G58215 (ier5l,LOC103375736)


Basic Information

Item Value
gene id G58215
gene name ier5l,LOC103375736
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 1061029 ~ 1062510 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU78267
TCATGGTTTATTTGAAAGCAATAAAATAATACgatacaaagaaaaacaatcatACAAATCAAAATGCTTCGATTGCTCTGGTCCAACCGCTGCCTGTTAACAGTGTatgttttaaacaaattgtcTGAGCGGCGAATATTTGCTCAAGGTCCGTCTGCTGCCAACTCACAAACTCAGATAGTCCACCTGAACCCAACACTGAGATCAGGTTGGAGATGTTTGTGCTGTCCAACTGGTCCGAGTCTGAATGTAAATCATCATCAGTCCTCATCCTTTTAAACGGCACTGGTCCAAAGTCTGGCAAGTAAAACTCTGGATCAACTATATGGTAACTTGTGTCCATCTTTCGCTTTTTAGTGTAGCACTGCGCGCCCTGCGGCTGTTTTGACTGCGCGCAACAGTCTGAGTGAAAGTATCCATTCGTGACAGTAGTCACCACATGCGTGTCCAAGTCCAGGACAGTCTTTTGGTTGGCTTGTGCGTTTAGGATAGGTAACTCCCAGGATGGTTTGTCTGCACAACTCCAACAGGCTTCCGAAAGCATGAGGTCTGAGTCACTTGGTGAAAGCATTGCGCAGGCAGATGCGTCTTGGTGCGGCACCTCTGCAGGCTGGCCGTTGGGCTGGTGCGCTCCGCAGTGCCAAGTGTCCGACTCAACCCCAGTAAAGTTGCAGTAGAAGTCATCGCCCAACTCCGTTAAGCTCCCAGTCAATTCGAAATAGTCTTGCCTTTCACGGACTGCAGATACATCCTCATAGTGATGCGTCCTCTGCGTCTGAAACAAGTTTTTGCTCATATAAAACTGCCTAGCGTTTCTCAGTACGTACGTTACCAGTAAGTTCTTGTGGAGCTTGATGCCTCCTCTCTGCGTCCTGGAGCTTTGGATTTTCCTCAAAGAGATGGAGATCAGATTCTGTGCGTCAAATACACACTCCATCCTCACCCGGGCCTCCCGTTCTTTCCTCTCAGTCTCTCAAAACGTTTGTTTCTTCACTGAAGAAATATGTACGTCTTTAGTTGAGATTCCTACTGGATTCGTGTAGACTGT
>TU78268
TCATGGTTTATTTGAAAGCAATAAAATAATACgatacaaagaaaaacaatcatACAAATCAAAATGCTTCGATTGCTCTGGTCCAACCGCTGCCTGTTAACAGTGTatgttttaaacaaattgtcTGAGCGGCGAATATTTGCTCAAGGTCCGTCTGCTGCCAACTCACAAACTCAGATAGTCCACCTGAACCCAACACTGAGATCAGGTTGGAGATGTTTGTGCTGTCCAACTGGTCCGAGTCTGAATGTAAATCATCATCAGTCCTCATCCTTTTAAACGGCACTGGTCCAAAGTCTGGCAAGTAAAACTCTGGATCAACTATATGGTAACTTGTGTCCATCTTTCGCTTTTTAGTGTAGCACTGCGCGCCCTGCGGCTGTTTTGACTGCGCGCAACAGTCTGAGTGAAAGTATCCATTCGTGACAGTAGTCACCACATGCGTGTCCAAGTCCAGGACAGTCTTTTGGTTGGCTTGTGCGTTTAGGATAGGTAACTCCCAGGATGGTTTGTCTGCACAACTCCAACAGGCTTCCGAAAGCATGAGGTCTGAGTCACTTGGTGAAAGCATTGCGCAGGCAGATGCGTCTTGGTGCGGCACCTCTGCAGGCTGGCCGTTGGGCTGGTGCGCTCCGCAGTGCCAAGTGTCCGACTCAACCCCAGTAAAGTTGCAGTAGAAGTCATCGCCCAACTCCGTTAAGCTCCCAGTCAATTCGAAATAGTCTTGCCTTTCACGGACTGCAGATACATCCTCATAGTGATGCGTCCTCTGCGTCTGAAACAAGTTTTTGCTCATATAAAACTGCCTAGCGTTTCTCAGTACGTACGTTACCAGTAAGTTCTTGTGGAGCTTGATGCCTCCTCTCTGCGTCCTGGAGCTTTGGATTTTCCTCAAAGAGATGGAGATCAGATTCTGTGCGTCAAATACACACTCCATCCTCACCCGGGCCTCCCGTTCTTTCCTCTCAGTCTCTCAAAACGTTTGTTTCTTCACTGAAGAAATATGTACGTCTTTAGTTGAGATTCCTACTGGATTCGTGTAGACTGTGTCCATGGCGCTCCATGTCTTCCCAGTAAGGGCATGGATTTGCAA
>TU78270
gtcagTTTTATTGATTAATAAAAGCAGGCCCtgatataaataatacatttaggtACAGAATGATATGCTGCCTGATGCATGAGGCTGTACAGATCTTTACTGGCCACATGATGGAGCTCGTCCAACATCCTTCCAGAGAAACAGTGTGAACTCATTTCTTCAGGAAATACAAACCAAAGACAGACCCCAGTACCCCCAGTTAAGTGAATCACCAGAAAATAAGGTTTAAAGAAGAGGTACAATTAATTTATACTTTGTGAAGACATGTAATCAGTTGGCACGAGAAGTGTTACATGTGCAAAAGTAATCCGAAATGAACAGGATTGCTCCATATAATCACATttcatcaacatttttttttaaataacagaggagaaagagaattGCAGTCATGGTTTATTTGAAAGCAATAAAATAATACgatacaaagaaaaacaatcatACAAATCAAAATGCTTCGATTGCTCTGGTCCAACCGCTGCCTGTTAACAGTGTatgttttaaacaaattgtcTGAGCGGCGAATATTTGCTCAAGGTCCGTCTGCTGCCAACTCACAAACTCAGATAGTCCACCTGAACCCAACACTGAGATCAGGTTGGAGATGTTTGTGCTGTCCAACTGGTCCGAGTCTGAATGTAAATCATCATCAGTCCTCATCCTTTTAAACGGCACTGGTCCAAAGTCTGGCAAGTAAAACTCTGGATCAACTATATGGTAACTTGTGTCCATCTTTCGCTTTTTAGTGTAGCACTGCGCGCCCTGCGGCTGTTTTGACTGCGCGCAACAGTCTGAGTGAAAGTATCCATTCGTGACAGTAGTCACCACATGCGTGTCCAAGTCCAGGACAGTCTTTTGGTTGGCTTGTGCGTTTAGGATAGGTAACTCCCAGGATGGTTTGTCTGCACAACTCCAACAGGCTTCCGAAAGCATGAGGTCTGAGTCACTTGGTGAAAGCATTGCGCAGGCAGATGCGTCTTGGTGCGGCACCTCTGCAGGCTGGCCGTTGGGCTGGTGCGCTCCGCAGTGCCAAGTGTCCGACTCAACCCCAGTAAAGTTGCAGTAGAAGTCATCGCCCAACTCCGTTAAGCTCCCAGTCAATTCGAAATAGTCTTGCCTTTCACGGACTGCAGATACATCCTCATAGTGATGCGTCCTCTGCGTCTGAAACAAGTTTTTGCTCATATAAAACTGCCTAGCGTTTCTCAGTACGTACGTTACCAGTAAGTTCTTGTGGAGCTTGATGCCTCCTCTCTGCGTCCTGGAGCTTTGGATTTTCCTCAAAGAGATGGAGATCAGATTCTGTGCGTCAAATACACACTCCATCCTCACCCGGGCCTCCCGTTCTTTCCTCTCAGTCTCTCAAAACGTTTGTTTCTTCACTGAAGAAATATGTACGTCTTTAGTTGAGATTCCTACTGGATTCGTGTAGACTGT

Function

symbol description
ier5l Is expressed in several structures, including midbrain neural keel; myotome; pectoral fin; periderm; and retina. Orthologous to human IER5L (immediate early response 5 like).

NR:

description
PREDICTED: immediate early response gene 5-like protein

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU78267 False 1048 lncRNA 0.47 1 1061418 1062465
TU78268 False 1093 lncRNA 0.47 1 1061418 1062510
TU78270 True 1437 lncRNA 0.44 1 1061029 1062465

Neighbor

gene id symbol gene type direction distance location
adamts13 adamts13 coding upstream 8746 1029257 ~ 1052283 (+)
zbtb34 zbtb34,LOC100694860,LOC102780544,LOC102300203 coding upstream 183212 870031 ~ 877817 (+)
mvb12bb LOC104950954 coding upstream 287816 732697 ~ 773213 (+)
pbx3b pbx3 coding upstream 467224 532813 ~ 593805 (+)
gapvd1 gapvd1,LOC102777314 coding upstream 628400 381172 ~ 432629 (+)
LOC120560446 LOC104936599 coding downstream 43454 1105964 ~ 1127084 (+)
si:dkeyp-14d3.1 tmem132c coding downstream 94960 1157470 ~ 1329623 (+)
glt1d1 glt1d1 coding downstream 309274 1371784 ~ 1396195 (+)
fzd10 fzd10 coding downstream 414578 1477088 ~ 1480626 (+)
piwil1 piwil1,LOC102785531 coding downstream 439080 1501590 ~ 1531972 (+)
G58209 crat,LOC107393635,LOC102215149,LOC101477431 non-coding upstream 7616 1053015 ~ 1053413 (+)
G58157 NA non-coding upstream 161523 898893 ~ 899506 (+)
G58156 NA non-coding upstream 168590 892097 ~ 892439 (+)
G58151 NA non-coding upstream 178778 879254 ~ 882251 (+)
G58057 NA non-coding upstream 488497 541890 ~ 572532 (+)
G58230 asb6 non-coding downstream 17099 1079609 ~ 1083228 (+)
G58237 NA non-coding downstream 50244 1112754 ~ 1113040 (+)
G58255 NA non-coding downstream 268536 1331046 ~ 1331338 (+)
G58256 NA non-coding downstream 269036 1331546 ~ 1331998 (+)
G58260 NA non-coding downstream 270991 1333501 ~ 1333883 (+)
lmx1bb lmx1b,LOC102213269,LOC100696266 other upstream 223168 789405 ~ 837861 (+)
LOC120560799 NA other upstream 848646 210742 ~ 212383 (+)
dock5 dock5 other downstream 1211168 2273678 ~ 2312665 (+)
lman2lb NA other downstream 1815864 2878374 ~ 2883861 (+)
LOC120560521 tjp2 other downstream 2372655 3435165 ~ 3522756 (+)
G59086 NA other downstream 3054769 4117279 ~ 4117631 (+)
G59172 sub1 other downstream 3361631 4424141 ~ 4429981 (+)

Expression


Co-expression Network