G58560


Basic Information

Item Value
gene id G58560
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 2334746 ~ 2335022 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU78726
CATTATTGGCAGGGTCGCATTAACCCAGCACTTGGTTTCCTGATGACAAACGTCACGCTCTGTGCTCACATCACTTACTGTACACTCTCACCACATCAAAAcggaaaatttcacttcatccAACTTCATCGGCAGCATCACAgtcagacccacatccagatgctGGGAattcaccattggcagggctcaatccgaggggcgggataaacggttgtctttcaaattccctctgcacgcaataggatagcactacaaccaaccagagcaacgctagttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU78726 True 277 lncRNA 0.49 1 2334746 2335022

Neighbor

gene id symbol gene type direction distance location
vsig8b NA coding downstream 3923 2324986 ~ 2330823 (-)
LOC120560449 NA coding downstream 15470 2318287 ~ 2319276 (-)
cabin1 cabin1 coding downstream 71932 2217592 ~ 2262814 (-)
tbx16 LOC104928806,LOC103353632 coding downstream 118035 2207405 ~ 2216711 (-)
npy8br LOC104958550,LOC104939448 coding downstream 154859 2178275 ~ 2179887 (-)
lrrtm4l2 LOC104959582,LOC103353626 coding upstream 18051 2353073 ~ 2356270 (-)
LOC120560021 NA coding upstream 169450 2504472 ~ 2508814 (-)
LOC120560452 LOC104959125 coding upstream 202196 2537218 ~ 2537559 (-)
LOC120560454 NA coding upstream 216406 2551428 ~ 2552694 (-)
ggt5a ggt5 coding upstream 284193 2619215 ~ 2627761 (-)
G58559 NA non-coding downstream 557 2333979 ~ 2334189 (-)
LOC120561446 NA non-coding downstream 152018 2179896 ~ 2182728 (-)
G58529 NA non-coding downstream 161426 2172439 ~ 2173320 (-)
G58521 NA non-coding downstream 188194 2146122 ~ 2146552 (-)
G58460 NA non-coding downstream 271807 2062670 ~ 2062939 (-)
G58588 NA non-coding upstream 141250 2476272 ~ 2479608 (-)
LOC120561196 NA non-coding upstream 156245 2491267 ~ 2491794 (-)
G58596 NA non-coding upstream 182933 2517955 ~ 2518201 (-)
G58625 NA non-coding upstream 221623 2556645 ~ 2556863 (-)
G58678 NA non-coding upstream 380879 2715901 ~ 2716316 (-)
ankrd39 LOC103353637,LOC100700369 other downstream 195103 2137796 ~ 2139643 (-)
rimbp2 rimbp2,LOC107081823,LOC108247306,LOC103353655 other downstream 676698 1532053 ~ 1658048 (-)
LOC120560045 NA other downstream 2309797 17589 ~ 24949 (-)
LOC120560995 NA other upstream 215024 2550046 ~ 2551366 (-)
ggt1a ggt1,LOC102775580,LOC108234964 other upstream 242853 2577875 ~ 2592746 (-)
si:ch211-107p11.3 LOC103353652,LOC102075650,LOC108234931,LOC104950460 other upstream 350869 2685891 ~ 2689087 (-)
LOC120561394 LOC107097799,LOC103353613,LOC101077666 other upstream 355588 2690610 ~ 2692543 (-)
LOC120561349 donson,LOC102310661 other upstream 499166 2834188 ~ 2846607 (-)

Expression


Co-expression Network