstream 143174 29158029 ~ 29180691 (-)
LOC120559029 LOC102787320,LOC102195592,LOC100705795,LOC102314501 coding downstream 169640 29150403 ~ 29154225 (-)
dffb dffb coding downstream 805903 28510901 ~ 28517962 (-)
b3gnt7l LOC103356136,LOC104946517,LOC101486029 coding downstream 820960 28500573 ~ 28502905 (-)
LOC120558751 lrrc47 coding downstream 865294 28454908 ~ 28458571 (-)
LOC120559132 LOC102197101,LOC101463906,LOC102310392,LOC100702039 coding upstream 255450 29593048 ~ 29609420 (-)
ttll10 NA coding upstream 272311 29609909 ~ 29650365 (-)
mib2 mib2 coding upstream 345191 29682789 ~ 29731910 (-)
ubiad1 ubiad1 coding upstream 397343 29734941 ~ 29739193 (-)
atp13a2 NA coding upstream 445808 29783406 ~ 29804982 (-)
G53972 gnb1,gnb1b,LOC107385217,LOC103044197,LOC106516123,LOC107666091 non-coding downstream 29704 29250963 ~ 29294161 (-)
LOC120559849 NA non-coding downstream 255966 29050512 ~ 29067899 (-)
G53886 NA non-coding downstream 355790 28964643 ~ 28968075 (-)
G53881 NA non-coding downstream 402224 28921431 ~ 28921641 (-)
G53851 NA non-coding downstream 715291 28608269 ~ 28608574 (-)
G53994 NA non-coding upstream 10760 29348358 ~ 29349210 (-)
LOC120558378 NA non-coding upstream 25430 29363028 ~ 29373248 (-)
G53997 NA non-coding upstream 33749 29371347 ~ 29372824 (-)
G54000 NA non-coding upstream 37421 29375019 ~ 29375422 (-)
G54001 spen,LOC102775881 non-coding upstream 40350 29377948 ~ 29380326 (-)
ajap1 ajap1 other downstream 294544 28971286 ~ 29029321 (-)
LOC120559779 LOC104918355,LOC103374204,LOC103385013 other downstream 1137338 28153182 ~ 28186527 (-)
LOC120558759 NA other downstream 1393350 27845264 ~ 27930515 (-)
xpc xpc other downstream 1663219 27644783 ~ 27660646 (-)
hyal3 LOC103359396 other downstream 2123954 27189048 ~ 27199911 (-)
LOC120559896 slc25a45 other upstream 12480 29350078 ~ 29355884 (-)
clcnk clcnka,LOC104952128,LOC102786725 other upstream 136905 29474503 ~ 29492975 (-)
cdk11b LOC103366252,LOC101466870,LOC100697195 other upstream 415063 29752661 ~ 29765873 (-)
tafa5l LOC102786421,LOC104919510,LOC100700110,LOC103384901,LOC106518908,LOC107086703 other upstream 633598 29971196 ~ 30072699 (-)
LOC120558955 LOC104919264,LOC102777709,LOC100695043,LOC102209489,LOC103373809,LOC103152775,LOC101470785,LOC106963186 other upstream 2955344 32292942 ~ 32323275 (-)

Expression


Co-expression Network