LOC120558571



Basic Information


Item Value
gene id LOC120558571
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 42197156 ~ 42235046 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XR_005639150.1
GCCAATCAGGAGCCTGGGAGGACTGGCCCTGTGACATGGAGAGAGCGTTCATTTGCTACGGTCCAGTGGTGTCTACTTCAAAGAAAGTGATGAAAGTGAAGTTTGAGAACAAGAAGAATCTGGATCTGAATGACCCTGCTGTGATGGAGGCCATGTTGAAGCAGctGAAACAGAAGCTGAGGGCCCAGGGGCTGGACCACAACATCAAACTGAGCTGGAGGAAGCAGGCCG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XR_005639150.1 True 231 lncRNA 0.52 3 42197156 42235046

Neighbor


gene id symbol gene type direction distance location
LOC120558562 NA coding downstream 75685 42117744 ~ 42121471 (-)
LOC120558363 NA coding downstream 294388 41897815 ~ 41902768 (-)
LOC120558622 NA coding downstream 635521 41548861 ~ 41561635 (-)
LOC120558618 NA coding downstream 674867 41516985 ~ 41522289 (-)
LOC120559078 NA coding downstream 700651 41488131 ~ 41496505 (-)
LOC120559081 NA coding upstream 30480 42265526 ~ 42267943 (-)
LOC120558557 NA coding upstream 49590 42284636 ~ 42309616 (-)
LOC120559083 NA coding upstream 102447 42337493 ~ 42344971 (-)
LOC120558564 NA coding upstream 282738 42517784 ~ 42521088 (-)
edem2 edem2 coding upstream 492349 42727395 ~ 42740582 (-)
G57543 NA non-coding downstream 14837 42181726 ~ 42182319 (-)
G57546 NA non-coding downstream 16649 42180183 ~ 42180507 (-)
G57544 NA non-coding downstream 21413 42170692 ~ 42175743 (-)
G57533 NA non-coding downstream 103379 42093445 ~ 42093777 (-)
G57271 NA non-coding downstream 423723 41621522 ~ 41773433 (-)
LOC120558572 NA non-coding upstream 151153 42386199 ~ 42388387 (-)
G57608 NA non-coding upstream 353029 42588075 ~ 42588539 (-)
G57614 NA non-coding upstream 388705 42623751 ~ 42690384 (-)
G57602 NA non-coding upstream 437742 42672788 ~ 42679995 (-)
G57619 NA non-coding upstream 449104 42684150 ~ 42684861 (-)
LOC120559080 NA other downstream 8701 42173990 ~ 42188455 (-)
LOC120558559 NA other downstream 62498 42128243 ~ 42134658 (-)
LOC120558546 NA other downstream 278413 41904140 ~ 41918743 (-)
LOC120559079 NA other downstream 465355 41716870 ~ 41731801 (-)
LOC120559188 arl8a,LOC100698319,LOC105027762,LOC103362481 other downstream 1059430 41126335 ~ 41137726 (-)
G57595 NA other upstream 301176 42536222 ~ 42651415 (-)
G57599 NA other upstream 392710 42627756 ~ 42650751 (-)
LOC120559085 LOC106531971 other upstream 397171 42632217 ~ 42660186 (-)
LOC120558550 LOC101476713,LOC102213613,LOC102303270,LOC100708795,LOC107104441,LOC107391492,LOC103384463 other upstream 445272 42680318 ~ 42698353 (-)
LOC120559088 NA other upstream 874390 43109436 ~ 43123426 (-)

Expression



Co-expression Network