G57994


Basic Information

Item Value
gene id G57994
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 121847 ~ 126263 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU77970
CTCAGCCCTCCCCCTCCGCCTCTCTCACCTCTTCTGGTGGGGCCCATCCCTCTGCCCCGAGCAGCACCACTACGTTCCCCGCGCAGGCAGCTCAAACCTAATGTTTTCACACCATGCAAAATCAATAACCATCTGTTAGCAATTTTCAGGAGAAGCCAAAATAGCATACAATAACCGATTCAATTCAATAACTTatcaaatattaataatttgTCGAGACACGATCCCCATCTGGCGTCTGGAAATAAGTTCATCTGATAGGCCTTTTACAAGGTAGGCTACGTCAATCAATCAAGCAGTTAATCAGTCACTTCATTTTATATAATAATCTTACAATTTAGCTTGGTTTTTGTACTGAAGAGCAATGACCTAATTGGCGATCGTGAACAAGTTATAGGCTAATAATGATAACCAGCACACAGTGGATTGGATCAGTTTTTGTCCGTTACTAAAATAAATGTGATCATGTAAACAAAGCGGACAGATGCAGACCTGTTGGTCAGGTGGCACCAAACTGCCGCCCTCTACTTTTCTCTTGTGATTTGATCTTTTAATCGCCACGACGACTTATACTTTTCAGCGTTGCATTAGTTTACCTGCGATTTCGTTAGAAACGGTGGATTCAGCTCAGGTGCGGAACACGTCTGGACATTTCAACTCCTCTCGTTTTACATCACAATCACTATATTAAACGGCTGTTAAAAATGCACGACTGTCAGATGCGTCACATTTCGTCTCTTATTTTGTCGCCAGCtgacaataaaaaagaaagtttaGGCTACTGTCAAACTGAAATGTGTTGCAGCCAAGCGTGCCTCATCAGAAATATTACCAATTAGATGAGTTGCCTTGAAATGACAACGTAATTAGATCGACAGTGAATTGCAAACTGTTTGAAGATTAGATTAAACGTCAGCGGGCAGCTCAGGCGATGTGTGAATTGAATTCTCAAGTCTGGGGATTTATTTCCATGATAAAAGGACAAGCAAACGCACCGGtttgaaaccaaaacaaaaggAAACCTCACATTGACACCATCATAGTGCTAACAATGTCTATTTCTACACCCTTTTCATTGAGCCTGTTGGTTTAATACATGTTCATTTAACTGCCGATTGCATTACTTACCGATAGGAGTTAATGCAGTGCAATTTAAAAGGCAAGAAATTAGAGAATTATATTATCTATATATAGCCTATTCAAACTAGGATTGTCCAACAATAAAACACCCTGCTACAAAAAACTTAGGAAAGTTGAGAAAAGGATTGTTAACACCCAACCTAAAGAAATAATTTTGCATTATGGAAATGTAACTTTAGGCCTACTGAGCGCAAACATCTGCCAAACTATTTGGCAAActattcacaaaatattttatgtatgtatatgtatatgtatatgtatgccTATTTTTCAACCTGCGATGAGACTCTGCCAGCTCAAGTGAATTGCCTTCAGTGAAACAAAGAGTGGACAAGTCTGAGCAGCGCTGGACATTATTTATAGTTAGGATACTCTGCCTAAAAACAGGCCACCTAGTGGTGATAACATGGAACTACAACAGGAATCCTCAGTAGATTATTACACTGTAAATGCACTGGCTTTGAGAAATGTCTTTGGTGAAAGGAAGGACTCTCTGGATCACAGCTTATGAGCCTGACTGGTTATTGTGCTGTACATAGAGCCAGCTGAGAGGTGTCTAACATGGCAGAGACTTATTCTTCTTTTAACAAGGAGgagatgtttgtgtgttaaaaaaaatgaaagaaagttGTGATTatgataaaagaaaaatgaaccGTGCCTATTCTACTTGTGATTTATCCCTGatcttagacacacacacacacacacacacacacacagaccaggtGGGTCCCACCTCCACCTCATTCCCCAGGGAGAGGATTGGTCGCCTGCTGCTTGCAGGCCCGGTATCCCTTAGACAAATAAATTagcaaatttaaaaaataaaggcaAGCAGATAAGAAACAGATGGTCAGATTAGACCATCGTCTTGGATATCTTCAGAAGACCTCCTCACTTGTTAATCAGAGCCTTTATAGGTGCCAAGATAAAGTCCTGCTGCTGATATTGAGGTCAGTTTTCAGAGGGGTGGGAAGATGATCACGAGCTGGAAGGGAGGATATACtttcaaaagaaaatacaagtaaaatatataaatgccGGTTTTGACCAGAAGTTACGGCATGGTCATATTTCCTTTTCATCTTATATCACCATTGCTACCATGCCACCTATAGCTGCATTGTGTCACAGGGTTTTCTCTCTCATGCCTGGACCACACATGTGTCCCTGCCACAGCTGTGACTCCTTTTGATCCGCTGCTGTAATGACCCTGCTGCTGTGATGTGACTGCTTCTGTCTCACTCTGAAcattagcttcatttttggtcgagGATATCGTGGATGCAGCTATTCAATGGAAAGGTCCTGCTATCGTATGATTTGTAGCAGCTGATATTCTTCTGAAAAGAGCGAGTTGCGTGATATCCATCTTTACAGAGTTCACTGGAGTGAATTGACAGGCGACTTGGGGGACATTTGCAATGGCCGCACGTCAGCTCCAGTCTGGTCAGAGGGGGAGATAAGTGATTGAAGGTGTAATCTGTGACCTGGGGTTTGTTTGAAGTGTAAAAAGTTGATGGCAGCACACATATCCCCCTCTCCCTTCCTTGATTTGTGGCCAATACAGCAGACCCCAGGCCCCACAAATCATGCTGAGGCACCCGGGGaccagggccacagggggtctAGAGTCACACTGTGGTGTTATTTCAGAGCCAGTGTTGGTCCCTAAGTGCACACAGTCcctgctaaaaaaacaaacaaacactttatgtggaataaaaataataattcctatCGGACCCTGatttgtgtttccatccaatCTTATAACTAACTGTGAGCCACAGCCGCGTACCTTTCGCGTCGGCCTGCTAAGTGCCGACTCTGCTACGTGAGACGACATCGCACTCCAGTGCAGTGAAGCCAGTGCCACACCCTCAGATGTGCGAGGGCACAGCTCCTGCTGAGGGGTTTGCTAATTGCCAGAGCATCTTGTCAAACTGTAGGTTTTCTCAGGACCTCTGGCTGTTGTGTGTCCGCTACTCCTGTGTGACAATTTGCTTCTGCATGTGTGCAGTTTCAGTgcaataagaaattaaacatccCAAAAAAGCACAAAGGTGCTCATATTCTCATAGTGTGACATGGGAAGTTCTGTTAATAACTTCCAGAGGGCattgtgctgtgctgtgtgccTCATTAAATCCTTGAGCTTGAGGTCAGCCATATCACAGCTATCTTTTCTCCACATCTGCCATACTTGACCTCAGCATTGAACTGAATAGAGAATTCCACCCAATCATTGGAAATGTTTGCGCTGATAAGGCTGCTCTATTGTTTCATTTTTGTCGCTCTAAGCAATTTTCTCCTAATGAGCAATGCACCTGTAGTTAGagtgctttttaaaatgtcatcatGTATCCCAGATTAGGTTGTAACAACGGATGTTAATTCTTATTTACTGTACTGTCTGCTGTACTATTGTTGGGTACATTGTTTAGGGACTGTTGAAAACTTATTGGAGTTGGCAGACATTTCACCTATGCCTTGAATAAGAggaaaacatactatactgtatttctatttctataaTACAACAGTACACAATTGGAACAACAATTTTCAGTGTTAATAACTAACGTAAGAAAACCACTAATAAAACCATAATATGTTTCAGGACCCAACATTTTCACATATATACCGACTACTAAAATTATGACAGGATTGTTGTCCACTGCATATAACCAAATGCACCTTTTTGACCTGTGGCACACAGAAATGCTATTTTTATGTGAATATTTTGAAGAATTTTGCAATAAATCTTagaagattaaaagaaaatgtaaaatgtatgaCCCTCTGCTGCTCTCCCAAAAAATGTGAATATCCCTCAACAAAAAAAGGAACCCTCTCTGTTTTCTGCCCAGCCTTTTTGGACAGTCACAAGAAACTTTTCCCTTAAAGAGGAACTCCAccgattttacacatcaaatcTGTTCATAGGTGTTGAGGAGTGCTactgcatatttaaaaaaaacttgtactGTATGGCTTTTGctgcctcaagtgatgtcagttagaaagaagtgagctcaccagacctctgtagccaactcctcatctctgcttgaggctgGTGGTTCAAGACTAAATTAGCCTCAACTAGCAACTAATCCACCCAAGAATCTCAGAGCTCTATGAAAAATCACTGAATTGTCAGCTGccgagttgcattatgggtaatGAAGgcgccaggttttgacaagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU77970 True 4359 lncRNA 0.41 2 121847 126263

Neighbor

gene id symbol gene type direction distance location
LOC120560558 brd3,LOC101484219,LOC107386174,LOC101063386,LOC103397963 coding upstream 22343 79632 ~ 99504 (+)
ccdc157 ccdc157 coding downstream 57414 183677 ~ 187344 (+)
LOC120560800 NA coding downstream 86773 213036 ~ 216499 (+)
LOC120561159 rasal1 coding downstream 96878 223141 ~ 244194 (+)
syn1 syn1,LOC102209911 coding downstream 214714 340977 ~ 356353 (+)
unm_hu7912 LOC102295462,LOC101483439,LOC103375604,LOC100694328 coding downstream 241118 367381 ~ 376915 (+)
LOC120560560 NA non-coding upstream 11786 108566 ~ 110061 (+)
G57961 NA non-coding upstream 104930 15528 ~ 16917 (+)
G57999 NA non-coding downstream 39755 166018 ~ 603180 (+)
G58011 NA non-coding downstream 83018 209281 ~ 210676 (+)
G58021 dtx1 non-coding downstream 119628 245891 ~ 252072 (+)
G58024 dtx1,LOC106585516,LOC106579922 non-coding downstream 131305 257568 ~ 259697 (+)
G58057 NA non-coding downstream 415627 541890 ~ 572532 (+)
LOC120560799 NA other downstream 84479 210742 ~ 212383 (+)
lmx1bb lmx1b,LOC102213269,LOC100696266 other downstream 663142 789405 ~ 837861 (+)
dock5 dock5 other downstream 2147415 2273678 ~ 2312665 (+)
lman2lb NA other downstream 2752111 2878374 ~ 2883861 (+)
LOC120560521 tjp2 other downstream 3308902 3435165 ~ 3522756 (+)

Expression


Co-expression Network