G57999


Basic Information

Item Value
gene id G57999
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 166018 ~ 603180 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU77979
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcagtctcaCCAGGCCAGGGCTGTAGTAGCCAGGAAGGTACTTCTCACAAATTTGGACCAGCCCCCAGAAGGCATCCTGTGGAAAAACATACAGATGATGTCAGGAAAATGAGAGGAACTGTTCATTTACTGCATCTTTACATGCGAGGCAGGTTAATACTGGACATTTTTTACTTAGACTATAGAAGCTAAAATCTAGCCATTTATCTTTGGATGTGCAGCATAACATAAAAAGGTGAAAGACAAAATAATTAGACTTTATAGACAAGAACTGTGAAGTTACTATtaaaaaggtcctatgacattttggatgcttttatataggcctcagtggtcccctaatactggatctgaagtctctttcccaaaattcagccttggtgcagaattacagccactagagccagtcccacaatgagctttccttaggatgtgccatttctgtgtctgtagctatagaccctttgcacgtgacgtcacactctactcccgcgaattatgaacgccatgacggacggcggaagagCTATTCTGTAGACGGACGGCAAGTCAAACGAGAACGTGTTCGCtgcttatatactgtgtatggttcgctgttcttgttctcacgagtcacatacacaatctgcagagtaatcctcaccaacacaagcatgtgtatgtattgcctttctgttttaaatgactgaataataataataataataataataataataataataataataataataataataataataataatacttcctcacccagctaactgccgtgctaaccagctgttcctgctaacaggtcccacataactatcatcggttattcactgacctacatatcccaaaaagtaagccgttcccttgatcatttaacttaacacgcatacaaaaaatattggttaaattaaagatgacatggcacggaaactagcttcaaaaaggccaaacaactgaattaaataCGGGTCTGCGGAGCTCCTACCCCGGTTAGCCGACCAGCTAGCTGTCGAAATATCCACCGATCAACAGCGAATAGAATCACAGATAAGACGATGGctagatgttacattatgtgtggttaCTGATCATAGACACTCCgtgatttactgcatggattaaCGTGTGATGAATTATTTCCCAGAGCTGGGATGCGTTCAGGCATCCATTAGAGAGTTGCATCGGCTCAGCCAGTGAACAACGGTAGCCTAcgtgcctgtagctagcttgccctgctagctgatagccgttagctgctagctgccgtcctgtgagtgtattcagacaggcttctgtgataatcatcccaataacaatccacggtggtgtggctatgtcctccagaggacaggttgTGTCACgtattgaagtgtattcccccctaaaaaaaacaaacagtagtgcggtagtagctgctagttgtagcaagaaaaggtaaacagtagtgtgccgatcggagcgtagtgtgtgaagagtgaagagcagatttgtttacaagggaagaagcttggagtaacgtaactatggagaatatagcagatatacaacacagggaagagccttttgagttatatggtcgtccttatttattcgaatccgagtatacagacgaagaactagcctcacaagagttggaaagaacgagacagacagaggggcaacaggcagatgaacttgctgctccaagcgcaaactaaagctagccttcagtaactggaagacatagccacaccaccaccgctccatggattgttattgggatgattatcacagaagcctggctgactacactcaccggacggcagctaacggctaacggctagcggggcaagctagctaccggcaggatcgagacagggaccagggtaggtgaatttaaacaatgtctgaagaagccatgaagaagaagatagtataattattattattacattttatttagtgttatttatttgaaactaatgaaactttccgcTCGTCGAATACACTatttagcttgtgcttccgttgattctgccgtccgtcatggcgtagtcacgtggtcgtggtcacgtgtttgcaaagggtctattgaggaggagagagggcggggcaaggtggagggtgggggtgtggctttgaccaactgccactttgctcgtttgaaagccatgatgtctctctcccatgggtgggccaaattctctgggcgggcaaagcagagaaaggggaggtaaccttgctccttatgacgtcataaagggaagattccagaacggtccatctgagctttcattttctcaaaggcagagcaggatacccagggctcggtttacaccta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU77979 True 2416 lncRNA 0.44 2 166018 603180

Neighbor

gene id symbol gene type direction distance location
LOC120560558 brd3,LOC101484219,LOC107386174,LOC101063386,LOC103397963 coding upstream 66514 79632 ~ 99504 (+)
mvb12bb LOC104950954 coding downstream 129517 732697 ~ 773213 (+)
zbtb34 zbtb34,LOC100694860,LOC102780544,LOC102300203 coding downstream 266851 870031 ~ 877817 (+)
adamts13 adamts13 coding downstream 426077 1029257 ~ 1052283 (+)
LOC120560446 LOC104936599 coding downstream 502784 1105964 ~ 1127084 (+)
si:dkeyp-14d3.1 tmem132c coding downstream 554290 1157470 ~ 1329623 (+)
G57994 NA non-coding upstream 39755 121847 ~ 126263 (+)
LOC120560560 NA non-coding upstream 55957 108566 ~ 110061 (+)
G57961 NA non-coding upstream 149101 15528 ~ 16917 (+)
G58151 NA non-coding downstream 276074 879254 ~ 882251 (+)
G58156 NA non-coding downstream 288917 892097 ~ 892439 (+)
G58157 NA non-coding downstream 295713 898893 ~ 899506 (+)
G58209 crat,LOC107393635,LOC102215149,LOC101477431 non-coding downstream 449835 1053015 ~ 1053413 (+)
G58215 ier5l,LOC103375736 non-coding downstream 457849 1061029 ~ 1062510 (+)
lmx1bb lmx1b,LOC102213269,LOC100696266 other downstream 186225 789405 ~ 837861 (+)
dock5 dock5 other downstream 1670498 2273678 ~ 2312665 (+)
lman2lb NA other downstream 2275194 2878374 ~ 2883861 (+)
LOC120560521 tjp2 other downstream 2831985 3435165 ~ 3522756 (+)
G59086 NA other downstream 3514099 4117279 ~ 4117631 (+)

Expression


Co-expression Network