Gene
RNA
| Item | Value |
|---|---|
| gene id | G58384 |
| gene name | NA |
| gene type | non-coding |
| species | eurasian perch (Perca fluviatilis) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_053117.1 |
| NCBI id | CM020914.1 |
| chromosome length | 43979800 |
| location | 2062620 ~ 2063002 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU78508 | False | 266 | lncRNA | 0.47 | 1 | 2062691 | 2062956 |
| TU78509 | True | 337 | lncRNA | 0.46 | 1 | 2062620 | 2062956 |
| TU78510 | False | 312 | lncRNA | 0.45 | 1 | 2062691 | 2063002 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| ccdc92 | ccdc92 | coding | upstream | 8139 | 2037572 ~ 2054481 (+) |
| ncor2 | ncor2 | coding | upstream | 113905 | 1804636 ~ 1948715 (+) |
| ep400 | ep400 | coding | upstream | 290947 | 1736678 ~ 1771673 (+) |
| ulk1a | NA | coding | upstream | 327005 | 1721805 ~ 1735615 (+) |
| adgrd1 | adgrd1 | coding | upstream | 341727 | 1680081 ~ 1720893 (+) |
| kctd9a | kctd9 | coding | downstream | 77095 | 2140097 ~ 2156589 (+) |
| LOC120560792 | gnrh1 | coding | downstream | 94610 | 2157612 ~ 2160627 (+) |
| klhl22 | klhl22 | coding | downstream | 129910 | 2192912 ~ 2203066 (+) |
| LOC120560154 | nefl,LOC102797482,LOC104959585 | coding | downstream | 199907 | 2262909 ~ 2266743 (+) |
| LOC120561412 | lrrtm4,LOC104959581,LOC103353625,LOC101488074,LOC100703069,LOC102799547 | coding | downstream | 302748 | 2365750 ~ 2434942 (+) |
| G58383 | NA | non-coding | upstream | 51 | 2062074 ~ 2062569 (+) |
| G58372 | NA | non-coding | upstream | 111348 | 1933007 ~ 1951272 (+) |
| G58347 | NA | non-coding | upstream | 334287 | 1701907 ~ 1728333 (+) |
| G58286 | NA | non-coding | upstream | 500100 | 1476674 ~ 1562520 (+) |
| G58269 | NA | non-coding | upstream | 705371 | 1356850 ~ 1357249 (+) |
| G58390 | lgi3 | non-coding | downstream | 4583 | 2067585 ~ 2071483 (+) |
| G58382 | NA | non-coding | downstream | 11818 | 2074820 ~ 2089793 (+) |
| G58478 | NA | non-coding | downstream | 68946 | 2131948 ~ 2132274 (+) |
| G58574 | NA | non-coding | downstream | 373382 | 2436384 ~ 2437472 (+) |
| G58597 | NA | non-coding | downstream | 460437 | 2523439 ~ 2523638 (+) |
| lmx1bb | lmx1b,LOC102213269,LOC100696266 | other | upstream | 1224759 | 789405 ~ 837861 (+) |
| LOC120560799 | NA | other | upstream | 1850237 | 210742 ~ 212383 (+) |
| dock5 | dock5 | other | downstream | 210676 | 2273678 ~ 2312665 (+) |
| lman2lb | NA | other | downstream | 815372 | 2878374 ~ 2883861 (+) |
| LOC120560521 | tjp2 | other | downstream | 1372163 | 3435165 ~ 3522756 (+) |
| G59086 | NA | other | downstream | 2054277 | 4117279 ~ 4117631 (+) |
| G59172 | sub1 | other | downstream | 2361139 | 4424141 ~ 4429981 (+) |
