LOC120560045


Basic Information

Item Value
gene id LOC120560045
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 17589 ~ 24949 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU77947
agaagaagtAAGCTAGAGGAAACATGGTGAATCTCCGAGTTGGATTATTGATTTTTCCCACGCCCACGACAGCATTGGCTttttcacTCGTCAATTTCACCTGCCTGAAGTCAATAAAAGGAGCGAGGCGCTCATCGTCCTGGCTCGTGAATTCGAGTTTGGCTTGCTGTTGAACTGTGTCAACGTACTGGAAGTACATAACACATAGGGAGAACAGTATA
>TU77948
agaagaagtAAGCTAGAGGAAACATGGTGAATCTCCGAGTTGGATTATTGATTTTTCCCACGCCCACGACAGCATTGGCTttttcacTCGTCAATTTCACCTGCCTGAAGTCAATAAAAGGAGCGAGGCGCTCATCGTCCTGGCTCGTGAATTCGAGTTTGGCTTGCTGTTGAACTGTGTCAACGTACTGGAAGTACATAACACATAGGGAGAACAGTATA
>XM_039802155.1
ACTATCACCGCAGCCAGAGCCCACAATCCCACGCCTTGAGCTCTGTGGAGCCGTCCTGGCTGTTGAGATGGCGGAGCTGATCTTAGATGAACTGGACCACAAGCCAGACGCTGTTAAATTCTATTGCGACAGCAAGGTGGTCCTCGGATACATCTCTAATGACTCAAAGCGCTTCTTTGTGTATGTACACAATCGTGTGCATCGCATACGCCAGACAACATCCCCTGAGCAGTGGCATTACGTCCCTTCGGAACAGAACCCAGCCGACTTAGCCACCAGATCTGTAGCTGCATCACAGCTCATGGACACAATGTGGTTCAAGGGACCTGACTTCCTCTATAAGCCTCCAACGCCAGAAGTGCGTGAGCACTTTGAACTGATAAACCCTGAAATGGATGTGGAAATCAAACCACAAGTGACTGCTCTAGCTACCCATACTGAAGCCAAGCGACTTACCGCTGAACGATATCAGTGTTTTTCCACATGGAAGTCCTTGCTGAGAGCTGTTTCCTTTTTGATACATCAGGCGCGTTCTCACAAGTCAGGCTCCACCACAGACACATCACAGCACACGTGCAAAGGGTGGCATCAGTGTAGTAGGGCCCGCACTACTGAAGAACTCGCAGTAGCTAAGAGACTCATACTGGAGACTGTTCAAAGAGAGACGTATCCAGACGAATATGCGGCTCTACAGAGTAAGAGAGAAGTCTCTAAGTCAAGCCCAATCTTGACCCTTGACCCCTACATCAGTGATGGCCTGCTGAGGGTCGGAGGGCGTCTCAGACATGCTTCCCTTGAATCAGAGACGAAAAACCCAATCATCCTGCCAAAGAATAGCCATGTCACCAAGCTGCTTGTGCAATACTATCACACAGAAGTGAAACACCAGGGGCGGCAGTTCACAGAGGGGGCCATCAGAGCGGCTGGGCTGTGGATTGTTGCTGGAAAAAGGCTGGTCAGTTCTATCCTTCATCACTGTGTGATATGCCGTAAGCTCAGAGGGAAACTTGCAGTGCAGAAGATGGCAGACCTCCCTCCAGAGCGGCTTGACACGTCTCCACCCTTCTCTTACGTGGGGCTGGATGTATTTGGACCATGGACAGTGGTGACCCGACGGACTCGAGGAGGCGCAGCGCAGAGCAAAAGGTGGGCCATTCTGTTCACATGTATGGGTACCAGAGGAGTACACATCGAAGTTATAGAGTCCCTGGATGCCACCAGCTGTATCAATGCTTTGCGGAGATTCTTTGCAGTCAGAGGCCCAGCAAAGCAACTCAGGTCAGACAGGGGGACCAACTTCATTGCTGCCAGTGCAGAACTGGGTATGGATCCTCCTAATGGAAAGCAGACAAGCATCCTGAACTATCTCCATAGCAACGGCTGCACATGGGAGTTTAATCCCCCACACGCATCCCACATGGGAGGAGTGTGGGAGAGGATGATTGGGGTGACACGCAGAATATTGGACTCTATGCTTTTGCAAAACAAACCTACTTACCTGACACATGAGGTTTTGTGTACTCTGATGGCAGAGATAACAGCAATAATCAACACAAGGCCGCTGGTCCCCATCTCGTCAGATCCCTCCTCTCCAGTTCTGCTGTCCCCTGCCATGCTCCTGACACAAAAGCCAGGCCTACACGCTCCACCAGGTGACTTCACCGGAAAAGATCTCCTGAAAGGCCAGTGGAGACAAGTGCAAGCGCTTGCGAACGAGTTCTGGGGTCGTTGGAGAAACGAATACCTGAGCACTCTCCATCCAAGACGCAAGTGGCACAGGACACACCGCAACCTGCAACCTGGAGACGTTGTGCTGTTAAAGCAAAGTCCAGCACCAAGGAATGAGTGGCCAATGGCTTTGGTCACGTCAACCTTCCCGAGCAGTGATGGAAAGGTCCGCAAAATTGAAGTGAAGACATCATCCCAGGGCACCTCCCGGACTTACCTGCGCCCCATCTCCGACATCGTCCTTCTCCTAGAATGCGACTAAAAAGAAATgaactgaaaaaagaaaaagaaaaaaaagggttgaATTTAGTGGCATTAGTTATGCCAGACGGGGAGTGTTCTGTCCCCAGATATATTGAAAACttggtttatttaaaaatgtttgataTAAATTAATTTGAGGTGTTAAACTTGGTGCTATTGTAAATATATTCAGGAATAGTTTGCAGGgaacctttattttgaaattcatggCACGTAACGTGTTTACATTTCCGTAGCTAGTAAtagtagtagaagaagaagtAAGCTAGAGGAAACATGGTGAATCTCCGAGTTGGATTATTGATTTTTCCCACGCCCACGACAGCATTGGCTttttcacTCGTCAATTTCACCTGCCTGAAGTCAATAAAAGGAGCGAGGCGCTCATCGTCCTGGCTCGTGAATTCGAGTTTGGCTTGCTGTTGAACTGTGTCAACGTACTGGAAGTACATAACACATAGGGAGAACAGTATAGCGATACAGCATAGTCCCAAACGGGGCTTGTTTTGAGCGATGTTAAGCGATTTCTCGACGATTTCCCATTCAAGTCTATGGGACAATTTTGCGCGGGTTTTTGCCGATTTCGTGAAAACTGTgcggcaa

Function

GO:

id name namespace
GO:0004690 cyclic nucleotide-dependent protein kinase activity molecular_function
GO:0004692 cGMP-dependent protein kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU77947 False 221 lncRNA 0.45 2 17718 24949
TU77948 False 221 lncRNA 0.45 2 24399 24949
XM_039802155.1 True 2595 mRNA 0.49 2 17589 20513

Neighbor

gene id symbol gene type direction distance location
LOC120560559 NA coding upstream 77810 102759 ~ 104882 (-)
LOC120559980 LOC103375490,LOC101157704,LOC101486660,LOC107393662 coding upstream 94658 119607 ~ 121761 (-)
LOC120560346 tbc1d10a,LOC102790521 coding upstream 135703 160652 ~ 174761 (-)
sf3a1 sf3a1 coding upstream 152925 177874 ~ 183724 (-)
slc7a4 slc7a4 coding upstream 171359 196308 ~ 209722 (-)
G58100 NA non-coding upstream 352841 377790 ~ 378658 (-)
LOC120561213 NA non-coding upstream 564210 589159 ~ 592245 (-)
G58217 NA non-coding upstream 1038744 1063693 ~ 1064411 (-)
G58223 NA non-coding upstream 1044442 1069391 ~ 1069627 (-)
G58225 NA non-coding upstream 1047090 1072039 ~ 1072333 (-)
rimbp2 rimbp2,LOC107081823,LOC108247306,LOC103353655 other upstream 1507104 1532053 ~ 1658048 (-)
ankrd39 LOC103353637,LOC100700369 other upstream 2112847 2137796 ~ 2139643 (-)
LOC120560995 NA other upstream 2525097 2550046 ~ 2551366 (-)
ggt1a ggt1,LOC102775580,LOC108234964 other upstream 2552926 2577875 ~ 2592746 (-)
si:ch211-107p11.3 LOC103353652,LOC102075650,LOC108234931,LOC104950460 other upstream 2660942 2685891 ~ 2689087 (-)

Expression


Co-expression Network