G58156


Basic Information

Item Value
gene id G58156
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 892097 ~ 892439 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU78184
agcaatctgagctctgaggcggagagccccgtggccggccgcagcgtctcttcccccgggcaaaaacacagcttcgcctcgctgctgcgccggtccccgctgatccagatcggaccggccaaagacagagtggtgatcgggaggatcttacacgtagtccaggacgacctgtatgtcgatatcggcgggaagttccactaagtttgccggcggcaggcggacggagagaagctacagcggggcaacagagaccgtctgcggctgcaggatctggagctcagtgccccttaaaattatatttaacgcataaatacatacagaaataaatagtggaggagtgagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU78184 True 343 lncRNA 0.57 1 892097 892439

Neighbor

gene id symbol gene type direction distance location
zbtb34 zbtb34,LOC100694860,LOC102780544,LOC102300203 coding upstream 14280 870031 ~ 877817 (+)
mvb12bb LOC104950954 coding upstream 118884 732697 ~ 773213 (+)
pbx3b pbx3 coding upstream 298292 532813 ~ 593805 (+)
gapvd1 gapvd1,LOC102777314 coding upstream 459468 381172 ~ 432629 (+)
unm_hu7912 LOC102295462,LOC101483439,LOC103375604,LOC100694328 coding upstream 515182 367381 ~ 376915 (+)
adamts13 adamts13 coding downstream 136818 1029257 ~ 1052283 (+)
LOC120560446 LOC104936599 coding downstream 213525 1105964 ~ 1127084 (+)
si:dkeyp-14d3.1 tmem132c coding downstream 265031 1157470 ~ 1329623 (+)
glt1d1 glt1d1 coding downstream 479345 1371784 ~ 1396195 (+)
fzd10 fzd10 coding downstream 584649 1477088 ~ 1480626 (+)
G58151 NA non-coding upstream 9846 879254 ~ 882251 (+)
G57999 NA non-coding upstream 288917 166018 ~ 603180 (+)
G58057 NA non-coding upstream 319565 541890 ~ 572532 (+)
G58024 dtx1,LOC106585516,LOC106579922 non-coding upstream 632400 257568 ~ 259697 (+)
G58021 dtx1 non-coding upstream 640025 245891 ~ 252072 (+)
G58157 NA non-coding downstream 6454 898893 ~ 899506 (+)
G58209 crat,LOC107393635,LOC102215149,LOC101477431 non-coding downstream 160576 1053015 ~ 1053413 (+)
G58215 ier5l,LOC103375736 non-coding downstream 168590 1061029 ~ 1062510 (+)
G58230 asb6 non-coding downstream 187170 1079609 ~ 1083228 (+)
G58237 NA non-coding downstream 220315 1112754 ~ 1113040 (+)
lmx1bb lmx1b,LOC102213269,LOC100696266 other upstream 54236 789405 ~ 837861 (+)
LOC120560799 NA other upstream 679714 210742 ~ 212383 (+)
dock5 dock5 other downstream 1381239 2273678 ~ 2312665 (+)
lman2lb NA other downstream 1985935 2878374 ~ 2883861 (+)
LOC120560521 tjp2 other downstream 2542726 3435165 ~ 3522756 (+)
G59086 NA other downstream 3224840 4117279 ~ 4117631 (+)
G59172 sub1 other downstream 3531702 4424141 ~ 4429981 (+)

Expression


Co-expression Network