G57961


Basic Information

Item Value
gene id G57961
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 15528 ~ 16917 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU77918
acacacacacccacacacacacacacacacacacacacatacacacacacacacacacacacacacacaccacacacacaaaacccaccagactccatgtaaataatcagtaatttaagcatgctaaacccaccaaactccatgtaaataaacagtcatttaagcattctaaaacacactacattaaaagtcgacagaaacaaaataaaactataaaaagccgtttttggtcttctctacacttttccaaccatcacaactctagtgttggtgaaataaacacataggttaccgatttacatgtgaaaatatgttggctctattcac
>TU77919
acacacacacccacacacacacacacacacacacacacatacacacacacacacacacacacacacacacacacacaccacacacacaaaacccaccagactccatgtaaataatcagtaatttaagcatgctaaacccaccaaactccatgtaaataaacagtcatttaagcattctaaaacacactacattaaaagtcgacagaaacaaaataaaactataaaaagccgtttttggtcttctctacacttttccaaccatcacaactctagtgttggtgaaataaacacataggttaccgatttacatgtgaaaatatgttggctctattcac
>TU77921
acacacacacccacacacacacacacacacacacacacatacacacacacacacacacacacacacacaaacacacacagacacacacacacacacacacacacacacacacacaaaacccaccagactccatgtaaataatcagtaatttaagcatgctaaacccaccaaactccatgtaaataaacagtcatttaagcattctaaaacacactacattaaaagtcgacagaaacaaaataaaactataaaaagccgtttttggtcttctctacacttttccaaccatcacaactctagtgttggtgaaataaacacataggttaccgatttacatgtgaaaatatgttggctctattcac
>TU77922
acacacatacatacacacacacacatacacacacacacacacacacacacacacacaccacacacacaaaacccaccagactccatgtaaataatcagtaatttaagcatgctaaacccaccaaactccatgtaaataaacagtcatttaagcattctaaaacacactacattaaaagtcgacagaaacaaaataaaactataaaaagccgtttttggtcttctctacacttttccaaccatcacaactctagtgttggtgaaataaacacataggttaccgatttacatgtgaaaatatgttggctctattcac
>TU77925
acacacacacccacacacacacacacacacacacacacatacacacacacacacacacacacacacaccacacacacaaaacccaccagactccatgtaaataatcagtaatttaagcatgctaaacccaccaaactccatgtaaataaacagtcatttaagcattctaaaacacactacattaaaagtcgacagaaacaaaataaaactataaaaagccgtttttggtcttctctacacttttccaaccatcacaactctagtgttggtgaaataaacacataggttaccgatttacatgtgaaaatatgttggctctattcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU77918 False 327 lncRNA 0.38 2 15528 16917
TU77919 False 335 lncRNA 0.38 2 15528 16917
TU77921 True 362 lncRNA 0.38 2 15528 16917
TU77922 False 315 lncRNA 0.36 3 16462 16917
TU77925 False 325 lncRNA 0.38 2 15528 16917

Neighbor

gene id symbol gene type direction distance location
LOC120560558 brd3,LOC101484219,LOC107386174,LOC101063386,LOC103397963 coding downstream 62715 79632 ~ 99504 (+)
ccdc157 ccdc157 coding downstream 166760 183677 ~ 187344 (+)
LOC120560800 NA coding downstream 196119 213036 ~ 216499 (+)
LOC120561159 rasal1 coding downstream 206224 223141 ~ 244194 (+)
syn1 syn1,LOC102209911 coding downstream 324060 340977 ~ 356353 (+)
LOC120560560 NA non-coding downstream 91649 108566 ~ 110061 (+)
G57994 NA non-coding downstream 104930 121847 ~ 126263 (+)
G57999 NA non-coding downstream 149101 166018 ~ 603180 (+)
G58011 NA non-coding downstream 192364 209281 ~ 210676 (+)
G58021 dtx1 non-coding downstream 228974 245891 ~ 252072 (+)
LOC120560799 NA other downstream 193825 210742 ~ 212383 (+)
lmx1bb lmx1b,LOC102213269,LOC100696266 other downstream 772488 789405 ~ 837861 (+)
dock5 dock5 other downstream 2256761 2273678 ~ 2312665 (+)
lman2lb NA other downstream 2861457 2878374 ~ 2883861 (+)
LOC120560521 tjp2 other downstream 3418248 3435165 ~ 3522756 (+)

Expression


Co-expression Network