LOC120559907


Basic Information

Item Value
gene id LOC120559907
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 33221464 ~ 33240428 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801991.1
GTCATGAGCTGTGGCGACGATGTGgttcctccttcttctcctgcACACTGCTCACATTGAGGCGGTGATCGCCCAAAGCACGAGTGAGAATAGGCTGATTCTGAGGCATGGAAGCAGCCCATGTGAAGGCTACATTGAAATCTACCATGAAGGCGAATGGGGCCATGTTGGAGAGAAATACTGGACCGAGAACACTGACAAAGTGGTGTGCAGGAGCACTCACTGTGGGGAACCTGTGAACTGCACATCAGACACTGTGTCATGGGCCATTGAGCCGATGTTGCTCAACGAAGTGAAGTGCAATGGAAAGGAGGACCATCTGTGGAACTGTGAACATCCTGGTTTTAAAGTCAGCAGTTCCAAAAAGAAAATTCAGAGAAAGATCAAATGTTCAAATAACATCACAATGAGCCTGGATGGATTTAAATGTGCGGGAGCTGTCAAGTACTCCACAGATGGGGGGCTAACTGATTCAGGATACTTTTGCGGTGATACAGGCTGGGATACAAAAGAAGCCGATCTTTTGTGTAAAAACCTCGACTGTGGTACAACCGATGAGATTCCAAAGGACTGGATGGTTCTGAACAAATTCCAAGAGACGACAACAAAGAAGATGACGATCAAGTGTTCAGGCTTTGGAAAAATAGATAATCTGTGGCAGTGTGTCACTGGGGAATCAAGATCGTGCAAAAAGCCTGCTTCTGTCATatgcacagGTCATGACAAACTGCGACTCAAAGGAAACGCATCAAATGTGTGTTCTGGGAGGCTGGAAATAGAGGAAAATGGCAAGTggaatcctttaaaaaaaaaaaataattctgatGATTGGTGCCAGCAAATGCACTGTGGTACGGAGGCCTTCCACAGTAAGGGCGACAACGGCATACAGCTGACATGCTCAGACAATGTTACAGTAGTTTTGAAGGACAGTGACAAACCCAGCACCTGCTACGGTGAAGTTCATATTCAAAGGAATGGTAAAAGTCAGGCCGTGTGTGGGACCGCCTCGACCTGGACCAAGAAGGAGGCTGAAGTGGTTTGCACGGAGCTAAACTGCGGCAGCGTGATTATTTACAAGGCGAAGTCAGTAAGGGGAGAAGGGATAATGGACAATGTGAAATGCTCAGGCGATGAACCCTCACTGTGGCACTGTAGAGCCAAGCATTCCAAGAATCAATGTTCCTCCGTTGCTTACGTAGTCTGTGCAGATAGTATATCAGTGAAATTGTTGGACGGTCCTGGTAAATGTGCTGGGAGAGTGGAGGTCCAGCATGAGGGCAAATGGCACAGGGTCAATCAAGCTGAATGGAAAGGTACCAATTCAGACACTGTCTGCAAACAACTGAACTGTGGGAGTAGAAGAGTTCTCACCACTCCTGAAAAATTCAGCCAGGGTTCAAATGATTTTCTACGCAAAACTGTAAAATGCAACCCAGACGCCAAACATATATCTGAGTGTATTCCAGAAACTAACTCAAACGACCAAACCAAGGATCTGGTGGCAGTAGGAATAACCTGTGAGGAGCACAAGGTGGTATTTCTGAAAGGAGATAGTTCCTGTTCTGGCATGGTGGGGATAGAGCACGACACCAAAACCTACTGGCTCTCCGGCTCTAACGAGACATGGGACCAAAACTCTGCCGACACTGTGTGTCGACAGATGCACTGTGGGAGTGCCTTGAACCATACCTCCATCCCTAGTGCTGATTTGATGAAAGATGTTTGGAATGTATCTTACAGCTGCTTATCCAACTCCACATCTCTGTTGGACTGTGAAAACACAACACTGCCATCAAACCACAGTGACACTATTGCCACTGTGGCATGCTCAGGAAAAATCGAGGTGAACCTGACCAATGAGTGTTGGGGGTATGTCAATGTTTGTGCAAATGGAGAGTGTGGAAATGTGTGTGCAGACACCTGGACAGACAAAAATGATGCGATGCTGTGTAAAGACCTGGGCTGTGGGGACAGTGTCCTAGAGACCAAAGCCAACACTAAAGGGAGTAAGGTGCTTTTTAAGGGTTTGCACACTACAAACAACATGAACAACCTGAGCCAGAGCATCTTCATTAAAAATGATGAAAACGATTACATCTGTAAACCTCGCCAAGCCTATGTTGTTTGCTCAGGTAGTTTCAAGTCCAAATTTTCTTCTTCCAGAGACAAATGTTCTGGAAATGTGTTGGTGGAGTATGAAGGCCAGTGGCTCCCAGTCTGCAAAAAAGCTTTTGAAAACATCAACACACAAAAGGCCATCTGTGGGGAAGAATGTGGTCTGGCTGGAGAACCCATTCCTTACTTCGGACCGGAATCAACAGAGGGTCGTGTCATTGAAAAAATAGAGTGTGGGGATGACGCAAAATCAATAACAGCATGCAAGGTCAAAACGGGTCCTCCGAGTACCTGCTCACAACGTGGTGGTCTTCAATGCTCCAACTGGCGTAAGATGGAGCTGACTGTAGGTGTGGATATGGCCTGTAGTGGAGCTGTGTCCGTTCTCTCAAAGAACGGAACGAGTGCTGTTTCCGTTAAAGATTGGACAAAAAAAGAGGGGGATGTGCTTTGCCAGAATCTGGAGTGCGGCTATTTCAACTCAAGTGGGACAGCTACATCGGCTATTAGCTTGACCACAAGCTTCAGCTGTGCAGGTGTGAAGGATCCAAAAAGCATCTGGGAATGTGAAAATCAAACATCGGACAAACAGAAGCAGCTCTTTCTCAAATGTCAAGATGAGCCCAAGTTCACCCTATCAAACACATGTCATGGTGAATTGAAGATAAATGATGTTGCGGTGTGCGCCACTGACTGGAACGATGCATATTCAGACATggtttgcagagaaaagaattGTAGCAACGCTATTGCTGGTGTATCTCATGATAAACCGGCTGAGGCaaaaaagaactacttccacgTCAGCTGTGAGAAAAACCATAATAATCCTGGCCAGTGCAAGAGATACAAGGGAAAGTGTCaaaaagatggaaaagaagGAAAACTGGTGTCTGTTTACTGCGTTCacaatGTTAAGTTTAACACCACCCAAACATGTGGAGGTCAGATTGAAGTCAGCTATGGACGTGGATGGAAAAAAGTGTGTCCCTTGAATTTATTCTCCAAGAAACATAAGGAGATGCTGTGTAAAGTACTTGGTTGTGGTTCTCTTAATGAAAGCAtaactaacaacaacaaacaggACCCTGTCCCTAACTTGGAAATATTGCTGGAGTGCAACAACGATCATCAGAACATCACATACTGTGTCAGCCAAAAACCTTGTAAAGATGCCCAACCAGCTGAGATCTACTGTGACGGGTATGTGCCCAAAAAGGAAACAGATCCTGTTCCACCACCGcccaacatactgtatatcatccTGGGAGTAGGatttcttctggttctggtcaTACTGATTGTTGTATTTGTACGCATCTGCATTGTCaagaaagccaaaaaaaaagccatgaaTTTCTCGTTGAGAAAGCTGTCAAGGAAAGAAGTGGAGTTTGAAAGTGGAGACTATGAAGATGTCAAAGACAATGAAATGGAGGACTTTAACCTTAGCAGATTCAAATCAGAGACTGAAGTCATCACGGAGAACGATGCACGGAGCACTTCCTCTTTTCCCTACGATGATATTGATGAGGCTCAACCCCTGACCTCTCAAGTCGCCACTGATGCTGACTCAAGAAACAACATCAATCAGGGTGACCCCGATGAAAGCACAGATGGGGTGACCTACGAGGTGGACGACCCTCAGGAGAATTACGATGACATCGAAGCCTGCCCTGAAATCACTCAAACCGAGGCTGAAGTCCACAACAGCCCCCAAACAACACCTGAAAGCGACGCAGAGGCACCTCAAGGATTAGTGCAGGGGGATGAGGACTACCTAGTGCCAGGCCAGGACGGGTGAGCCAAAACTAGGTTTAAAGGCTacagaaatacatttcaatCTGGCTACCATTTACAAAAACATactaaaaaagtcaaaattatAGTCAAACATCATTAGTGCAAAAAAGCTTTTTATGcagcagaaatatgcaaaagtggttgaaataaactttaaagcaggggtcttcaatgttttttaagccaaggacccctta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801991.1 True 4118 mRNA 0.45 19 33221464 33240428

Neighbor

gene id symbol gene type direction distance location
pim1 pim1,LOC102786254,LOC100704168,LOC102192917 coding downstream 148386 33068885 ~ 33073078 (-)
zgc:103759 LOC104952901,LOC101466673,LOC100706292,LOC102192048 coding downstream 200120 33016489 ~ 33021344 (-)
arhgap4b LOC103371877,LOC102798993,LOC102215860 coding downstream 206615 32972595 ~ 33014849 (-)
fam50a fam50a coding downstream 255700 32950105 ~ 32965764 (-)
si:ch211-207e14.4 NA coding downstream 271482 32934467 ~ 32949982 (-)
LOC120559885 NA coding upstream 30704 33271132 ~ 33294480 (-)
LOC120559567 klhdc8b coding upstream 83377 33323805 ~ 33470306 (-)
si:dkey-32e6.3 NA coding upstream 268260 33508688 ~ 33524809 (-)
usp19 NA coding upstream 285427 33525855 ~ 33554185 (-)
lamb2l LOC103362005 coding upstream 378195 33618623 ~ 33684274 (-)
LOC120558525 NA non-coding downstream 38146 33173866 ~ 33183318 (-)
G54735 NA non-coding downstream 532826 32688205 ~ 32688638 (-)
G54734 NA non-coding downstream 534850 32683360 ~ 32686614 (-)
G54733 NA non-coding downstream 538948 32682162 ~ 32682516 (-)
G54731 NA non-coding downstream 545999 32675265 ~ 32675465 (-)
LOC120558313 NA non-coding upstream 67703 33308131 ~ 33308924 (-)
G54922 NA non-coding upstream 78392 33318820 ~ 33319024 (-)
G54947 NA non-coding upstream 264385 33504813 ~ 33507223 (-)
G54949 NA non-coding upstream 267006 33507434 ~ 33508423 (-)
G55034 LOC103362008,LOC101472191,LOC102782874,LOC105937849,LOC100703845 non-coding upstream 509861 33750289 ~ 33757122 (-)
zgc:158296 NA other downstream 250301 32966635 ~ 32971163 (-)
G54834 NA other downstream 334174 32880193 ~ 32887290 (-)
G54756 LOC107088573,LOC106566972 other downstream 447978 32767357 ~ 32773486 (-)
LOC120559593 plxnb1,LOC103373813,LOC107100289 other downstream 555005 32590983 ~ 32666459 (-)
LOC120558955 LOC104919264,LOC102777709,LOC100695043,LOC102209489,LOC103373809,LOC103152775,LOC101470785,LOC106963186 other downstream 898189 32292942 ~ 32323275 (-)
lamb2 NA other upstream 315372 33555800 ~ 33614940 (-)
G55124 fam110a,LOC104960682 other upstream 783590 34024018 ~ 34127495 (-)
G55131 NA other upstream 847542 34087970 ~ 34093118 (-)
ntsr1 ntsr1,LOC103361890,LOC104959625 other upstream 996138 34236566 ~ 34291069 (-)
LOC120559165 NA other upstream 2029468 35269896 ~ 35277854 (-)

Expression


Co-expression Network