G58011


Basic Information

Item Value
gene id G58011
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 209281 ~ 210676 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU77996
ACAGGACGCATCCGTTCTTATTACGTAACGCTTTATCCGCCTCTAGAAATAAAACCCCAGCCATCATAAACTACACACCATTCGTTTATTCGTTTTTCAGTAACCACGCATTTCGTACTGTGAAAGGAATATAGCCGACGACTGGAGTTGGCGTCGTTTTAAGGCcaaattaataatttaaaacaaaatggaaactGACGCAAAAAAAAGAGGATCGTTTAGTGCATTAGACTGCCTCTTTCCTGAATGTTACGTTACTGGACATACAGAGCCACAAAAAGAGAAACCTCAGTAATAACGTAAGAAATACAAGCATCGCTTTACCGTTGTTGTTCAGGGTCTGTTATGTGAGCTGCAGGTTCGGTGCTGTGAGAAGTTACCGGGGCGCCTCGTCTGGTGATGGAGCCGGATGGAGCAGAAGGTGCGCTGAGGAATAACCACCACGCACTGCCCGGACTGCTCTTAAAGGCACAGTCACCTTTATCCCGTGGAAAGGGaggcgggtatggctgcagcctggagcgtcccATGTCATGCGGTCCCGTCTCATGCGGTCCCGTCTCATGCcgaggctttccaacggtaagTTCAGAGGGTCAAAAATACAAAACCGCGATTTATTTACCAGATTTCCAGATGGAGTCACCATAGTCACGGGTACACATCAGTGTCTTTAAAAGAAATAGCACACCCCCGGTGACACGATGCACGGTGTGTTGTACCGACCATCATTGCCCCCTTTGCCCCACTTCCATATACAAGCCCCGGTGTAGGGCAAAGGTTTTGCAGCACATGGAGGTGCATGTAAAGAATGCCATTCAACATGAAGATTTCTTCATAACAAAATGCCACCAGGCCTGCAGGAGTGGAAGCAGTGGTCACTTCCACTGCCCTTTCTGCCTCAagaccacaataaaaaggcaggcTATACAGAGGCATTTGCCGATCTGTAGGCCACCTCTCCATGATGCCCAGTTGGATGCTgatgcagactgcagagagatGGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU77996 True 1007 lncRNA 0.48 3 209281 210676

Neighbor

gene id symbol gene type direction distance location
ccdc157 ccdc157 coding upstream 21937 183677 ~ 187344 (+)
LOC120560558 brd3,LOC101484219,LOC107386174,LOC101063386,LOC103397963 coding upstream 109777 79632 ~ 99504 (+)
LOC120560800 NA coding downstream 2360 213036 ~ 216499 (+)
LOC120561159 rasal1 coding downstream 12465 223141 ~ 244194 (+)
syn1 syn1,LOC102209911 coding downstream 130301 340977 ~ 356353 (+)
unm_hu7912 LOC102295462,LOC101483439,LOC103375604,LOC100694328 coding downstream 156705 367381 ~ 376915 (+)
gapvd1 gapvd1,LOC102777314 coding downstream 170496 381172 ~ 432629 (+)
G57994 NA non-coding upstream 83018 121847 ~ 126263 (+)
LOC120560560 NA non-coding upstream 99220 108566 ~ 110061 (+)
G57961 NA non-coding upstream 192364 15528 ~ 16917 (+)
G58021 dtx1 non-coding downstream 35215 245891 ~ 252072 (+)
G58024 dtx1,LOC106585516,LOC106579922 non-coding downstream 46892 257568 ~ 259697 (+)
G58057 NA non-coding downstream 331214 541890 ~ 572532 (+)
G58151 NA non-coding downstream 668578 879254 ~ 882251 (+)
G58156 NA non-coding downstream 681421 892097 ~ 892439 (+)
LOC120560799 NA other downstream 66 210742 ~ 212383 (+)
lmx1bb lmx1b,LOC102213269,LOC100696266 other downstream 578729 789405 ~ 837861 (+)
dock5 dock5 other downstream 2063002 2273678 ~ 2312665 (+)
lman2lb NA other downstream 2667698 2878374 ~ 2883861 (+)
LOC120560521 tjp2 other downstream 3224489 3435165 ~ 3522756 (+)

Expression


Co-expression Network