G58237


Basic Information

Item Value
gene id G58237
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 1112754 ~ 1113040 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU78297
gtttacatggtttaattttcaaaaaacaccatatttttgttgtactgcacagctctctctcactgctgcagatcctcttttcacctggtttctgttttagctacagagtgagacctcttttcatcttcttcttctgtactatctttgattgcactcgcacatgctcagtagttcagatgtagagcatgtcagctagctaactctagagacagtaaaagaaaggctgtttctccaactttggtcagttacaaggcaggattagctgggagacttctaaatgagggcac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU78297 True 287 lncRNA 0.41 1 1112754 1113040

Neighbor

gene id symbol gene type direction distance location
adamts13 adamts13 coding upstream 60471 1029257 ~ 1052283 (+)
zbtb34 zbtb34,LOC100694860,LOC102780544,LOC102300203 coding upstream 234937 870031 ~ 877817 (+)
mvb12bb LOC104950954 coding upstream 339541 732697 ~ 773213 (+)
pbx3b pbx3 coding upstream 518949 532813 ~ 593805 (+)
gapvd1 gapvd1,LOC102777314 coding upstream 680125 381172 ~ 432629 (+)
si:dkeyp-14d3.1 tmem132c coding downstream 44430 1157470 ~ 1329623 (+)
glt1d1 glt1d1 coding downstream 258744 1371784 ~ 1396195 (+)
fzd10 fzd10 coding downstream 364048 1477088 ~ 1480626 (+)
piwil1 piwil1,LOC102785531 coding downstream 388550 1501590 ~ 1531972 (+)
LOC120560673 LOC107389948 coding downstream 551944 1664984 ~ 1667532 (+)
G58230 asb6 non-coding upstream 29526 1079609 ~ 1083228 (+)
G58215 ier5l,LOC103375736 non-coding upstream 50244 1061029 ~ 1062510 (+)
G58209 crat,LOC107393635,LOC102215149,LOC101477431 non-coding upstream 59341 1053015 ~ 1053413 (+)
G58157 NA non-coding upstream 213248 898893 ~ 899506 (+)
G58156 NA non-coding upstream 220315 892097 ~ 892439 (+)
G58255 NA non-coding downstream 218006 1331046 ~ 1331338 (+)
G58256 NA non-coding downstream 218506 1331546 ~ 1331998 (+)
G58260 NA non-coding downstream 220461 1333501 ~ 1333883 (+)
G58269 NA non-coding downstream 243810 1356850 ~ 1357249 (+)
G58286 NA non-coding downstream 363634 1476674 ~ 1562520 (+)
lmx1bb lmx1b,LOC102213269,LOC100696266 other upstream 274893 789405 ~ 837861 (+)
LOC120560799 NA other upstream 900371 210742 ~ 212383 (+)
dock5 dock5 other downstream 1160638 2273678 ~ 2312665 (+)
lman2lb NA other downstream 1765334 2878374 ~ 2883861 (+)
LOC120560521 tjp2 other downstream 2322125 3435165 ~ 3522756 (+)
G59086 NA other downstream 3004239 4117279 ~ 4117631 (+)
G59172 sub1 other downstream 3311101 4424141 ~ 4429981 (+)

Expression


Co-expression Network